BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021740
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   489   e-136
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   488   e-135
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-130
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-130
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   458   e-126

>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  489 bits (1259), Expect = e-136
 Identities = 227/352 (64%), Positives = 288/352 (81%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
            IDMY+KSG I  A+ +FE N   D D+ATWNAMIAG TQNGL E+ F VFR+M+++ V P
Sbjct: 464  IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523

Query: 181  NAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
            NAVTLAS+LPACNP+G++ LGKQ+H +AIR  L++NVFV +AL+DMYSK G++ YAENVF
Sbjct: 524  NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVF 583

Query: 361  ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
            A + E+NSVTYT MI  YGQHG+G++AL+LF++M    I PD +T VA+LSACSY GLVD
Sbjct: 584  AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643

Query: 541  EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLS 720
            EGL+IF+SMEREY I+PS+EHYCC+ DMLG+VGRVVEAY FV  LGEEGN  GIWGSLL 
Sbjct: 644  EGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLG 703

Query: 721  ACRTHGEFQLGKIVAKRFYEIEKMNNMSGYHVLLSNMYAEEGNWEFVDRVREGMQEKGLT 900
            ACR HGEF+LGK+VA +  E+EK ++++GYHVLLSN+YA EGNW+ VDRVR+ M++KGL 
Sbjct: 704  ACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLM 763

Query: 901  KEVGCSWIDVAGYISYFVCRDQKHPQSDNIYVSLEELGVNMRDAGYRPCIEL 1056
            KE GCSW++VAG+++ F+ RD KHPQ   IY  LE+L + M+DAGY+PC+ L
Sbjct: 764  KEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNL 815



 Score =  107 bits (267), Expect = 7e-21
 Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLD-RTVS 177
            I MY++ G ++ A+ +F+  C  + +   WN MI G  QN    +A  +F Q+++     
Sbjct: 262  IFMYAELGCVDFAREIFD--CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFV 319

Query: 178  PNAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENV 357
             + VT  S L A + L  + LG+QLHAY +++     V + +A++ MYS+ GS+  +  V
Sbjct: 320  LDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379

Query: 358  FANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLV 537
            F+N  ER+ VT+  M+  + Q+GL  + L L ++M++     D +T+ A+LS  S     
Sbjct: 380  FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQ 439

Query: 538  DEGLQIFESMEREYGIR-PSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSL 714
            + G Q    + R +GI+    + Y  + DM  K G +  A     K  +       W ++
Sbjct: 440  EIGKQAHAYLIR-HGIQFEGMDSY--LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAM 496

Query: 715  LSACRTHGEFQLGKIVAKRFYE 780
            ++    +G  + G  V ++  E
Sbjct: 497  IAGYTQNGLSEEGFAVFRKMIE 518



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
 Frame = +1

Query: 31   EAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSPNAVTLASVLP 210
            +  + VF+T   R  +   WN MI+   +   + +AF +FR M+   + P  V+  +V P
Sbjct: 169  DLVRRVFDT--MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226

Query: 211  ACNPLGSMALGKQLHAYAIR--NCLSQNVFVDSALVDMYSKLGSVHYAENVFANSPERNS 384
            A   +        L+   ++  +    + FV S+ + MY++LG V +A  +F    ERN+
Sbjct: 227  AVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286

Query: 385  VTYTNMILGYGQHGLGQKALTLFYSMREC-NISPDPITMVAVLSACSYTGLVDEGLQIFE 561
              +  MI GY Q+    +A+ LF  + E      D +T ++ L+A S    ++ G Q+  
Sbjct: 287  EVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQL-- 344

Query: 562  SMEREYGIRPSSEHYCCITD----MLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLSACR 729
                 Y ++ S+     I +    M  + G +  ++     + E   V   W +++SA  
Sbjct: 345  ---HAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVV--TWNTMVSAFV 399

Query: 730  THGEFQLGKIVA----KRFYEIEKMNNMSGYHVLLSNMYAEE-GNWEFVDRVREGMQEKG 894
             +G    G ++     K+ + ++ +  ++    L SN+ ++E G       +R G+Q +G
Sbjct: 400  QNGLDDEGLMLVFAMQKQGFMVDSV-TLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG 458

