BLASTX nr result

ID: Bupleurum21_contig00021807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021807
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   120   5e-25
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   115   2e-23
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]   114   6e-23
gb|ABA94541.2| retrotransposon protein, putative, unclassified [...   113   8e-23
emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]   110   7e-22

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  120 bits (302), Expect = 5e-25
 Identities = 63/154 (40%), Positives = 87/154 (56%)
 Frame = +2

Query: 674  KLEFPKFDGTDPKGWVMRAEQYLEFINIDETKRTKLAGLHFEGRATIWFRFYQASRGNVP 853
            +L+FPKF+G DP GWV RA+Q+  +   +   R  LA  H EG+A +WF+  +A+ G   
Sbjct: 90   RLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISS 149

Query: 854  WRLFVTDLVARFENHENRDVQDMFNKLRQTGTVADYEDQFEELRALVVSKNKGFTEEYFV 1033
            W  FV  L  RF +    D  +   +L+QT TV DY+ QFE L     ++ +G  E Y +
Sbjct: 150  WEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALS----NQLRGLAESYKL 205

Query: 1034 SSFLSGLNDNIKGAVRMFRPQTLSDVIFLAKQEE 1135
            S FLSGL +NI+  VRM  P  L     LAK +E
Sbjct: 206  SCFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQE 239


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  115 bits (289), Expect = 2e-23
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
 Frame = +2

Query: 593  NSHPNHTTLVTPTQNNRSDFSNFNPIP--KLEFPKFDGTDPKGWVMRAEQYLEFINIDET 766
            +SHP HT         RS+  N +P    KL FPKF+G DP GW+ +AEQY +F+NI   
Sbjct: 64   SSHP-HTA--------RSNTINDHPHQHLKLSFPKFNGDDPTGWIYKAEQYFDFMNITPG 114

Query: 767  KRTKLAGLHFEGRATIWFRFYQASRGNVPWRLFVTDLVARFENHENRDVQDMFNKLRQTG 946
            ++ +LA  H EG A  W R+    RG + W  F   +  RF   +  D  +   +L+QT 
Sbjct: 115  QQVQLASFHLEGIALQWHRWLTKFRGPLTWDEFTKAVQLRFGPTDYEDPSEALTRLKQTT 174

Query: 947  TVADYEDQFEELRALVVSKNKGFTEEYFVSSFLSGLNDNIKGAVRMFRPQTLSDVIFLAK 1126
            TVA Y++ FE+L   V     G  E + +  F++GL D I+  V++ +P+TL+D I +A+
Sbjct: 175  TVAAYQEAFEKLSHRV----DGLPENFLIGCFIAGLQDEIRIDVKIKQPRTLADTIGVAR 230

Query: 1127 QEELR 1141
              E R
Sbjct: 231  LIEER 235


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score =  114 bits (284), Expect = 6e-23
 Identities = 60/154 (38%), Positives = 86/154 (55%)
 Frame = +2

Query: 674  KLEFPKFDGTDPKGWVMRAEQYLEFINIDETKRTKLAGLHFEGRATIWFRFYQASRGNVP 853
            +L+FPKF+G DP GWV RA+Q+  +   +   R  LA  H EG+A +WF+  +A+ G   
Sbjct: 55   RLDFPKFNGEDPSGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISS 114

Query: 854  WRLFVTDLVARFENHENRDVQDMFNKLRQTGTVADYEDQFEELRALVVSKNKGFTEEYFV 1033
            W  FV  L  RF +    +  +   +L+QT TV DY+ QFE L     ++ +G  E Y +
Sbjct: 115  WEGFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALS----NQLRGLAESYKL 170

Query: 1034 SSFLSGLNDNIKGAVRMFRPQTLSDVIFLAKQEE 1135
            S FLSGL ++I+  V M  P  L     LAK +E
Sbjct: 171  SCFLSGLREDIRFMVCMLNPSNLHIAFGLAKMQE 204


>gb|ABA94541.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1347

 Score =  113 bits (283), Expect = 8e-23
 Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
 Frame = +2

Query: 644  SDFSNFNP-IPKLEFPKFDGTDPKGWVMRAEQYLEFINIDETKRTKLAGLHFEGRATIWF 820
            S F    P +PK EFPKFDG +PK W  ++E+Y +   +        A LHF G A +W 
Sbjct: 122  SQFGTQGPRLPKTEFPKFDGDNPKLWKKKSEKYFDMYQVPYATWASFATLHFVGNAALWL 181

Query: 821  RFYQASRGNVPWRLFVTDLVARFENHENRDVQDMFNKLRQTGTVADYEDQFEELRALVVS 1000
            + Y+       W      +  +F     +   +  + L+Q GT+ +Y  +FEEL   V+ 
Sbjct: 182  QTYEELHAVESWSELCVAVNGKFGRDRYQQFLEKLDNLKQEGTIEEYYSRFEELMHKVLV 241

Query: 1001 KNKGFTEEYFVSSFLSGLNDNIKGAVRMFRPQTLSDVIFLAK-QEEL 1138
             N+G+ E +FV+ FL GL   IK A+++ RP T+   + LAK QEEL
Sbjct: 242  YNRGYDETFFVTKFLGGLKTEIKAAIKLHRPGTVDAALSLAKTQEEL 288


>emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
          Length = 1575

 Score =  110 bits (275), Expect = 7e-22
 Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
 Frame = +2

Query: 674  KLEFPKFDGTDPKGWVMRAEQYLEFINIDETKRTKLAGLHFEGRATIWF----RFYQASR 841
            KLEFP+F   DP  W  R  Q+ EF N  E ++  LA  H EG A  W+    R +Q   
Sbjct: 411  KLEFPQFSRDDPTEWFNRVNQFFEFQNTPEAQKVSLASYHLEGEANQWWQWICRTFQEEG 470

Query: 842  GNVPWRLFVTDLVARFENHENRDVQDMFNKLRQTGTVADYEDQFEELRALVVSKNKGFTE 1021
              + W  F  +L ARF   E  D  +  +++RQ G++ DY+ +FE L     ++ +G+T+
Sbjct: 471  RVLSWMNFEDELWARFGPSECEDFDEALSRIRQVGSLRDYQREFERLG----NRVQGWTQ 526

Query: 1022 EYFVSSFLSGLNDNIKGAVRMFRPQTLSDVIFLAKQEE 1135
               V +F+ GL  NI   +RMF+PQTL + I LA+ ++
Sbjct: 527  RALVGTFMGGLRPNISDGIRMFKPQTLKESINLARMKD 564


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