BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021700
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   441   e-121
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              437   e-120
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   426   e-117
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...   423   e-116
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li...   421   e-115

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/310 (70%), Positives = 261/310 (84%), Gaps = 9/310 (2%)
 Frame = -2

Query: 905 MREINLPMNQTQKVRLQKALDALETFXXXXXXXXSVTVADTIPVNHEDGILKGHGTTDHD 726
           MR   L +NQTQK+RLQ+AL+ LE+         SV VADTIPVN+EDG+LKGHGT D D
Sbjct: 1   MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 725 GELVATVCGVVERVNKLVYVRSLRARYKPEIGDIIIGRVKEVAPKRWRLEINFSQDAVLM 546
           GE+VAT+CGVVERVNKLVY+R+LRARYKPE GDII+GRV E+APKRWRL+INFSQDAVLM
Sbjct: 61  GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 545 LSSMNLPDGIQRRRTAVDELNMRSIFEEEDVVCAEVRGFQHDGSLHLQARSQKYGKLERG 366
           LSSMNLPDGIQRRRTAVDELNMRSIFEE D+VCAEVRGFQHDGSLHLQARSQKYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 365 QLLTVPPYLVKRRKQHFHYLEQYGIDLILGCNGYIWIGEHVDSKDDMMEDQLN------- 207
           Q+LT+ PYLVKRRKQH HYLE++G+DLILGCNG+IW+GEHV++K  ++EDQ +       
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240

Query: 206 -ASPGSIPSFKDKEPIYTASEIRQNICRTANAVRVLSTLGFTITLDVIIETVKLSTSLH- 33
            +S  +  S +++E  YT+ E RQNICR ANAVRVL+ LGF++T++VI ETV LS+SL+ 
Sbjct: 241 KSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNL 300

Query: 32  DIHLMLDAEF 3
           DIH ML +EF
Sbjct: 301 DIHEMLGSEF 310


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  437 bits (1124), Expect = e-120
 Identities = 218/302 (72%), Positives = 257/302 (85%), Gaps = 1/302 (0%)
 Frame = -2

Query: 905 MREINLPMNQTQKVRLQKALDALETFXXXXXXXXSVTVADTIPVNHEDGILKGHGTTDHD 726
           MR   L +NQTQK+RLQ+AL+ LE+         SV VADTIPVN+EDG+LKGHGT D D
Sbjct: 1   MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 725 GELVATVCGVVERVNKLVYVRSLRARYKPEIGDIIIGRVKEVAPKRWRLEINFSQDAVLM 546
           GE+VAT+CGVVERVNKLVY+R+LRARYKPE GDII+GRV E+APKRWRL+INFSQDAVLM
Sbjct: 61  GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 545 LSSMNLPDGIQRRRTAVDELNMRSIFEEEDVVCAEVRGFQHDGSLHLQARSQKYGKLERG 366
           LSSMNLPDGIQRRRTAVDELNMRSIFEE D+VCAEVRGFQHDGSLHLQARSQKYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 365 QLLTVPPYLVKRRKQHFHYLEQYGIDLILGCNGYIWIGEHVDSKDDMMEDQLNASPGSIP 186
           Q+LT+ PYLVKRRKQH HYLE++G+DLILGCNG+IW+GEHV++K  ++EDQ + +     
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQL-- 238

Query: 185 SFKDKEPIYTASEIRQNICRTANAVRVLSTLGFTITLDVIIETVKLSTSLH-DIHLMLDA 9
           + K  +  YT+ E RQNICR ANAVRVL+ LGF++T++VI ETV LS+SL+ DIH ML +
Sbjct: 239 NTKSSKRTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNLDIHEMLGS 298

Query: 8   EF 3
           EF
Sbjct: 299 EF 300


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  426 bits (1095), Expect = e-117
 Identities = 216/309 (69%), Positives = 258/309 (83%), Gaps = 8/309 (2%)
 Frame = -2

Query: 905 MREINLPMNQTQKVRLQKALDALETFXXXXXXXXSVTVADTIPVNHEDGILKGHGTTDHD 726
           MREI LP++QTQKVRLQKAL+ LE+         SV +AD+I VNHEDG+LKGHGT D +
Sbjct: 1   MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN 60

