BLASTX nr result

ID: Bupleurum21_contig00021814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021814
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   506   e-141
ref|NP_566136.1| armadillo/beta-catenin-like repeat-containing p...   500   e-139
gb|AAM64910.1| unknown [Arabidopsis thaliana]                         499   e-139
gb|AAL16172.1|AF428404_1 AT3g01400/T13O15_4 [Arabidopsis thalian...   496   e-138
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   494   e-137

>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  506 bits (1302), Expect = e-141
 Identities = 269/345 (77%), Positives = 300/345 (86%)
 Frame = -1

Query: 1364 NFSYMGRNFDDSLSINDSSTAFSDCDSDRSGEFSTASSQSRRLLTACASGNSDDLIDQLV 1185
            NF+YMGR FDD LS  DSS AFSDC+SDRSGEF TASSQSRRLL ACAS NSD+LI  LV
Sbjct: 8    NFTYMGRTFDD-LSNGDSSGAFSDCNSDRSGEFPTASSQSRRLLIACASDNSDELIRHLV 66

Query: 1184 AGLDSGSIEDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQEYGVTAI 1005
              L+S SIE+QK AAME+RLLAKNKPENR+KIA+AGA+RP            QEYGVTAI
Sbjct: 67   LDLESCSIEEQKQAAMEIRLLAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVTAI 126

Query: 1004 LNLSLCDENKEAIASAGAIKPLVKALRIGNPTAKENAACALLRLSQIEDNKVAIGRSGAI 825
            LNLSLCDENKE IA++GAIKPLV+AL  G PTAKENAACALLRLSQ+E+NK+AIGRSGAI
Sbjct: 127  LNLSLCDENKELIAASGAIKPLVRALMSGTPTAKENAACALLRLSQMEENKIAIGRSGAI 186

Query: 824  PLLVNLLETGNLRGKKDASTALYSLCSVRENKIRAIECGIMKPLVELMADFGSNMVDKSG 645
            PLLVNLLE G  RGKKDASTALYSLCSV+ENKIRA++ GIM+PLVELMADFGSNMVDKS 
Sbjct: 187  PLLVNLLENGGFRGKKDASTALYSLCSVKENKIRAVKAGIMRPLVELMADFGSNMVDKSA 246

Query: 644  FVLSLLVSLPEARAAVVEEGGIPVLVEIVEVGSHRQKEIAAAILLRLCEDSSVYRTMVAR 465
            FVLS+LVS+ EAR+A+VEEGGIPVLVE+VE G+ RQKEIAA ILL++CEDS +YRTMVAR
Sbjct: 247  FVLSVLVSMSEARSALVEEGGIPVLVELVEDGTQRQKEIAAVILLQICEDSVLYRTMVAR 306

Query: 464  EGAIPPLVALSQSGTSRAKQKAETLVELLRRPRSGITARTGSDVS 330
            EGAIPPLVALSQSGT+RAKQKAE L+ELLR+PRSG  A T SDVS
Sbjct: 307  EGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGNYAATTSDVS 351


>ref|NP_566136.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|6692260|gb|AAF24610.1|AC010870_3 unknown
            protein [Arabidopsis thaliana]
            gi|332640140|gb|AEE73661.1| armadillo/beta-catenin-like
            repeat-containing protein [Arabidopsis thaliana]
          Length = 355

 Score =  500 bits (1288), Expect = e-139
 Identities = 263/343 (76%), Positives = 302/343 (88%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1388 EMEADIQTNFSYMGRNFDDSLSINDSSTAFSDCDSDRSGEFSTASSQSRRLLTACASGNS 1209
            EME     +F+YMGR F D LS+ND S+AFSDC+SDRSGEF TASS+SRRLL +CAS NS
Sbjct: 2    EMENHRPGSFTYMGRKFSD-LSLNDDSSAFSDCNSDRSGEFPTASSESRRLLLSCASENS 60

Query: 1208 DDLIDQLVAGLDSG-SIEDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXX 1032
            DDLI+ LV+ LDS  SI++QK AAME+RLL+KNKPENRIKIA+AGAI+P           
Sbjct: 61   DDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQ 120