Query: 895  L 897
            +
Sbjct: 459  M 459



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
 Frame = +1

Query: 88  WNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP--NAVTLASVLPACNPLGSMALGKQLHAY 261
           WN +I G   N +   A + + +M   + SP  ++ T +S L AC    S+ LGK LH +
Sbjct: 71  WNTIIIGFICNNMPIDALLFYARMR-ASPSPKFDSYTFSSTLKACAQARSLKLGKALHCH 129

Query: 262 AIRNCLSQNVFVDSALVDMYSK-------LGSVHYAEN------VFANSPERNSVTYTNM 402
            +R+    +  V ++L++MYS        LG+ +   N      VF    +RN V +  M
Sbjct: 130 VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTM 189

Query: 403 ILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSA 516
           I  Y +     +A  +F +M    I P P++ V V  A
Sbjct: 190 ISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  488 bits (1257), Expect = e-135
 Identities = 228/352 (64%), Positives = 286/352 (81%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
            IDMY+KSG I  A+ +FE N   D D+ATWNAMIAG TQNGL E+ F VFR+M+++ V P
Sbjct: 464  IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523

Query: 181  NAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
            NAVTLAS+LPACNP+G++ LGKQ+H +AIR  L+QNVFV +AL+DMYSK G++ YAENVF
Sbjct: 524  NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVF 583

Query: 361  ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
            A + E+NSVTYT MIL YGQHG+G++AL+LF++M    I PD +T VA+LSACSY GLVD
Sbjct: 584  AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643

Query: 541  EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLS 720
            EGL+IF+SMEREY I+PSSEHYCC+ DMLG+VGRV EAY FV  LGEEGN   IWGSLL 
Sbjct: 644  EGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLG 703

Query: 721  ACRTHGEFQLGKIVAKRFYEIEKMNNMSGYHVLLSNMYAEEGNWEFVDRVREGMQEKGLT 900
            ACR HGEF+LGK+VA +  E+EK + ++GYHVLLSN+YA EGNW+ VDRVR+ M++KGL 
Sbjct: 704  ACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLM 763

Query: 901  KEVGCSWIDVAGYISYFVCRDQKHPQSDNIYVSLEELGVNMRDAGYRPCIEL 1056
            KE GCSW++VAG+++ F+ RD KHPQ   IY  LE+L + M+DAGY+PC+ L
Sbjct: 764  KEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNL 815



 Score =  105 bits (262), Expect = 3e-20
 Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLD-RTVS 177
            I MY++ G ++ A+ +F+  C  + +   WN MI G  QN    +A  +F Q+++     
Sbjct: 262  IFMYAELGCVDFAREIFD--CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFX 319

Query: 178  PNAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENV 357
             + VT  S L A + L  + LG+QLHAY +++     V + +A++ MYS+ GS+  +  V
Sbjct: 320  LDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379

Query: 358  FANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLV 537
            F+N  ER+ VT+  M+  + Q+GL  + L L + M++     D +T+ A+LS  S     
Sbjct: 380  FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQ 439

Query: 538  DEGLQIFESMEREYGIR-PSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSL 714
            + G Q    + R +GI+    + Y  + DM  K G +  A     K          W ++
Sbjct: 440  EIGKQAHAYLIR-HGIQFEGMDGY--LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAM 496

Query: 715  LSACRTHGEFQLGKIVAKRFYE 780
            ++    +G  + G  V ++  E
Sbjct: 497  IAGYTQNGLSEEGFAVFRKMIE 518



 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
 Frame = +1

Query: 31   EAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSPNAVTLASVLP 210
            +  + VF+T   R  +   WN MI+   +   + +AF +FR M+   + P  V+  +V P
Sbjct: 169  DLVRRVFDT--MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226

Query: 211  ACNPLGSMALGKQLHAYAIR--NCLSQNVFVDSALVDMYSKLGSVHYAENVFANSPERNS 384
            A   +        L+   ++  +    + FV S+ + MY++LG V +A  +F    ERN+
Sbjct: 227  AVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286

Query: 385  VTYTNMILGYGQHGLGQKALTLFYSMREC-NISPDPITMVAVLSACSYTGLVDEGLQIFE 561
              +  MI GY Q+    +A+ LF  + E      D +T ++ L+A S    +D G Q+  
Sbjct: 287  EVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQL-- 344

