BLASTX nr result

ID: Bupleurum21_contig00021717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021717
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32285.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002520708.1| conserved hypothetical protein [Ricinus comm...   144   1e-32
emb|CAA09791.1| NDX1 homeobox protein [Lotus japonicus]               134   1e-29
ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28

>emb|CBI32285.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  154 bits (390), Expect = 7e-36
 Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 4/161 (2%)
 Frame = +3

Query: 3   LQHGEFVSNWCASXXXXXXXXXXXXYDPSVAAEWVLRSLS--DITVTLSSESTYAPCNMA 176
           L HGEF+S+WC+S            YDP VAA WVL S S  D+   +SSEST+   NM+
Sbjct: 389 LPHGEFLSSWCSSDLPVREEDASLEYDPFVAAGWVLDSFSSPDLLNLMSSESTFIQNNMS 448

Query: 177 QISYAHERTSLLVKVIANLHCFAPNISED-EKDLFLNSLFSHLQKEISKLS-DGAAEKAS 350
           Q  YAH+RTSLLVKVIANLHCF PNI E+ EKDLFL+     LQ E  + S    A+KA+
Sbjct: 449 QAPYAHQRTSLLVKVIANLHCFVPNICEEQEKDLFLHKCLECLQMERPRFSFSSDAQKAA 508

Query: 351 NINKNLCSLLTHAESLISGFLLEEDVQLLRLFVCQLNKLIT 473
            + KNL SLL HAESLI  FL EEDVQLLR+F  ++  LIT
Sbjct: 509 TVCKNLRSLLGHAESLIPLFLNEEDVQLLRVFFKEIQSLIT 549


>ref|XP_002520708.1| conserved hypothetical protein [Ricinus communis]
           gi|223540093|gb|EEF41670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 957

 Score =  144 bits (363), Expect = 1e-32
 Identities = 87/177 (49%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
 Frame = +3

Query: 3   LQHGEFVSNWCASXXXXXXXXXXXXYDPSVAAEWVLRSLSDITVT--LSSESTYAPCNMA 176
           L HGEF+S WC+S            +D  +AA WVL ++S + ++  L+SE T  P NM 
Sbjct: 393 LPHGEFLSIWCSSELPLREEDATLEFDIFIAAGWVLDTISSLNLSNALNSEITLIPSNMP 452

Query: 177 QISYAHERTSLLVKVIANLHCFAPNISED-EKDLFLNSLF-------SHLQKEISKLSDG 332
           Q +YAH+RTSL VKVIANLHCF PNI E+ E++LFL+          S    E S  SD 
Sbjct: 453 QATYAHQRTSLFVKVIANLHCFVPNICEEQERNLFLHKFLECMRMDPSETLPEFSFTSD- 511

Query: 333 AAEKASNINKNLCSLLTHAESLISGFLLEEDVQLLRLFVCQLNKLITTAHTSTNHAQ 503
            A KA+ + +NL SLL+HAESLI  FL EEDVQLLR+F  QL  LI TA    N  Q
Sbjct: 512 -ANKANTVCRNLRSLLSHAESLIPNFLNEEDVQLLRVFFNQLQSLINTADFEQNQVQ 567


>emb|CAA09791.1| NDX1 homeobox protein [Lotus japonicus]
          Length = 958

 Score =  134 bits (336), Expect = 1e-29
 Identities = 76/175 (43%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
 Frame = +3

Query: 3   LQHGEFVSNWCASXXXXXXXXXXXXYDPSVAAEWVLRSLS--DITVTLSSESTYAPCNMA 176
           L HG+F+S WC+S            YD   A  WVL + S  D+      E    P  ++
Sbjct: 399 LSHGDFLSCWCSSNLPEIEEDASLEYDTFAAVGWVLDNTSSQDLPNATILEFNLVPNRVS 458

