BLASTX nr result

ID: Bupleurum21_contig00021849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021849
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   129   2e-28
emb|CBI26021.3| unnamed protein product [Vitis vinifera]              124   1e-26
gb|ACN85308.1| unknown [Oryza ridleyi]                                 76   2e-12
ref|XP_002437611.1| hypothetical protein SORBIDRAFT_10g030490 [S...    75   4e-12
ref|NP_001068022.1| Os11g0533800 [Oryza sativa Japonica Group] g...    75   6e-12

>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  129 bits (324), Expect = 2e-28
 Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 10/174 (5%)
 Frame = -3

Query: 509  MQQRLKGPIMKSIVISFPLSKEHESHITSWIRSAVMLGVEKINLDLT----------GGA 360
            M  R +GP + S  I FPL KE  SHI  WI  AVM GVE I+LDL+            +
Sbjct: 1401 MYYRSQGPKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTS 1460

Query: 359  PVPPRGYTFPLSVLAAPGKPCIVKHLRLAWCSLGSVSISDSLASLVTVELHHVHFTDQHL 180
                + Y FP  + + PG  C +KHLRLA C L ++  S++L SL+TV+L  V+ +DQ L
Sbjct: 1461 STAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQL 1520

Query: 179  SVMLCNCLSLEKMALKSCPYLVNFKLTGGNSKLRYLSIKSCFRLTNIEFDTQNL 18
              +L  C  LE+++L  C  LVN   +  N +L++LSIK+CFRL  IE    +L
Sbjct: 1521 QDLLSTCSHLERLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADL 1574


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  124 bits (310), Expect = 1e-26
 Identities = 72/174 (41%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
 Frame = -3

Query: 509 MQQRLKGPIMKSIVISFPLSKEHESHITSWIRSAVMLGVEKINLDLT----------GGA 360
           M  R +G  + S  I FPL KE  SHI  WI  AVM GVE I+LDL+            +
Sbjct: 99  MYYRSQGRKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTS 158

Query: 359 PVPPRGYTFPLSVLAAPGKPCIVKHLRLAWCSLGSVSISDSLASLVTVELHHVHFTDQHL 180
               + Y FP  + + PG  C +KHLRLA C L ++  S++L SL+TV+L  V+ +DQ L
Sbjct: 159 STAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQL 218

Query: 179 SVMLCNCLSLEKMALKSCPYLVNFKLTGGNSKLRYLSIKSCFRLTNIEFDTQNL 18
             +L  C  LE ++L  C  LVN   +  N +L++LSIK+CFRL  IE    +L
Sbjct: 219 QDLLSTCSHLEWLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADL 272


>gb|ACN85308.1| unknown [Oryza ridleyi]
          Length = 330

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
 Frame = -3

Query: 512 LMQQRLKGPIMKSIVISFPLSKEHESHITSWIRSAVMLGVEKINLDLTGGAPVPPRG--- 342
           L+Q     P +   V+ F L ++H  H+  W+R       + IN D T G     RG   
Sbjct: 48  LLQHLCSPPTLNKFVVKFGLRRKHTCHVDRWVRLCATSRAKHINFDFTPGVKGIFRGLAD 107

Query: 341 --YTFPLSVLAAP-GKPCIVKHLRLAW-CSLGSVSISDSLASLVTVELHHVHFTDQHLSV 174
             Y FPL V + P   P  +K L L + C   + S S   A+L  + LH V F       
Sbjct: 108 DKYIFPLGVFSGPDSSPSNIKSLHLGYVCLNAATSGSAGFANLKKLTLHKVSFLSDFNCF 167

Query: 173 MLCNCLSLEKMALKSCPYLVNFKLTGGNSKLRYLSIKSCFRLTNIEFDTQNLEVLEL 3
           +L  C +LE +++ SC       L     +LRYL +  C+ L  IE +  NL   +L
Sbjct: 168 VLSECTALEWLSI-SCSSFTELALCKPLRRLRYLCLHYCY-LKKIELEAPNLTSFDL 222


>ref|XP_002437611.1| hypothetical protein SORBIDRAFT_10g030490 [Sorghum bicolor]
           gi|241915834|gb|EER88978.1| hypothetical protein
           SORBIDRAFT_10g030490 [Sorghum bicolor]
          Length = 443

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
 Frame = -3

Query: 482 MKSIVISF-PLSKEHESHITSWIRSAVMLGVEKINLDLTGGAPVPPRG--YTFPLSVLAA 312
           +K++ I F     +  S++ +W+  A+   +E++ LDL       PR   Y+FP S+L+ 
Sbjct: 59  LKTLKIDFCDYKADTYSYLNNWLEIAITPELEELTLDLF------PRKAKYSFPCSLLSN 112

Query: 311 PGKPCIVKHLRLAWCSLGSVSISDSLASLVTVELHHVHFTDQHLSVMLCNCLSLEKMALK 132
            G+   ++HL+L WC+  +    D L +L ++ LH VH T   L  +  +  +LE++ L 
Sbjct: 113 -GRGNSLRHLKLVWCAFSNTVGLDCLKNLTSLHLHDVHITGNELGCLFSSSSALERLELH 171

Query: 131 SCPYLVNFKLTGGNSKLRYLSIKSCFRLTNIEFDTQNLEVLEL 3
            C  +V  ++     +LRYL +  C RL  IE    N+    L
Sbjct: 172 GCHKIVRLEIPCLLQRLRYLGVFVCERLKVIESKAPNISSFHL 214


>ref|NP_001068022.1| Os11g0533800 [Oryza sativa Japonica Group]
           gi|77551273|gb|ABA94070.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113645244|dbj|BAF28385.1| Os11g0533800 [Oryza sativa
           Japonica Group] gi|215697675|dbj|BAG91669.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 474

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
 Frame = -3

Query: 464 SFPLSKEHESH-----ITSWIRSAVMLGVEKINLDLTGGAPVPPRG--YTFPLSVLAAPG 306
           SF L +   +H     I  WI  AV  G  ++ +DL+      PR   Y+FP S +AAP 
Sbjct: 103 SFTLKRNLNNHKYAHYIDRWIYFAVRSGANELTIDLSPRWYAHPRDVKYSFPSSNVAAP- 161

Query: 305 KPCIVKHLRLAWCSLGSVSISDSLASLVTVELHHVHFTDQHLSVMLCNCLSLEKMALKSC 126
           +P  ++HL+L + +L  +     L SL T++L  V  T + L  +L    +L+++ L+ C
Sbjct: 162 EPTSIEHLKLCFMNLRPLPTFSGLRSLKTLDLALVCITTEDLESLLSYTPALQQLKLRQC 221

Query: 125 PYLVNFKLTGGNSKLRYLSIKSCFRLTNIEFDTQNL 18
           P L   K+T   +KL Y+ I  C  L  +E   QNL
Sbjct: 222 PMLEYLKITDVLAKLVYIDIVPCLWLKILEIHAQNL 257


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