Query: 562  SMEREYGIRPSSEHYCCITD----MLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLSACR 729
                 Y ++ S+     I +    M  + G +  ++     + E   V   W +++SA  
Sbjct: 345  ---HAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVV--TWNTMVSAFV 399

Query: 730  THGEFQLGKIVAKRFYEIEKMN------NMSGYHVLLSNMYAEE-GNWEFVDRVREGMQE 888
             +G    G ++    +E++K         ++    L SN+ ++E G       +R G+Q 
Sbjct: 400  QNGLDDEGLMLV---FEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQF 456

Query: 889  KGL 897
            +G+
Sbjct: 457  EGM 459



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
 Frame = +1

Query: 88  WNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP--NAVTLASVLPACNPLGSMALGKQLHAY 261
           WN +I G   N +   A + + +M   + SP  ++ T +S L AC    S+ LGK LH +
Sbjct: 71  WNTIIIGFICNNMPIDALLFYARMR-ASPSPKFDSYTFSSTLKACAQARSLKLGKALHCH 129

Query: 262 AIRNCLSQNVFVDSALVDMYSK-------LGSVHYAEN------VFANSPERNSVTYTNM 402
            +R+    +  V ++L++MYS        LG+ +   N      VF    +RN V +  M
Sbjct: 130 VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTM 189

Query: 403 ILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSA 516
           I  Y +     +A  +F +M    I P P++ V V  A
Sbjct: 190 ISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  469 bits (1206), Expect = e-130
 Identities = 220/348 (63%), Positives = 284/348 (81%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
            IDMY+KSG IEAA+ VFE + + + DQATWN+M++G TQNGL++QAF++ RQMLD+ V P
Sbjct: 456  IDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMP 515

Query: 181  NAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
            N VTLAS+LPACNP G +  GKQLH ++IRN L QNVFV +AL+DMYSK GS+ +AENVF
Sbjct: 516  NVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVF 575

Query: 361  ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
            + + E++ VTY+ MILGYGQHG+G+ AL +F+ M++  I PD +T+VAVLSACSY GLVD
Sbjct: 576  SKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVD 635

Query: 541  EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLS 720
            EGLQIFESM   Y I+PS+EH+CC+ DMLG+ GRV +AY FV+ LGE+GNV+ IWGSLL+
Sbjct: 636  EGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLA 695

Query: 721  ACRTHGEFQLGKIVAKRFYEIEKMNNMSGYHVLLSNMYAEEGNWEFVDRVREGMQEKGLT 900
            ACR H +F+LGK+VAK+  E+EK+N  +GYHVLLSN+YAEE NWE VD VR+ M+E+GL 
Sbjct: 696  ACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLK 755

Query: 901  KEVGCSWIDVAGYISYFVCRDQKHPQSDNIYVSLEELGVNMRDAGYRP 1044
            KE G SWI++AGY+++F  +D+KHPQSD IY  LEEL + M+ AGYRP
Sbjct: 756  KETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 803



 Score =  118 bits (296), Expect = 3e-24
 Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLD-RTVS 177
            I MY++ G +E AK VF+    R+++   WN MI+   QN    +   +F Q ++    +
Sbjct: 254  IFMYAELGCLEFAKKVFDNCLERNTE--VWNTMISAFVQNNFSLEGIQLFFQAVESEDAA 311

Query: 178  PNAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENV 357
             + VTL S + A + L    L +QLHA+ I+N     V V +AL+ MYS+  S+  +  +
Sbjct: 312  IDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKI 371

Query: 358  FANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLV 537
            F N PE++ V++  MI  + Q+GL  +AL LFY M++ ++  D +T+ A+LSA S     
Sbjct: 372  FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNP 431

Query: 538  DEGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLL 717
            D G Q    + R        + Y  + DM  K G +  A N   K          W S++
Sbjct: 432  DIGKQTHGYLLRNGIQFEGMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 489

Query: 718  SACRTHGEFQLGKIVAKRFYEIEKMNNM 801
            S    +G      ++ ++  + + M N+
Sbjct: 490  SGYTQNGLVDQAFLILRQMLDQKVMPNV 517