Query: 1031 XQEYGVTAILNLSLCDENKEAIASAGAIKPLVKALRIGNPTAKENAACALLRLSQIEDNK 852
             QEYGVTAILNLSLCDENKE+IAS+GAIKPLV+AL++G PTAKENAACALLRLSQIE+NK
Sbjct: 121  LQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENK 180

Query: 851  VAIGRSGAIPLLVNLLETGNLRGKKDASTALYSLCSVRENKIRAIECGIMKPLVELMADF 672
            VAIGRSGAIPLLVNLLETG  R KKDASTALYSLCS +ENKIRA++ GIMKPLVELMADF
Sbjct: 181  VAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADF 240

Query: 671  GSNMVDKSGFVLSLLVSLPEARAAVVEEGGIPVLVEIVEVGSHRQKEIAAAILLRLCEDS 492
            GSNMVDKS FV+SLL+S+PE++ A+VEEGG+PVLVEIVEVG+ RQKE+A +ILL+LCE+S
Sbjct: 241  GSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEES 300

Query: 491  SVYRTMVAREGAIPPLVALSQSGTSRAKQKAETLVELLRRPRS 363
             VYRTMVAREGAIPPLVALSQ+GTSRAKQKAE L+ELLR+PRS
Sbjct: 301  VVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRS 343


>gb|AAM64910.1| unknown [Arabidopsis thaliana]
          Length = 355

 Score =  499 bits (1285), Expect = e-139
 Identities = 262/343 (76%), Positives = 302/343 (88%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1388 EMEADIQTNFSYMGRNFDDSLSINDSSTAFSDCDSDRSGEFSTASSQSRRLLTACASGNS 1209
            EME     +F+YMGR F D LS+ND S+AFSDC+SDRSGEF TASS+SRRLL +CAS NS
Sbjct: 2    EMENHRPGSFTYMGRKFSD-LSLNDDSSAFSDCNSDRSGEFPTASSESRRLLLSCASENS 60

Query: 1208 DDLIDQLVAGLDSG-SIEDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXX 1032
            DDLI+ LV+ LDS  SI++QK AAME+RLL+KNKPENRIKIA+AGAI+P           
Sbjct: 61   DDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQ 120

Query: 1031 XQEYGVTAILNLSLCDENKEAIASAGAIKPLVKALRIGNPTAKENAACALLRLSQIEDNK 852
             QEYGVTAILNLSLCDENKE+IAS+GAIKPLV+AL++G PTAK+NAACALLRLSQIE+NK
Sbjct: 121  LQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKDNAACALLRLSQIEENK 180

Query: 851  VAIGRSGAIPLLVNLLETGNLRGKKDASTALYSLCSVRENKIRAIECGIMKPLVELMADF 672
            VAIGRSGAIPLLVNLLETG  R KKDASTALYSLCS +ENKIRA++ GIMKPLVELMADF
Sbjct: 181  VAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADF 240

Query: 671  GSNMVDKSGFVLSLLVSLPEARAAVVEEGGIPVLVEIVEVGSHRQKEIAAAILLRLCEDS 492
            GSNMVDKS FV+SLL+S+PE++ A+VEEGG+PVLVEIVEVG+ RQKE+A +ILL+LCE+S
Sbjct: 241  GSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEES 300

Query: 491  SVYRTMVAREGAIPPLVALSQSGTSRAKQKAETLVELLRRPRS 363
             VYRTMVAREGAIPPLVALSQ+GTSRAKQKAE L+ELLR+PRS
Sbjct: 301  VVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRS 343


>gb|AAL16172.1|AF428404_1 AT3g01400/T13O15_4 [Arabidopsis thaliana] gi|21928049|gb|AAM78053.1|
            AT3g01400/T13O15_4 [Arabidopsis thaliana]
          Length = 355

 Score =  496 bits (1278), Expect = e-138
 Identities = 262/343 (76%), Positives = 301/343 (87%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1388 EMEADIQTNFSYMGRNFDDSLSINDSSTAFSDCDSDRSGEFSTASSQSRRLLTACASGNS 1209
            EME     +F+YMGR F D LS+ND S+AFSDC+SDRSGEF TASS+SRRLL +CAS NS
Sbjct: 2    EMENHRPGSFTYMGRKFSD-LSLNDDSSAFSDCNSDRSGEFPTASSESRRLLLSCASENS 60

