BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021733
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528356.1| pentatricopeptide repeat-containing protein,...   132   4e-29
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   117   8e-25
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24

>ref|XP_002528356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532224|gb|EEF34028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 356

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/134 (51%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
 Frame = +1

Query: 1   LTLYSKSELPHRSSALVL----RLFDQIPSPNVVSWTALISSFSTSHLSLHYFTAMLRHQ 168
           +TLYS+S      + LV     RLF  +PSPN+VSWT+LIS+ + S LSLH+F +MLR  
Sbjct: 33  ITLYSRSP-----NFLVFSYANRLFSLLPSPNIVSWTSLISAHTHSFLSLHHFLSMLRRP 87

Query: 169 ICPNQRTLASILSISANFSCFSFGFQVHCVGVKLGLCSQAFTASSLVNMYCKMKCVDSAR 348
           I PNQRTLAS+     N S  SFGF +H + +KL L +Q F+ S+LVN Y K +  ++AR
Sbjct: 88  ILPNQRTLASLFKACTNLSALSFGFSLHSMALKLSLDTQPFSGSALVNFYSKCRLPENAR 147

Query: 349 QVFDEIPERNGVCY 390
           +VFDE+PER+ VCY
Sbjct: 148 KVFDEMPERDEVCY 161


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/131 (48%), Positives = 88/131 (67%)
 Frame = +1

Query: 1   LTLYSKSELPHRSSALVLRLFDQIPSPNVVSWTALISSFSTSHLSLHYFTAMLRHQICPN 180
           +T YSK+ L H S+    RLF+QIP P++VSWTALIS+ S++ LSL +F +MLR+   PN
Sbjct: 51  ITRYSKANLLHYSA----RLFNQIPFPDIVSWTALISAHSSTFLSLRHFVSMLRYPTFPN 106

Query: 181 QRTLASILSISANFSCFSFGFQVHCVGVKLGLCSQAFTASSLVNMYCKMKCVDSARQVFD 360
           +RTLA +    A+  C SFGF +H +  KL LC+  ++ S+LVN Y K +  + A +VFD
Sbjct: 107 ERTLAPLFKTCASLPCVSFGFALHSLAYKLSLCNGPYSGSALVNFYSKCRLFNDACKVFD 166

Query: 361 EIPERNGVCYS 393
           EI  R+  CYS
Sbjct: 167 EISYRDEFCYS 177


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1   LTLYSKSELPHRSSALVLRLFDQ-IPSPNVVSWTALISSFSTSHLSLHYFTAMLRHQICP 177
           +TLYSKS L  ++    +R+F   IPSPNVVSWTALIS+++++  +L +F +MLRH   P
Sbjct: 54  ITLYSKSNLLSKA----VRIFHHHIPSPNVVSWTALISAYASTSFALLHFISMLRHPTLP 109

Query: 178 NQRTLASILSISANFSCFSFGFQVHCVGVKLGLCSQAFTASSLVNMYCKMKCVDSARQVF 357
           NQRTLAS+L   A+    SFG Q+H + +KL L +Q F +S+LVN Y K +    A +VF
Sbjct: 110 NQRTLASLLKTCASLPSLSFGLQLHSLSLKLSLSAQPFVSSALVNFYSKCRLPLEACRVF 169

Query: 358 DEIPERNGVCYS 393
           DEI ER+ VC++
Sbjct: 170 DEITERDEVCFA 181


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  117 bits (294), Expect = 8e-25
 Identities = 63/132 (47%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1   LTLYSKSELPHRSSALVLRLFDQIP-SPNVVSWTALISSFSTSHLSLHYFTAMLRHQICP 177
           +T YSKS L    S+  + LF ++P  PNVVSWTALIS+ S + LSL +F AMLRH   P
Sbjct: 41  ITHYSKSNL----SSYAVSLFHRLPFPPNVVSWTALISAHSNTLLSLRHFLAMLRHNTLP 96

Query: 178 NQRTLASILSISANFSCFSFGFQVHCVGVKLGLCSQAFTASSLVNMYCKMKCVDSARQVF 357
           N RTLAS+ +  A  +  SF   +H + +KL L    F ASSL+++Y K++   +AR+VF
Sbjct: 97  NHRTLASLFATCAALTAVSFALSLHSLALKLALAHHPFPASSLLSVYAKLRMPHNARKVF 156

Query: 358 DEIPERNGVCYS 393
           DEIP+ + VC+S
Sbjct: 157 DEIPQPDNVCFS 168


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1   LTLYSKSELPHRSSALVLRLFDQIP-SPNVVSWTALISSFSTSHLSLHYFTAMLRHQICP 177
           +T YSKS+L    S+  + LF ++P  PNVVSWTALIS+ S + LSL +F AMLRH   P
Sbjct: 41  ITHYSKSDL----SSYAVSLFQRLPFPPNVVSWTALISAHSNTLLSLRHFLAMLRHNTLP 96

Query: 178 NQRTLASILSISANFSCFSFGFQVHCVGVKLGLCSQAFTASSLVNMYCKMKCVDSARQVF 357
           N RT+AS+ +  A  +  SF   +H + +KL L    F ASSL+++Y K++   +AR+VF
Sbjct: 97  NHRTVASLFTTCAALTAVSFALSLHSLALKLSLSQHPFPASSLLSLYAKLRMPLNARKVF 156

Query: 358 DEIPERNGVCYS 393
           DEIP+ + VC+S
Sbjct: 157 DEIPQPDNVCFS 168