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
 Frame = +1

Query: 7   MYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSPNA 186
           M S     +  + VF+T   R      WN +IA   +     +A   F  M+   + P+ 
Sbjct: 153 MVSGYSRCDLVRKVFDT--MRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSP 210

Query: 187 VTLASVLPACNPLGSMALGKQLHAYAIR--NCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
           V+  +V PA + LG       +H   ++  +    +++V S+ + MY++LG + +A+ VF
Sbjct: 211 VSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVF 270

Query: 361 ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMREC-NISPDPITMVAVLSACSYTGLV 537
            N  ERN+  +  MI  + Q+    + + LF+   E  + + D +T+++ +SA S+    
Sbjct: 271 DNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASH---- 326

Query: 538 DEGLQIFESMER--EYGIRPSSEHYCCITD----MLGKVGRVVEAYNFVMKLGEEGNVLG 699
              LQ FE  E+   + I+  +    C+ +    M  +   +  ++     + E+  V  
Sbjct: 327 ---LQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVV-- 381

Query: 700 IWGSLLSACRTHGEFQLGKIVAKRFYEIEKMNNM 801
            W +++SA   +G   L       FYE++K + M
Sbjct: 382 SWNTMISAFVQNG---LNDEALMLFYEMKKQDLM 412



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
 Frame = +1

Query: 16  KSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRT--VSPNAV 189
           + G +  A+ +F+    R S    WN +I G   N   ++A + +  M   +  V  ++ 
Sbjct: 40  QEGQLHLARQLFDA-LPRPST-VLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSY 97

Query: 190 TLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSV---------- 339
           T +SVL AC    ++ +GK +HA+ +R  ++ +  V ++L++MYS   S           
Sbjct: 98  TYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGY 157

Query: 340 ---HYAENVFANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVL 510
                   VF    +R  V +  +I  Y +     +A+  F  M +  I P P++ V V 
Sbjct: 158 SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVF 217

Query: 511 SACSYTG 531
            A S  G
Sbjct: 218 PAFSSLG 224


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  469 bits (1206), Expect = e-130
 Identities = 220/348 (63%), Positives = 284/348 (81%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
            IDMY+KSG IEAA+ VFE + + + DQATWN+M++G TQNGL++QAF++ RQMLD+ V P
Sbjct: 432  IDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMP 491

Query: 181  NAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
            N VTLAS+LPACNP G +  GKQLH ++IRN L QNVFV +AL+DMYSK GS+ +AENVF
Sbjct: 492  NVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVF 551

Query: 361  ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
            + + E++ VTY+ MILGYGQHG+G+ AL +F+ M++  I PD +T+VAVLSACSY GLVD
Sbjct: 552  SKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVD 611

Query: 541  EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLS 720
            EGLQIFESM   Y I+PS+EH+CC+ DMLG+ GRV +AY FV+ LGE+GNV+ IWGSLL+
Sbjct: 612  EGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLA 671

Query: 721  ACRTHGEFQLGKIVAKRFYEIEKMNNMSGYHVLLSNMYAEEGNWEFVDRVREGMQEKGLT 900
            ACR H +F+LGK+VAK+  E+EK+N  +GYHVLLSN+YAEE NWE VD VR+ M+E+GL 
Sbjct: 672  ACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLK 731

Query: 901  KEVGCSWIDVAGYISYFVCRDQKHPQSDNIYVSLEELGVNMRDAGYRP 1044
            KE G SWI++AGY+++F  +D+KHPQSD IY  LEEL + M+ AGYRP
Sbjct: 732  KETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 779



 Score =  118 bits (296), Expect = 3e-24
 Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLD-RTVS 177
            I MY++ G +E AK VF+    R+++   WN MI+   QN    +   +F Q ++    +
Sbjct: 230  IFMYAELGCLEFAKKVFDNCLERNTE--VWNTMISAFVQNNFSLEGIQLFFQAVESEDAA 287

Query: 178  PNAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENV 357
             + VTL S + A + L    L +QLHA+ I+N     V V +AL+ MYS+  S+  +  +
Sbjct: 288  IDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKI 347