Query: 1208 DDLIDQLVAGLDSG-SIEDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXX 1032
            DDLI+ LV+ LDS  SI++QK AAME+RLL+KNKPENRIKIA+AGAI+P           
Sbjct: 61   DDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQ 120

Query: 1031 XQEYGVTAILNLSLCDENKEAIASAGAIKPLVKALRIGNPTAKENAACALLRLSQIEDNK 852
             QEYGVTAILNLSLCDENKE+IAS+GAIKPLV+AL++G PTAKENAACALLRLSQIE+NK
Sbjct: 121  LQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENK 180

Query: 851  VAIGRSGAIPLLVNLLETGNLRGKKDASTALYSLCSVRENKIRAIECGIMKPLVELMADF 672
            VAIGRSGAIPLLVNLLETG  R KKDASTALYSLCS +ENKIRA++ GIMKPLVELMADF
Sbjct: 181  VAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADF 240

Query: 671  GSNMVDKSGFVLSLLVSLPEARAAVVEEGGIPVLVEIVEVGSHRQKEIAAAILLRLCEDS 492
            GSNMVDKS FV+SLL+S+PE++ A+VEEGG+PVLVEIVEVG+ RQKE+A +ILL+LCE+S
Sbjct: 241  GSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEES 300

Query: 491  SVYRTMVAREGAIPPLVALSQSGTSRAKQKAETLVELLRRPRS 363
             VYRTMVAREGAIPPLVALSQ+GTSRAKQKAE L+ELLR+ RS
Sbjct: 301  VVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQLRS 343


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 352

 Score =  494 bits (1271), Expect = e-137
 Identities = 258/352 (73%), Positives = 301/352 (85%)
 Frame = -1

Query: 1385 MEADIQTNFSYMGRNFDDSLSINDSSTAFSDCDSDRSGEFSTASSQSRRLLTACASGNSD 1206
            ME + + +F+YMGR+F ++ S+ND S+AFSDC+SDRSGEF TASS+SRRLL ACA+ NSD
Sbjct: 1    MEMETRASFTYMGRSFGNT-SVNDDSSAFSDCNSDRSGEFPTASSESRRLLIACAAENSD 59

Query: 1205 DLIDQLVAGLDSGSIEDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQ 1026
            D I QLV  L+S SI++QK AAME+RLLAKNKPENR+KI +AGA++P            Q
Sbjct: 60   DFIRQLVLDLESCSIDEQKQAAMEIRLLAKNKPENRLKIVKAGALKPLISLISCSDSQLQ 119

Query: 1025 EYGVTAILNLSLCDENKEAIASAGAIKPLVKALRIGNPTAKENAACALLRLSQIEDNKVA 846
            EYGVTAILNLSLCDENKE IAS+GAIKPLV+AL+ G  TAKENAACALLRLSQ+E+NKVA
Sbjct: 120  EYGVTAILNLSLCDENKEVIASSGAIKPLVRALKTGTSTAKENAACALLRLSQVEENKVA 179

Query: 845  IGRSGAIPLLVNLLETGNLRGKKDASTALYSLCSVRENKIRAIECGIMKPLVELMADFGS 666
            IGRSG+IPLLVNLLETG  RGKKDA+TALYSLCSV+ENK+RA++ GIMKPLVELMADF S
Sbjct: 180  IGRSGSIPLLVNLLETGGFRGKKDAATALYSLCSVKENKMRAVQAGIMKPLVELMADFES 239

Query: 665  NMVDKSGFVLSLLVSLPEARAAVVEEGGIPVLVEIVEVGSHRQKEIAAAILLRLCEDSSV 486
            NMVDKS FVLSLLVS+ EAR A+VEEGGIPVLVEI+EVGS RQKEIA AILL++CED+ +
Sbjct: 240  NMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIEVGSQRQKEIAVAILLQICEDNLM 299

Query: 485  YRTMVAREGAIPPLVALSQSGTSRAKQKAETLVELLRRPRSGITARTGSDVS 330
             R MV REGAIPPL+ALSQSGT+RAKQKAETL++LLR+PRSG  A    DVS
Sbjct: 300  RRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRSGNAAARTPDVS 351


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