BLASTX nr result

ID: Bupleurum21_contig00021774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021774
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775...    56   9e-15
ref|XP_002531582.1| serine/arginine rich splicing factor, putati...    53   9e-15
gb|ACU22994.1| unknown [Glycine max]                                   56   9e-15
ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [S...    54   1e-14
gb|AFK42741.1| unknown [Lotus japonicus]                               53   2e-14

>ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
           max] gi|356553017|ref|XP_003544855.1| PREDICTED:
           uncharacterized protein LOC100775883 isoform 2 [Glycine
           max]
          Length = 249

 Score = 55.8 bits (133), Expect(2) = 9e-15
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -1

Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104
           Y  EPRGFGFVQYV PADA +AKYHMDGQ +
Sbjct: 77  YTGEPRGFGFVQYVDPADAADAKYHMDGQVL 107



 Score = 48.9 bits (115), Expect(2) = 9e-15
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -2

Query: 102 LLGRELTVVFAEENRKKPQEMRARQR 25
           LLGRELTVVFAEENRKKP EMR R+R
Sbjct: 107 LLGRELTVVFAEENRKKPTEMRTRER 132


>ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528778|gb|EEF30785.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 216

 Score = 52.8 bits (125), Expect(2) = 9e-15
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104
           Y  EPRGFGFVQYV PADA +AK+HMDG+ +
Sbjct: 76  YTGEPRGFGFVQYVDPADAADAKHHMDGEIL 106



 Score = 52.0 bits (123), Expect(2) = 9e-15
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 102 LLGRELTVVFAEENRKKPQEMRARQRV 22
           LLGRELTVVFAEENRKKP EMRAR+RV
Sbjct: 106 LLGRELTVVFAEENRKKPAEMRARERV 132


>gb|ACU22994.1| unknown [Glycine max]
          Length = 214

 Score = 55.8 bits (133), Expect(2) = 9e-15
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -1

Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104
           Y  EPRGFGFVQYV PADA +AKYHMDGQ +
Sbjct: 77  YTGEPRGFGFVQYVDPADAADAKYHMDGQVL 107



 Score = 48.9 bits (115), Expect(2) = 9e-15
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -2

Query: 102 LLGRELTVVFAEENRKKPQEMRARQR 25
           LLGRELTVVFAEENRKKP EMR R+R
Sbjct: 107 LLGRELTVVFAEENRKKPTEMRTRER 132


>ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
           gi|241919067|gb|EER92211.1| hypothetical protein
           SORBIDRAFT_01g034200 [Sorghum bicolor]
           gi|448878340|gb|AGE46133.1| arginine/serine-rich
           splicing factor SCL25A transcript I [Sorghum bicolor]
           gi|448878342|gb|AGE46134.1| arginine/serine-rich
           splicing factor SCL25A transcript II [Sorghum bicolor]
          Length = 213

 Score = 53.5 bits (127), Expect(2) = 1e-14
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -1

Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104
           Y REP+GFGF+QY  P DA +AKYHMDGQ +
Sbjct: 73  YTREPKGFGFIQYFDPEDASDAKYHMDGQML 103



 Score = 50.8 bits (120), Expect(2) = 1e-14
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -2

Query: 102 LLGRELTVVFAEENRKKPQEMRARQRVS 19
           LLGRE+TVVFAEENRKKP +MRAR+R+S
Sbjct: 103 LLGREITVVFAEENRKKPSDMRARERMS 130


>gb|AFK42741.1| unknown [Lotus japonicus]
          Length = 221

 Score = 52.8 bits (125), Expect(2) = 2e-14
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104
           Y   PRGFGFVQYV PADA +AKYH+DGQ +
Sbjct: 75  YTGNPRGFGFVQYVDPADAADAKYHLDGQIL 105



 Score = 50.8 bits (120), Expect(2) = 2e-14
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 102 LLGRELTVVFAEENRKKPQEMRARQRVS 19
           LLGRELTVVFAEENRKKP EMRAR+R S
Sbjct: 105 LLGRELTVVFAEENRKKPAEMRARERHS 132


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