Query: 358  FANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLV 537
            F N PE++ V++  MI  + Q+GL  +AL LFY M++ ++  D +T+ A+LSA S     
Sbjct: 348  FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNP 407

Query: 538  DEGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLL 717
            D G Q    + R        + Y  + DM  K G +  A N   K          W S++
Sbjct: 408  DIGKQTHGYLLRNGIQFEGMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 465

Query: 718  SACRTHGEFQLGKIVAKRFYEIEKMNNM 801
            S    +G      ++ ++  + + M N+
Sbjct: 466  SGYTQNGLVDQAFLILRQMLDQKVMPNV 493



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
 Frame = +1

Query: 7   MYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSPNA 186
           M S     +  + VF+T   R      WN +IA   +     +A   F  M+   + P+ 
Sbjct: 129 MVSGYSRCDLVRKVFDT--MRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSP 186

Query: 187 VTLASVLPACNPLGSMALGKQLHAYAIR--NCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
           V+  +V PA + LG       +H   ++  +    +++V S+ + MY++LG + +A+ VF
Sbjct: 187 VSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVF 246

Query: 361 ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMREC-NISPDPITMVAVLSACSYTGLV 537
            N  ERN+  +  MI  + Q+    + + LF+   E  + + D +T+++ +SA S+    
Sbjct: 247 DNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASH---- 302

Query: 538 DEGLQIFESMER--EYGIRPSSEHYCCITD----MLGKVGRVVEAYNFVMKLGEEGNVLG 699
              LQ FE  E+   + I+  +    C+ +    M  +   +  ++     + E+  V  
Sbjct: 303 ---LQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVV-- 357

Query: 700 IWGSLLSACRTHGEFQLGKIVAKRFYEIEKMNNM 801
            W +++SA   +G   L       FYE++K + M
Sbjct: 358 SWNTMISAFVQNG---LNDEALMLFYEMKKQDLM 388



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
 Frame = +1

Query: 16  KSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRT--VSPNAV 189
           + G +  A+ +F+    R S    WN +I G   N   ++A + +  M   +  V  ++ 
Sbjct: 16  QEGQLHLARQLFDA-LPRPST-VLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSY 73

Query: 190 TLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSV---------- 339
           T +SVL AC    ++ +GK +HA+ +R  ++ +  V ++L++MYS   S           
Sbjct: 74  TYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGY 133

Query: 340 ---HYAENVFANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVL 510
                   VF    +R  V +  +I  Y +     +A+  F  M +  I P P++ V V 
Sbjct: 134 SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVF 193

Query: 511 SACSYTG 531
            A S  G
Sbjct: 194 PAFSSLG 200


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519426|gb|AET01050.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  458 bits (1179), Expect = e-126
 Identities = 214/348 (61%), Positives = 275/348 (79%)
 Frame = +1

Query: 1    IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
            IDMY+KSGSI  A+ +FE NC+ D DQATWNA+IAG TQNGL E+A ++ +QML + V P
Sbjct: 467  IDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIP 526

Query: 181  NAVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVF 360
            NAVTLAS+LPAC+ +GSM L +QLH ++IR  L +NV+V ++L D YSK G++ YAENVF
Sbjct: 527  NAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVF 586

Query: 361  ANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
              +PE+NSVTYT M++ YGQHG+G++ALTL+ SM    I PD +T VA+LSAC+Y+GLVD
Sbjct: 587  LRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVD 646

Query: 541  EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNVLGIWGSLLS 720
            EGLQIFESME+ + I+PS EHYCC+ DMLG+VGRVVEAY FV  LGE+ N + IWGSLL 
Sbjct: 647  EGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLG 706

Query: 721  ACRTHGEFQLGKIVAKRFYEIEKMNNMSGYHVLLSNMYAEEGNWEFVDRVREGMQEKGLT 900
            +CR HG F+LGK VAK+   +     M+GYHVLLSN+YAEEG WE VDRVR+ M+EKGL 
Sbjct: 707  SCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLH 766

Query: 901  KEVGCSWIDVAGYISYFVCRDQKHPQSDNIYVSLEELGVNMRDAGYRP 1044
            KE GCSW+++AG+++ FV RD+KHPQS  IY  L+ L ++M+ AGY+P
Sbjct: 767  KETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKP 814



