BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021769
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE75940.1| B1159F04.3 [Oryza sativa Japonica Group] gi|3856...   128   4e-28
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...   128   6e-28
gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]     127   1e-27
gb|ABA97412.1| retrotransposon protein, putative, Ty3-gypsy subc...   126   2e-27
gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-...   126   2e-27

>emb|CAE75940.1| B1159F04.3 [Oryza sativa Japonica Group]
           gi|38567815|emb|CAE05804.2| OSJNBb0046K02.14 [Oryza
           sativa Japonica Group]
          Length = 891

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/133 (48%), Positives = 88/133 (66%)
 Frame = -2

Query: 401 KTKYEGNHLLDLEESFKRIREVGMRLNPAKCTFGVSSGRFLGFIVTQRGIEIDPKQIKAI 222
           K++   +H  DL+E+F  +R  GM+LNP KC FGV  GR LGF+V++RGIE +P++I AI
Sbjct: 172 KSRKAFDHAFDLQETFDNLRAAGMKLNPEKCAFGVRVGRLLGFLVSERGIEANPEKIDAI 231

Query: 221 SMMKAPSSPKEVQVLTCMIAALRRFISTSSARSLPFIQALKAFGASTKNNNIDAQFVWTT 42
             M+ PSS +EVQ L   IAAL RF+S ++ R LPF + L+  G          +F WTT
Sbjct: 232 QQMRPPSSVREVQKLEGRIAALSRFLSKAAERGLPFFKTLQGAG----------KFSWTT 281

Query: 41  ECQLNFEKLKQYL 3
           ECQ  F++LKQYL
Sbjct: 282 ECQAAFDELKQYL 294


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/133 (48%), Positives = 88/133 (66%)
 Frame = -2

Query: 401  KTKYEGNHLLDLEESFKRIREVGMRLNPAKCTFGVSSGRFLGFIVTQRGIEIDPKQIKAI 222
            K++   +H  DL+E+F  +R  G++LNP KC FGV +G+ LGF+V+ RGIE +P++I AI
Sbjct: 931  KSRKAFDHAFDLQETFDSLRAAGIKLNPEKCVFGVRAGKLLGFLVSDRGIEANPEKIDAI 990

Query: 221  SMMKAPSSPKEVQVLTCMIAALRRFISTSSARSLPFIQALKAFGASTKNNNIDAQFVWTT 42
              MK PSS  EVQ LT  IAAL RF+ST++ R LPF + L+  G          +F WT 
Sbjct: 991  QQMKPPSSVHEVQKLTGRIAALSRFLSTAAERGLPFFKTLRGAG----------KFNWTP 1040

Query: 41   ECQLNFEKLKQYL 3
            ECQ  F++LKQYL
Sbjct: 1041 ECQAAFDELKQYL 1053


>gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 986

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/133 (48%), Positives = 88/133 (66%)
 Frame = -2

Query: 401 KTKYEGNHLLDLEESFKRIREVGMRLNPAKCTFGVSSGRFLGFIVTQRGIEIDPKQIKAI 222
           K++   +H  DL+E+F  +R  G++LNP KC FGV +G+ LGF+V++RGIE +P++I AI
Sbjct: 172 KSRKAFDHAFDLQETFDSLRAAGIKLNPVKCVFGVRAGKLLGFLVSERGIEANPEKIDAI 231

Query: 221 SMMKAPSSPKEVQVLTCMIAALRRFISTSSARSLPFIQALKAFGASTKNNNIDAQFVWTT 42
             MK PSS  EVQ LT  IAAL RF+S ++ R LPF + L+  G          +F WT 
Sbjct: 232 QQMKPPSSVHEVQKLTGRIAALSRFLSKAAERGLPFFKTLRGAG----------KFNWTP 281

Query: 41  ECQLNFEKLKQYL 3
           ECQ  F++LKQYL
Sbjct: 282 ECQAAFDELKQYL 294


>gb|ABA97412.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1053

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/123 (50%), Positives = 82/123 (66%)
 Frame = -2

Query: 371  DLEESFKRIREVGMRLNPAKCTFGVSSGRFLGFIVTQRGIEIDPKQIKAISMMKAPSSPK 192
            DL+E+F  +   GM+LNP KC FGV +G+ LGF+V++RGIE +P++I AI  MK PSS +
Sbjct: 698  DLQETFDNLYAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVR 757

Query: 191  EVQVLTCMIAALRRFISTSSARSLPFIQALKAFGASTKNNNIDAQFVWTTECQLNFEKLK 12
            EVQ L C IAAL RF+S  + R LPF + L+  G          +F WT ECQ  F++LK
Sbjct: 758  EVQKLACRIAALSRFLSKGAERGLPFFKTLRGTG----------KFTWTPECQAAFDELK 807

Query: 11   QYL 3
            QYL
Sbjct: 808  QYL 810


>gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1587

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/133 (47%), Positives = 89/133 (66%)
 Frame = -2

Query: 401  KTKYEGNHLLDLEESFKRIREVGMRLNPAKCTFGVSSGRFLGFIVTQRGIEIDPKQIKAI 222
            K++   +H +DL+E+F  +R  G++LNP KC FGV  G+ LGF+V++RGIE++P++I AI
Sbjct: 976  KSRKAFDHAIDLQETFDSLRAAGIKLNPEKCVFGVCIGKLLGFLVSERGIEVNPEKINAI 1035

Query: 221  SMMKAPSSPKEVQVLTCMIAALRRFISTSSARSLPFIQALKAFGASTKNNNIDAQFVWTT 42
              MK PSS  EVQ L   IAAL RF+S ++ R+LPF + L+  G          +F WT 
Sbjct: 1036 QQMKPPSSVHEVQKLAGRIAALSRFLSKAAERALPFFKTLRGTG----------KFNWTP 1085

Query: 41   ECQLNFEKLKQYL 3
            ECQ  F++LKQYL
Sbjct: 1086 ECQAAFDELKQYL 1098