BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021885
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]   348   1e-93
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   332   8e-89
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   330   3e-88
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   322   6e-86
ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83

>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score =  348 bits (893), Expect = 1e-93
 Identities = 178/320 (55%), Positives = 233/320 (72%), Gaps = 4/320 (1%)
 Frame = +1

Query: 1   DEEAHFQAIKSEYKNFNKFVSKKRMKDDEGRVEMLGKPWXXXXXXXXXXXXNFNNGVEK- 177
           +EEAHF+ +K EY   +K +             M+GKPW              N  VE  
Sbjct: 65  NEEAHFRTLKREYTKLSKAL-------------MVGKPWERPGFKEI-----LNGSVEYG 106

Query: 178 -DKLKPEHLKELGHLLQVERDKFKWLLDDDIELGQEGLLDGEKTEWVRPKRRGGDLEAMK 354
            ++LK EHL+EL  +L+ +R + +WLLDDD+E+ ++G    E+  W   +RRGGD +A++
Sbjct: 107 GERLKREHLRELSEILE-KRGEVRWLLDDDVEV-EQGSSGNERRGWSPARRRGGDADAIR 164

Query: 355 FLVNKLSETRLTVKDWKFGRMMKQSELPFTEVQLVKILEMLGEKGQWSHALSVVEWVYNS 534
           FLV++L+   +T++DWKF R+MKQS L FTE QL++I+E LG +G W HALSVVEWVY  
Sbjct: 165 FLVDRLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTD 224

Query: 535 KD--HKLYKSRFVYTKLLAVLGKTRKPDEALRIFNLMCGDYHIYPDMAAYHSIAVTLGQA 708
           KD  ++ YKSRFVYTKLLAVLGK ++P EAL IFNLM GD HIYPDMAAYHS+AVTLGQA
Sbjct: 225 KDKDNRRYKSRFVYTKLLAVLGKAKRPHEALDIFNLMRGDCHIYPDMAAYHSVAVTLGQA 284

Query: 709 GYLKELVSIVERMKQKPLRKIKHLRWKNWDPVLQPDVVIYNAILNACVASRQWKGVSWVI 888
           G LKEL++I+E M+QKP ++IK++  KNW+ +L+PDVVI+NA+LNACV ++QWKGVSWV 
Sbjct: 285 GLLKELLNIIECMRQKPPKRIKNMCRKNWNALLEPDVVIFNAVLNACVPTQQWKGVSWVF 344

Query: 889 DQMRKGGLKPNGATYGLAME 948
            Q+RK  LKPNGATYGLAME
Sbjct: 345 KQLRKCSLKPNGATYGLAME 364


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  332 bits (851), Expect = 8e-89
 Identities = 170/316 (53%), Positives = 220/316 (69%), Gaps = 1/316 (0%)
 Frame = +1

Query: 4    EEAHFQAIKSEYKNFNKFVSKKRMKDDEGRVEMLGKPWXXXXXXXXXXXXNFNNGVEKDK 183
            EE HF  ++SEYK F+K +  K      G + M+G+PW                G  +D 
Sbjct: 77   EETHFLTLRSEYKEFSKAIEAK----PAGGL-MVGRPWERLERVNFKELTGVRTGYNRDS 131

Query: 184  LKPEHLKELGHLLQVER-DKFKWLLDDDIELGQEGLLDGEKTEWVRPKRRGGDLEAMKFL 360
            LK E L+EL  L +  + ++ +W LDDD+EL +E L + E   +   KRR GD E ++FL
Sbjct: 132  LKKESLRELRKLFETRKLEESQWALDDDVELKEEWL-ESENDRYDVVKRRRGDGEVIRFL 190

Query: 361  VNKLSETRLTVKDWKFGRMMKQSELPFTEVQLVKILEMLGEKGQWSHALSVVEWVYNSKD 540
            V++LS   ++++DWKF RMM +S L F E QL+KIL+ LG KG W  ALSVVEWVYN K 
Sbjct: 191  VDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKS 250

