BLASTX nr result

ID: Bupleurum21_contig00021815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021815
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95981.1| unknown [Populus trichocarpa]                          382   e-104
ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
gb|AFK36343.1| unknown [Lotus japonicus]                              373   e-101
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   372   e-101

>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  382 bits (982), Expect = e-104
 Identities = 163/240 (67%), Positives = 199/240 (82%)
 Frame = -3

Query: 756 GRLLMMEVKPTFGIGVASSIQTFKHELWPLDDIDPKNTKFPCCLVWTPLPVVSWLAPFIG 577
           G+   M++K  + +   SS    +HELWPLD IDPK  KFPCCL+WTPLPVVSWLAPFIG
Sbjct: 4   GQFSAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIG 63

Query: 576 HVGICKEDGTIIDFSGSNLISVDDFAYGAVARYIQLDREKCCFPPNLGGHTCKHRYNHTQ 397
           HVGIC+EDGTI+DFSGSN ++VDDF++GA ARY QLDRE+CCFPPNL GHTCKH Y H++
Sbjct: 64  HVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQCCFPPNLTGHTCKHGYKHSE 123

Query: 396 YGSAMTWDDAIQSSVRQFEHKSYNLFTCNCHSFVANCLNRLCYDDSLSWNMINVAALVLC 217
           YG+A+TWDDA+QSS+R F+HK+YNLFTCNCHSFVANCLNRLCY  S+ WNMI+VA L+L 
Sbjct: 124 YGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILF 183

Query: 216 KGQWVDTLSVIRSFFPITLMLCLGMIVVGWPFLIGLVSFSVLLVCWFVLGTYFVKSLFEC 37
           KG W+D  S++RSF P  + LC+G+ +VGWPFL+GL SFS+LL+ WF+LGTY  KSL EC
Sbjct: 184 KGHWIDWKSIVRSFLPFAVALCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 243


>ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  381 bits (978), Expect = e-103
 Identities = 161/235 (68%), Positives = 198/235 (84%)
 Frame = -3

Query: 741 MEVKPTFGIGVASSIQTFKHELWPLDDIDPKNTKFPCCLVWTPLPVVSWLAPFIGHVGIC 562
           M++K  F +   SS    +H+LWPLD IDPK  KFPCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAFDVEHMSSTSRIQHDLWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 561 KEDGTIIDFSGSNLISVDDFAYGAVARYIQLDREKCCFPPNLGGHTCKHRYNHTQYGSAM 382
           +EDGTI+DFSGSN ++VDDF +GA ARY+QLDRE+CCFPPNL GHTCKH Y H++YG+A+
Sbjct: 61  REDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQCCFPPNLAGHTCKHGYKHSEYGTAI 120

Query: 381 TWDDAIQSSVRQFEHKSYNLFTCNCHSFVANCLNRLCYDDSLSWNMINVAALVLCKGQWV 202
           TWDDA+QSS R FEHK+YNLFTCNCHSFVA+CLNR CY  S+ WN+I+VA L+L KG W+
Sbjct: 121 TWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNRFCYGGSMDWNLIDVAVLILFKGHWI 180

Query: 201 DTLSVIRSFFPITLMLCLGMIVVGWPFLIGLVSFSVLLVCWFVLGTYFVKSLFEC 37
           D  S+I+SF P T++LCLG+++VGWPFL+GL SF++LL+ WF+LGTY  KSL EC
Sbjct: 181 DWKSIIKSFLPFTIVLCLGIVLVGWPFLVGLFSFTLLLMGWFLLGTYCFKSLLEC 235


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  376 bits (965), Expect = e-102
 Identities = 162/239 (67%), Positives = 198/239 (82%), Gaps = 4/239 (1%)
 Frame = -3

Query: 741 MEVKPTFGIGVASSIQTFKHELWPLDDIDPKNTKFPCCLVWTPLPVVSWLAPFIGHVGIC 562
           M++K  + +   SS    +HELWPLD IDPK  KFPCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 561 KEDGTIIDFSGSNLISVDDFAYGAVARYIQLDREK----CCFPPNLGGHTCKHRYNHTQY 394
           +EDGTI+DFSGSN ++VDDF++GA ARY QLDRE+    CCFPPNL GHTCKH Y H++Y
Sbjct: 61  REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQGTGQCCFPPNLTGHTCKHGYKHSEY 120

