BLASTX nr result

ID: Bupleurum21_contig00021718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021718
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278005.2| PREDICTED: probable transcription factor KAN...   272   2e-70
emb|CBI33837.3| unnamed protein product [Vitis vinifera]              272   2e-70
ref|XP_003534288.1| PREDICTED: uncharacterized protein LOC100798...   256   1e-65
ref|XP_002326546.1| predicted protein [Populus trichocarpa] gi|2...   254   3e-65
ref|XP_003612825.1| Two-component response regulator EHD1 [Medic...   250   6e-64

>ref|XP_002278005.2| PREDICTED: probable transcription factor KAN2-like [Vitis vinifera]
          Length = 368

 Score =  272 bits (695), Expect = 2e-70
 Identities = 163/252 (64%), Positives = 182/252 (72%), Gaps = 4/252 (1%)
 Frame = -3

Query: 787 SFPFVQQPCXXXXXXXXXXXXXXXXXXXDRFHSQ-VGFMRSRFLSRFPAKRSMRAPRMRW 611
           SFPF QQP                      F S   G +RSRFLSRFPAKRSMRAPRMRW
Sbjct: 137 SFPFAQQPLDSSIASSTTTNTAATTTGSSPFQSHHQGLIRSRFLSRFPAKRSMRAPRMRW 196

Query: 610 TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAAS- 434
           TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAAS 
Sbjct: 197 TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASS 256

Query: 433 --SDLFENGSSGDTSEDLMFDNNNIQNPRRSQDDESSQQGKSKAHHFDKDLQALWTNSSS 260
             SD++ENGSSGDTSED+MFD   IQNPR+S  + S QQG+   H  +KD   LW+N   
Sbjct: 257 GQSDVYENGSSGDTSEDVMFD---IQNPRKS--ELSIQQGRPNVHQ-EKDYHGLWSN--- 307

Query: 259 SSREAWLHGKQMDCGDNSIPSLYQKEMDGKCVSSYERISEAMSVSTAAAAETSNTLLFCP 80
           SSREAWLHGKQ D G N+ P+L +++MD KC+ SYERIS+   VS++  + TS       
Sbjct: 308 SSREAWLHGKQRDSGGNT-PTL-EEDMDPKCL-SYERISD---VSSSNLSGTS------- 354

Query: 79  KKKPNLEFTLGR 44
            KKPNLEFTLGR
Sbjct: 355 PKKPNLEFTLGR 366


>emb|CBI33837.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  272 bits (695), Expect = 2e-70
 Identities = 163/252 (64%), Positives = 182/252 (72%), Gaps = 4/252 (1%)
 Frame = -3

Query: 787 SFPFVQQPCXXXXXXXXXXXXXXXXXXXDRFHSQ-VGFMRSRFLSRFPAKRSMRAPRMRW 611
           SFPF QQP                      F S   G +RSRFLSRFPAKRSMRAPRMRW
Sbjct: 104 SFPFAQQPLDSSIASSTTTNTAATTTGSSPFQSHHQGLIRSRFLSRFPAKRSMRAPRMRW 163

Query: 610 TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAAS- 434
           TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAAS 
Sbjct: 164 TTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASS 223

Query: 433 --SDLFENGSSGDTSEDLMFDNNNIQNPRRSQDDESSQQGKSKAHHFDKDLQALWTNSSS 260
             SD++ENGSSGDTSED+MFD   IQNPR+S  + S QQG+   H  +KD   LW+N   
Sbjct: 224 GQSDVYENGSSGDTSEDVMFD---IQNPRKS--ELSIQQGRPNVHQ-EKDYHGLWSN--- 274

Query: 259 SSREAWLHGKQMDCGDNSIPSLYQKEMDGKCVSSYERISEAMSVSTAAAAETSNTLLFCP 80
           SSREAWLHGKQ D G N+ P+L +++MD KC+ SYERIS+   VS++  + TS       
Sbjct: 275 SSREAWLHGKQRDSGGNT-PTL-EEDMDPKCL-SYERISD---VSSSNLSGTS------- 321

Query: 79  KKKPNLEFTLGR 44
            KKPNLEFTLGR
Sbjct: 322 PKKPNLEFTLGR 333


>ref|XP_003534288.1| PREDICTED: uncharacterized protein LOC100798081 [Glycine max]
          Length = 390

 Score =  256 bits (653), Expect = 1e-65
 Identities = 149/225 (66%), Positives = 169/225 (75%), Gaps = 5/225 (2%)
 Frame = -3