Query: 541  HKLYKSRFVYTKLLAVLGKTRKPDEALRIFNLMCGDYHIYPDMAAYHSIAVTLGQAGYLK 720
            H   KSRFVYTKLLAVLG  RKP EAL+IFNLM GD  IYPDMAAYHSIAVTLGQAG LK
Sbjct: 251  HSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLK 310

Query: 721  ELVSIVERMKQKPLRKIKHLRWKNWDPVLQPDVVIYNAILNACVASRQWKGVSWVIDQMR 900
            +L+ ++E M+Q+P +K+++   K+WDP ++PD+VIYNAILNAC+ + +WKGV WV  Q+R
Sbjct: 311  QLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLR 370

Query: 901  KGGLKPNGATYGLAME 948
            K GL+PNGATYGL+ME
Sbjct: 371  KSGLRPNGATYGLSME 386


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  330 bits (846), Expect = 3e-88
 Identities = 169/320 (52%), Positives = 223/320 (69%), Gaps = 4/320 (1%)
 Frame = +1

Query: 1    DEEAHFQAIKSEYKNFNKFVSKKRMKDDEGRVE---MLGKPWXXXXXXXXXXXXNFNNGV 171
            +EE HFQ +K EYK F +      +++++G  +   ++GKPW              N   
Sbjct: 77   EEEQHFQELKHEYKQFTQ-----NLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEH 131

Query: 172  EKDKLKPEHLKELGHLLQVER-DKFKWLLDDDIELGQEGLLDGEKTEWVRPKRRGGDLEA 348
              +KLK E L EL  + +  + D+ KW+ +DDIE+ +    +    +  +  +R  +++ 
Sbjct: 132  RGEKLKRESLIELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKRS-EVQV 190

Query: 349  MKFLVNKLSETRLTVKDWKFGRMMKQSELPFTEVQLVKILEMLGEKGQWSHALSVVEWVY 528
            ++FLV++L +  +  KDWKF R+MK S L FTE QL+ I+EMLG K  W  ALSVV+WVY
Sbjct: 191  VRFLVDRLCDKEIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQWVY 250

Query: 529  NSKDHKLYKSRFVYTKLLAVLGKTRKPDEALRIFNLMCGDYHIYPDMAAYHSIAVTLGQA 708
            NSKDH+ ++SRFVYTKLLAVLGK R+P EAL+IFN+M G+  +YPDMAAYHSIAVTLGQA
Sbjct: 251  NSKDHRKFQSRFVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLGQA 310

Query: 709  GYLKELVSIVERMKQKPLRKIKHLRWKNWDPVLQPDVVIYNAILNACVASRQWKGVSWVI 888
            G LKEL++IVE M+QKP   +K++  KNWDP L+PDVVIYNA+LNACV S+QWKGVSWV 
Sbjct: 311  GLLKELLNIVECMRQKP-ETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGVSWVF 369

Query: 889  DQMRKGGLKPNGATYGLAME 948
             QMRK  LKPNGATYGLAME
Sbjct: 370  QQMRKSSLKPNGATYGLAME 389


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  322 bits (826), Expect = 6e-86
 Identities = 165/317 (52%), Positives = 220/317 (69%), Gaps = 2/317 (0%)
 Frame = +1

Query: 4    EEAHFQAIKSEYKNFNKFVSKKRMKDDEGRVEMLGKPWXXXXXXXXXXXXNFNNGVEKDK 183
            EE+HFQ + SEY+ F K +  +      G   ++G+PW            + +N    +K
Sbjct: 203  EESHFQTLTSEYRTFTKAIKGETRSSTSGL--LVGRPWERIERVKLREIVSGSNQFNGNK 260