Query: 393 GSAMTWDDAIQSSVRQFEHKSYNLFTCNCHSFVANCLNRLCYDDSLSWNMINVAALVLCK 214
           G+A+TWDDA+QSS+R F+HK+YNLFTCNCHSFVANCLNRLCY  S+ WNMI+VA L+L K
Sbjct: 121 GTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFK 180

Query: 213 GQWVDTLSVIRSFFPITLMLCLGMIVVGWPFLIGLVSFSVLLVCWFVLGTYFVKSLFEC 37
           G W+D  S++RSF P  ++LC+G+ +VGWPFL+GL SFS+LL+ WF+LGTY  KSL EC
Sbjct: 181 GHWIDWKSIVRSFLPFAVVLCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 239


>gb|AFK36343.1| unknown [Lotus japonicus]
          Length = 245

 Score =  373 bits (958), Expect = e-101
 Identities = 159/235 (67%), Positives = 199/235 (84%)
 Frame = -3

Query: 741 MEVKPTFGIGVASSIQTFKHELWPLDDIDPKNTKFPCCLVWTPLPVVSWLAPFIGHVGIC 562
           ME+  ++ I  + S Q  +HELWPLD IDPK  KFPCCLVW PLPVVSWLAPFIGH+GIC
Sbjct: 7   MELNSSYDIEHSHSTQRIQHELWPLDPIDPKKAKFPCCLVWNPLPVVSWLAPFIGHIGIC 66

Query: 561 KEDGTIIDFSGSNLISVDDFAYGAVARYIQLDREKCCFPPNLGGHTCKHRYNHTQYGSAM 382
           KEDG ++DFSGS ++SVDDFA+G VARY+QLDR +CCFPPNL  HTCKH Y H++YG+A+
Sbjct: 67  KEDGAVLDFSGSYILSVDDFAFGPVARYLQLDRRQCCFPPNLSAHTCKHGYQHSEYGTAI 126

Query: 381 TWDDAIQSSVRQFEHKSYNLFTCNCHSFVANCLNRLCYDDSLSWNMINVAALVLCKGQWV 202
           TWDDA+QSS R FE+K++NLFTCNCHSFVANCLNRLCY  S+SWNM++V AL+L KG WV
Sbjct: 127 TWDDALQSSSRYFENKTHNLFTCNCHSFVANCLNRLCYGGSMSWNMVSVGALILFKGSWV 186

Query: 201 DTLSVIRSFFPITLMLCLGMIVVGWPFLIGLVSFSVLLVCWFVLGTYFVKSLFEC 37
           D  SVIR+F P  +++C+G+++VGWPFL+GL+SFS+LL+ WF++GTY VK+L EC
Sbjct: 187 DFRSVIRAFLPFVVVVCIGVLMVGWPFLLGLLSFSLLLMGWFLVGTYLVKNLLEC 241


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  372 bits (956), Expect = e-101
 Identities = 159/236 (67%), Positives = 197/236 (83%)
 Frame = -3

Query: 744 MMEVKPTFGIGVASSIQTFKHELWPLDDIDPKNTKFPCCLVWTPLPVVSWLAPFIGHVGI 565
           MME+  ++ I      +  +H+LWPLD IDPKN KFPCCLVW PLPVVSWLAPFIGHVGI
Sbjct: 1   MMELNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGI 60

Query: 564 CKEDGTIIDFSGSNLISVDDFAYGAVARYIQLDREKCCFPPNLGGHTCKHRYNHTQYGSA 385
           C+EDGT++DFSGS  ++VDDFA+G VARY++LDR +CCFPPNL GHTCKH Y HT+YG+A
Sbjct: 61  CREDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKHGYRHTEYGTA 120

Query: 384 MTWDDAIQSSVRQFEHKSYNLFTCNCHSFVANCLNRLCYDDSLSWNMINVAALVLCKGQW 205
           +TWDDA+++S+R FE K+YNLFTCNCHSFVAN LNRLCY  S+SWNM+NV  L+L KG W
Sbjct: 121 ITWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKGHW 180

Query: 204 VDTLSVIRSFFPITLMLCLGMIVVGWPFLIGLVSFSVLLVCWFVLGTYFVKSLFEC 37
           VD  SV+RSF P  +++C+G+ +VGWPFL+GL+SFS+LL+ WF+LGTY VKSL EC
Sbjct: 181 VDFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLEC 236


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