 Score =  119 bits (298), Expect = 2e-24
 Identities = 104/389 (26%), Positives = 179/389 (46%), Gaps = 45/389 (11%)
 Frame = +1

Query: 7    MYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSPNA 186
            MYS+   ++ +  VF+    RD+   +WN +I+   QNG  E+A M+  +M  +    ++
Sbjct: 369  MYSRCNHVDTSLKVFDKMLERDA--VSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDS 426

Query: 187  VTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVFAN 366
            VT  ++L A + L ++ +GKQ HAY IR  + Q   ++S L+DMY+K GS+  AE +F  
Sbjct: 427  VTATALLSAASNLRNLYVGKQTHAYLIRRGI-QFEGMESYLIDMYAKSGSIRTAELLFEQ 485

Query: 367  --SPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACSYTGLVD 540
              S +R+  T+  +I GY Q+GL +KA+ L   M   N+ P+ +T+ ++L ACS  G + 
Sbjct: 486  NCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMG 545

Query: 541  -----EGLQIFESMEREYGIRPSSEHYCCITDMLGKVGRVVEAYNFVMKLGEEGNV---- 693
                  G  I   +E+   +  S      +TD   K G +  A N  ++  E+ +V    
Sbjct: 546  LARQLHGFSIRRFLEKNVYVGTS------LTDTYSKCGAISYAENVFLRTPEKNSVTYTT 599

Query: 694  --------------LGIWGS---------------LLSACRTHGEFQLGKIVAKRFYEIE 786
                          L ++ S               +LSAC   G    G  + +   ++ 
Sbjct: 600  MMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVH 659

Query: 787  KMNNMSGYHVLLSNMYAEEGN----WEFVDRVREGMQEKGLTKEVGCSWIDVAGYISYFV 954
            K+     ++  +++M    G     +EFV    +G+ E   T E+   W  + G      
Sbjct: 660  KIKPSIEHYCCVADMLGRVGRVVEAYEFV----KGLGEDANTMEI---WGSLLG-----S 707

Query: 955  CRDQKHPQ-SDNIYVSLEELGVNMRDAGY 1038
            CR+  H +    +   L  +G++ R AGY
Sbjct: 708  CRNHGHFELGKAVAKKLLNMGMDKRMAGY 736



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
 Frame = +1

Query: 7   MYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP-N 183
           M+S  G ++ A+ VF+    ++++   WN MI    QN    +A  VF Q L+      +
Sbjct: 267 MFSDVGCMDYARMVFDRCLNKNTE--IWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCD 324

Query: 184 AVTLASVLPACNPLGSMALGKQLHAYAIRNCLSQNVFVDSALVDMYSKLGSVHYAENVFA 363
            VTL SVL A + L  + L +Q HA+ I++     + + +A++ MYS+   V  +  VF 
Sbjct: 325 DVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFD 384

Query: 364 NSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISPDPITMVAVLSACS-----YT 528
              ER++V++  +I  + Q+G  ++AL L   M++     D +T  A+LSA S     Y 
Sbjct: 385 KMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYV 444

Query: 529 G------LVDEGLQIFESME 570
           G      L+  G+Q FE ME
Sbjct: 445 GKQTHAYLIRRGIQ-FEGME 463



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
 Frame = +1

Query: 1   IDMYSKSGSIEAAKAVFETNCTRDSDQATWNAMIAGNTQNGLIEQAFMVFRQMLDRTVSP 180
           ++MY+ S   E A  VF+    R  +   WN +I    +     QA   F  M++++V P
Sbjct: 163 LNMYA-SCQHEYALNVFDV--MRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMP 219

Query: 181 NAVTLASVLPACNPLGSMALGKQLHAYAIR--NCLSQNVFVDSALVDMYSKLGSVHYAEN 354
           + VT  ++ PA + LG     K  + +  +  +    +VFV S+ + M+S +G + YA  
Sbjct: 220 SPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARM 279

Query: 355 VFANSPERNSVTYTNMILGYGQHGLGQKALTLFYSMRECNISP-DPITMVAVLSACS 522
           VF     +N+  +  MI+ Y Q+    +A+ +F    E      D +T+++VL+A S
Sbjct: 280 VFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVS 336