Query: 697 FHSQVGFMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD 518
           FHSQ   MRSRFLSRFPAKRSMRAPRMRWT+TLHARFVHAVELLGGHERATPKSVLELMD
Sbjct: 186 FHSQA-LMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMD 244

Query: 517 VKDLTLAHVKSHLQMYRTVKTTDRAAAS---SDLFENGSSGDTSEDLMFDNNNIQNPRRS 347
           VKDLTLAHVKSHLQMYRTVKTTDRAAAS   SD+++NGSSGDTS+DLMFD   I++ RRS
Sbjct: 245 VKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFD---IKSSRRS 301

Query: 346 QDDESSQQGKSKAHHFDKDLQALWTNSSSSSREAWLHGKQMDCGDNSIPSLYQKEMDGKC 167
             D S +QG+S  +  DK+   LW N   SSREAWLHGK       ++P   +KEMD KC
Sbjct: 302 --DLSVKQGRSSVNQ-DKEYHGLWGN---SSREAWLHGKTKTDSVGNVPFSLEKEMDPKC 355

Query: 166 VSSYERISEAMSVSTAAAAETSNTLLFCPKKKPN--LEFTLGRPL 38
           + SYERIS+  S S  + +           KKPN  LEF+LG+PL
Sbjct: 356 L-SYERISDGSSSSNLSGSS---------PKKPNLDLEFSLGQPL 390


>ref|XP_002326546.1| predicted protein [Populus trichocarpa] gi|222833868|gb|EEE72345.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  254 bits (649), Expect = 3e-65
 Identities = 150/217 (69%), Positives = 165/217 (76%), Gaps = 3/217 (1%)
 Frame = -3

Query: 682 GFMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLT 503
           G MRSRF+SRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPK VLELMDVKDLT
Sbjct: 181 GLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKLVLELMDVKDLT 240

Query: 502 LAHVKSHLQMYRTVKTTDRAA---ASSDLFENGSSGDTSEDLMFDNNNIQNPRRSQDDES 332
           LAHVKSHLQMYRTVKT    A   A SD+F+NGSSGDTSED M D   IQNPRR   D S
Sbjct: 241 LAHVKSHLQMYRTVKTDKAGAAPSAQSDVFDNGSSGDTSEDFMLD---IQNPRRL--DIS 295

Query: 331 SQQGKSKAHHFDKDLQALWTNSSSSSREAWLHGKQMDCGDNSIPSLYQKEMDGKCVSSYE 152
            QQG+  AH  DKD  ALW+N  SSSREA LHGK  D G N +PSL +K++D KC+ SYE
Sbjct: 296 KQQGRPGAHQ-DKDYHALWSN--SSSREAGLHGKLKDSGGN-LPSL-EKDVDPKCL-SYE 349

Query: 151 RISEAMSVSTAAAAETSNTLLFCPKKKPNLEFTLGRP 41
           R     ++S  +++  S T L    KKPNLEFTLGRP
Sbjct: 350 R-----NISDVSSSTLSGTSL----KKPNLEFTLGRP 377


>ref|XP_003612825.1| Two-component response regulator EHD1 [Medicago truncatula]
           gi|355514160|gb|AES95783.1| Two-component response
           regulator EHD1 [Medicago truncatula]
          Length = 402

 Score =  250 bits (638), Expect = 6e-64
 Identities = 148/225 (65%), Positives = 164/225 (72%), Gaps = 5/225 (2%)
 Frame = -3

Query: 697 FHSQVGFMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD 518
           F SQ   MRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD
Sbjct: 197 FQSQA-LMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD 255

Query: 517 VKDLTLAHVKSHLQMYRTVKTTDRAAAS---SDLFENGSSGDTSEDLMFDNNNIQNPRRS 347
           VKDLTLAHVKSHLQMYRTVKTTDR  AS   SD+++NGSSGD S+D+MFD   I + RRS
Sbjct: 256 VKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFD---INSSRRS 312

Query: 346 QDDESSQQGKSKAHHFDKDLQALWTNSSSSSREAWLHGKQMDCGDNSIPSLYQKEMDGKC 167
            D    QQG+S  +  DK+   LW+N   SSREAWLHGK       ++ SL +KEMD KC
Sbjct: 313 SDLSIKQQGRSSVNQ-DKECYGLWSN---SSREAWLHGKPKVDSIGNMQSL-EKEMDPKC 367

Query: 166 VSSYERISEAMSVSTAAAAETSNTLLFCPKKKPN--LEFTLGRPL 38
           + SYERIS+  S         S  L     KKPN  LEFTLG+PL
Sbjct: 368 L-SYERISDGSS---------STNLSGSSPKKPNLDLEFTLGQPL 402


Top