BLASTX nr result
ID: Bupleurum21_contig00021774
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00021774 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775... 56 9e-15 ref|XP_002531582.1| serine/arginine rich splicing factor, putati... 53 9e-15 gb|ACU22994.1| unknown [Glycine max] 56 9e-15 ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [S... 54 1e-14 gb|AFK42741.1| unknown [Lotus japonicus] 53 2e-14 >ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine max] gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine max] Length = 249 Score = 55.8 bits (133), Expect(2) = 9e-15 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = -1 Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104 Y EPRGFGFVQYV PADA +AKYHMDGQ + Sbjct: 77 YTGEPRGFGFVQYVDPADAADAKYHMDGQVL 107 Score = 48.9 bits (115), Expect(2) = 9e-15 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 102 LLGRELTVVFAEENRKKPQEMRARQR 25 LLGRELTVVFAEENRKKP EMR R+R Sbjct: 107 LLGRELTVVFAEENRKKPTEMRTRER 132 >ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis] gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis] Length = 216 Score = 52.8 bits (125), Expect(2) = 9e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -1 Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104 Y EPRGFGFVQYV PADA +AK+HMDG+ + Sbjct: 76 YTGEPRGFGFVQYVDPADAADAKHHMDGEIL 106 Score = 52.0 bits (123), Expect(2) = 9e-15 Identities = 25/27 (92%), Positives = 26/27 (96%) Frame = -2 Query: 102 LLGRELTVVFAEENRKKPQEMRARQRV 22 LLGRELTVVFAEENRKKP EMRAR+RV Sbjct: 106 LLGRELTVVFAEENRKKPAEMRARERV 132 >gb|ACU22994.1| unknown [Glycine max] Length = 214 Score = 55.8 bits (133), Expect(2) = 9e-15 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = -1 Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104 Y EPRGFGFVQYV PADA +AKYHMDGQ + Sbjct: 77 YTGEPRGFGFVQYVDPADAADAKYHMDGQVL 107 Score = 48.9 bits (115), Expect(2) = 9e-15 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 102 LLGRELTVVFAEENRKKPQEMRARQR 25 LLGRELTVVFAEENRKKP EMR R+R Sbjct: 107 LLGRELTVVFAEENRKKPTEMRTRER 132 >ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor] gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor] gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum bicolor] gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum bicolor] Length = 213 Score = 53.5 bits (127), Expect(2) = 1e-14 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = -1 Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104 Y REP+GFGF+QY P DA +AKYHMDGQ + Sbjct: 73 YTREPKGFGFIQYFDPEDASDAKYHMDGQML 103 Score = 50.8 bits (120), Expect(2) = 1e-14 Identities = 23/28 (82%), Positives = 27/28 (96%) Frame = -2 Query: 102 LLGRELTVVFAEENRKKPQEMRARQRVS 19 LLGRE+TVVFAEENRKKP +MRAR+R+S Sbjct: 103 LLGREITVVFAEENRKKPSDMRARERMS 130 >gb|AFK42741.1| unknown [Lotus japonicus] Length = 221 Score = 52.8 bits (125), Expect(2) = 2e-14 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = -1 Query: 196 YCREPRGFGFVQYVHPADAEEAKYHMDGQYI 104 Y PRGFGFVQYV PADA +AKYH+DGQ + Sbjct: 75 YTGNPRGFGFVQYVDPADAADAKYHLDGQIL 105 Score = 50.8 bits (120), Expect(2) = 2e-14 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = -2 Query: 102 LLGRELTVVFAEENRKKPQEMRARQRVS 19 LLGRELTVVFAEENRKKP EMRAR+R S Sbjct: 105 LLGRELTVVFAEENRKKPAEMRARERHS 132