Query: 184  LKPEHLKELGHLLQVERDKFKWLLDDDIEL--GQEGLLDGEKTEWVRPKRRGGDLEAMKF 357
            L  E L+EL    +   D   W+LD+DIEL    + L    + ++   KRR  D E ++F
Sbjct: 261  LNVESLRELKENFE---DGLNWVLDNDIELENNDDWLSSENQWQYDPAKRRRNDKEEIRF 317

Query: 358  LVNKLSETRLTVKDWKFGRMMKQSELPFTEVQLVKILEMLGEKGQWSHALSVVEWVYNSK 537
            LV++LS+  +TV+DWK  ++MKQS L F+E QL+KI+E LG KG+W  A++VVEWVYN K
Sbjct: 318  LVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKIVEGLGNKGKWEQAMAVVEWVYNDK 377

Query: 538  DHKLYKSRFVYTKLLAVLGKTRKPDEALRIFNLMCGDYHIYPDMAAYHSIAVTLGQAGYL 717
            + +  KSRFVYTKLL+VL   R+P EALRIFN M  D+++YPDMAAYH IAVTLGQAG L
Sbjct: 378  ERRDSKSRFVYTKLLSVLRIERRPKEALRIFNSMREDHNLYPDMAAYHVIAVTLGQAGNL 437

Query: 718  KELVSIVERMKQKPLRKIKHLRWKNWDPVLQPDVVIYNAILNACVASRQWKGVSWVIDQM 897
            KEL+ IVE MKQ+P ++I  + +K WDPVL+PD+VIYNA+LNACV ++QWKGV+WV +Q+
Sbjct: 438  KELLKIVECMKQQPSKRINKMCYKRWDPVLEPDIVIYNAVLNACVPTQQWKGVAWVFEQL 497

Query: 898  RKGGLKPNGATYGLAME 948
            RK GLKPNGATYGLAME
Sbjct: 498  RKSGLKPNGATYGLAME 514


>ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|222853797|gb|EEE91344.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  313 bits (803), Expect = 3e-83
 Identities = 159/284 (55%), Positives = 204/284 (71%), Gaps = 1/284 (0%)
 Frame = +1

Query: 100 MLGKPWXXXXXXXXXXXXNFNNGVEKDKLKPEHLKELGHLLQVERDKFKWLLDDDIEL-G 276
           ++GKPW            + +      KLK E+L++L  + +      KW+ DDDI++  
Sbjct: 1   LVGKPWERIERVKLKEIGSGSREFNGGKLKRENLRQLKEVFE---GNLKWVFDDDIDVED 57

Query: 277 QEGLLDGEKTEWVRPKRRGGDLEAMKFLVNKLSETRLTVKDWKFGRMMKQSELPFTEVQL 456
            + L  G + +W   KR  G+ EA++FLV++LS   ++VKDWK  ++MKQS L F+E QL
Sbjct: 58  SDWLRSGSEEKWDPAKRWRGEGEAIRFLVDRLSCREVSVKDWKLAKIMKQSGLRFSEGQL 117

Query: 457 VKILEMLGEKGQWSHALSVVEWVYNSKDHKLYKSRFVYTKLLAVLGKTRKPDEALRIFNL 636
           +KI+E LG KG+WS A++VVEWVYN K+ +  KSRFVYTKLL+VLGK R+  EAL IFNL
Sbjct: 118 LKIVEELGNKGKWSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNL 177

Query: 637 MCGDYHIYPDMAAYHSIAVTLGQAGYLKELVSIVERMKQKPLRKIKHLRWKNWDPVLQPD 816
           M  D  IYPDMAAYHSIAVTLGQ G LKELV ++E M+QKP ++I  +  KNWDPVL+PD
Sbjct: 178 MREDRRIYPDMAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPD 237

Query: 817 VVIYNAILNACVASRQWKGVSWVIDQMRKGGLKPNGATYGLAME 948
           +VIYNAILNACV S+QWKGVSWV  Q+R+ GLKPNGATYGLAME
Sbjct: 238 LVIYNAILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAME 281