BLASTX nr result

ID: Bupleurum21_contig00021731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021731
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630658.1| F-box/LRR-repeat protein [Medicago truncatul...    64   2e-08
ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata sub...    59   4e-07
ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    58   7e-07
ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    58   7e-07
dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]                 58   7e-07

>ref|XP_003630658.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355524680|gb|AET05134.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 370

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = -2

Query: 250 DDLFLTAGPFCVDWLTKIGNGLKSISISALLVQSYPKPTNILDVISYNCYGLVELTLNNS 71
           DDL LT   F  DWL  + N + S S+S   VQS  + +  L +IS  CYGLV+L + N+
Sbjct: 57  DDLHLTDFNFIQDWLPSLSNSINSPSVSDFWVQSCWRRSRALPLISSTCYGLVQLVIRNA 116

Query: 70  ALCVIDMRQMPLLTRLTLKDV 8
            L V  +  MP LT LTL+ V
Sbjct: 117 WLAVDGLCLMPTLTNLTLEFV 137


>ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313245|gb|EFH43668.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/78 (41%), Positives = 49/78 (62%)
 Frame = -2

Query: 247 DLFLTAGPFCVDWLTKIGNGLKSISISALLVQSYPKPTNILDVISYNCYGLVELTLNNSA 68
           DL+LT   F  +WL ++   L+ +SIS   +QS  + ++IL +IS NC  LV+L + NS 
Sbjct: 103 DLYLTDVEFAKEWLPRVREDLEMLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNSW 162

Query: 67  LCVIDMRQMPLLTRLTLK 14
           L V+ +R+M  L  LTL+
Sbjct: 163 LSVVGLREMSNLRHLTLE 180


>ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Glycine max]
          Length = 453

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -2

Query: 250 DDLFLTAGPFCVDWLTKIGNGLKSISISALLVQSYPKPTNILDVISYNCYGLVELTLNNS 71
           DDL+LT   F  +WL  + + LKS S+S   VQS  + +  L +IS  C  LV+L + N+
Sbjct: 107 DDLYLTDMNFIREWLPSVSDALKSFSVSDFWVQSCWRRSEALSLISSTCRNLVKLVVRNA 166

Query: 70  ALCVIDMRQMPLLTRLTLKDV 8
            L V  +  MP LT LTL+ V
Sbjct: 167 WLSVDGLCLMPTLTYLTLEFV 187


>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = -2

Query: 247 DLFLTAGPFCVDWLTKIGNGLKSISISALLVQSYPKPTNILDVISYNCYGLVELTLNNSA 68
           DL+LT   F  +WL ++   L+++SIS   +QS  + ++IL +IS NC  LV+L + N+ 
Sbjct: 103 DLYLTDVEFVKEWLPRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAW 162

Query: 67  LCVIDMRQMPLLTRLTLK 14
           L V+ + +MP L  LTL+
Sbjct: 163 LSVVGLTEMPNLRYLTLE 180


>dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = -2

Query: 247 DLFLTAGPFCVDWLTKIGNGLKSISISALLVQSYPKPTNILDVISYNCYGLVELTLNNSA 68
           DL+LT   F  +WL ++   L+++SIS   +QS  + ++IL +IS NC  LV+L + N+ 
Sbjct: 103 DLYLTDVEFVKEWLPRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAW 162

Query: 67  LCVIDMRQMPLLTRLTLK 14
           L V+ + +MP L  LTL+
Sbjct: 163 LSVVGLTEMPNLRYLTLE 180


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