Query: 177 QISYAHERTSLLVKVIANLHCFAPNISED-EKDLFLNSLFSHLQKEISKLSDGAA----- 338
            +SYAH RTS  VK+IANLHCF PNI E+ E++LF+  +  +LQ ++S L  G +     
Sbjct: 459 SVSYAHHRTSFFVKIIANLHCFVPNICEEQERNLFVLKVLEYLQMDLSNLLPGFSFASDV 518

Query: 339 EKASNINKNLCSLLTHAESLISGFLLEEDVQLLRLFVCQLNKLITTAHTSTNHAQ 503
            KA+ ++KNL SLL+HAESLI  FL EEDV LLR+F+ +L  L T+     NH Q
Sbjct: 519 PKAATVSKNLRSLLSHAESLIPKFLNEEDVHLLRVFLGELQSLFTSTGIGGNHVQ 573


>ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|222844542|gb|EEE82089.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score =  133 bits (335), Expect = 2e-29
 Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 8/175 (4%)
 Frame = +3

Query: 3   LQHGEFVSNWCASXXXXXXXXXXXXYDPSVAAEWVLRSLS--DITVTLSSESTYAPCNMA 176
           L HG+F+S WC+S            YD   AA W L + +  +++  ++ E T  P NM 
Sbjct: 419 LPHGDFLSIWCSSEFPPREEDATLEYDTFAAAGWFLDTFAAANLSNAINLEITLIPSNMP 478

Query: 177 QISYAHERTSLLVKVIANLHCFAPNISED-EKDLFLNSLFSHLQKEISKLSDG-----AA 338
           Q  YAH+RTSL VK+IANLHCF PNI E+ E++LFL+     ++ + SK   G      A
Sbjct: 479 QAMYAHQRTSLFVKLIANLHCFVPNICEEQERNLFLHKFLECMRMDPSKSLPGFSFTSGA 538

Query: 339 EKASNINKNLCSLLTHAESLISGFLLEEDVQLLRLFVCQLNKLITTAHTSTNHAQ 503
           ++A  + +NL SLL+HAESLI  FL EEDVQLLR+F  QL  LI  A    N  Q
Sbjct: 539 QRAVTVCRNLRSLLSHAESLIPNFLNEEDVQLLRVFFNQLQSLINPADFEENQVQ 593


>ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|222861152|gb|EEE98694.1|
            predicted protein [Populus trichocarpa]
          Length = 1326

 Score =  130 bits (326), Expect = 2e-28
 Identities = 81/191 (42%), Positives = 106/191 (55%), Gaps = 11/191 (5%)
 Frame = +3

Query: 3    LQHGEFVSNWCASXXXXXXXXXXXXYDPSVAAEWVLRSLSDITVT--LSSESTYAPCNMA 176
            L HG+F+S WC+S            YD   AA W L + +    +  ++ E T  P NM 
Sbjct: 524  LPHGDFLSIWCSSEFPPREEDGTLEYDAFTAAGWFLDTFAAANQSNAINLEITLIPSNMP 583

Query: 177  QISYAHERTSLLVKVIANLHCFAPNISED-EKDLFLNSLFSHLQKEISKLSDG-----AA 338
            Q  YAH+RTSL VK+IANLHCF PNI E+ E++LFL+     ++ + SK   G      A
Sbjct: 584  QAMYAHQRTSLFVKLIANLHCFVPNICEEQERNLFLHKFLECMRMDPSKSLPGFSFTSGA 643

Query: 339  EKASNINKNLCSLLTHAESLISGFLLEEDVQLLRLFVCQLNKLITTAHTSTNHAQ---SE 509
             +A  + +NL SLL+HAESLI  FL EEDVQLLR+F  QL  LI       N  Q   SE
Sbjct: 644  LRAGTVCRNLRSLLSHAESLIPNFLNEEDVQLLRVFFNQLQSLINPTDFEENQVQEIKSE 703

Query: 510  AD*SVHRPCNM 542
               S+ + C +
Sbjct: 704  RSISLDKFCRL 714


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