Query: 725 GELVATVCGVVERVNKLVYVRSLRARYKPEIGDIIIGRVKEVAPKRWRLEINFSQDAVLM 546
           GE+VAT+CGVVERVNKLVYVR+LR+RYKPE+GDI+IGRV EVA KRWRLEIN++QDAVL+
Sbjct: 61  GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL 120

Query: 545 LSSMNLPDGIQRRRTAVDELNMRSIFEEEDVVCAEVRGFQHDGSLHLQARSQKYGKLERG 366
           LSSMN+PDG+QRRRTAVDELNMR IFEE DVVCAEVRGFQHDG LHLQARS+KYGKL RG
Sbjct: 121 LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDG-LHLQARSRKYGKLNRG 179

Query: 365 QLLTVPPYLVKRRKQHFHYLEQYGIDLILGCNGYIWIGEHVDSKDDMMEDQLNASPGSI- 189
           QLLTVPPYLVKR+KQHFH+LE++GIDLILGCNG+IW+GEHV++KDDM+EDQ++ S   + 
Sbjct: 180 QLLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVL 239

Query: 188 ------PSFKDKEPIYTASEIRQNICRTANAVRVLSTLGFTITLDVIIETVKLSTSLH-D 30
                  S +++E  YT  E R+ I R ANAVRVLSTLGF ITL++I   + LS S++ D
Sbjct: 240 FPNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLD 299

Query: 29  IHLMLDAEF 3
           IH ML +EF
Sbjct: 300 IHDMLGSEF 308


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score =  423 bits (1088), Expect = e-116
 Identities = 214/309 (69%), Positives = 255/309 (82%), Gaps = 8/309 (2%)
 Frame = -2

Query: 905 MREINLPMNQTQKVRLQKALDALETFXXXXXXXXSVTVADTIPVNHEDGILKGHGTTDHD 726
           M+ + L +N TQK+RL++A + L++         SV VADTIP+N+EDG+LKGHGT D +
Sbjct: 1   MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 725 GELVATVCGVVERVNKLVYVRSLRARYKPEIGDIIIGRVKEVAPKRWRLEINFSQDAVLM 546
           GE+VA++CGVVERVNKL+YVR+LRARYKPE+GDI++GRV EVAPKRWRL+IN+ QDAVLM
Sbjct: 61  GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120

Query: 545 LSSMNLPDGIQRRRTAVDELNMRSIFEEEDVVCAEVRGFQHDGSLHLQARSQKYGKLERG 366
           LSSMNLPDGIQRRRTAVDELNMRSIFEE DV+CAEVRG QHDG LHLQARSQKYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERG 179

Query: 365 QLLTVPPYLVKRRKQHFHYLEQYGIDLILGCNGYIWIGEHVDSK--DDMMEDQLNASPGS 192
           QLLTV PYL+KRRKQHFH+LEQYGIDLILGCNG+IWIGEHVD K  D M+EDQ++     
Sbjct: 180 QLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQK 239

Query: 191 IPSFK-----DKEPIYTASEIRQNICRTANAVRVLSTLGFTITLDVIIETVKLSTSLH-D 30
              F+       + +YT  E RQNICRTANA+RVLSTLGF +T++VI+E V LS SL+ D
Sbjct: 240 GSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID 299

Query: 29  IHLMLDAEF 3
           +H ML +EF
Sbjct: 300 VHEMLGSEF 308


>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
           distachyon]
          Length = 319

 Score =  421 bits (1081), Expect = e-115
 Identities = 214/308 (69%), Positives = 252/308 (81%), Gaps = 7/308 (2%)
 Frame = -2

Query: 905 MREINLPMNQTQKVRLQKALDALETFXXXXXXXXSVTVADTIPVNHEDGILKGHGTTDHD 726
           MR+++LP+NQTQ+VRL+ AL  L++         SVTVAD IPVN ED ILKGHGT+DHD
Sbjct: 1   MRDLHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDNILKGHGTSDHD 60

Query: 725 GELVATVCGVVERVNKLVYVRSLRARYKPEIGDIIIGRVKEVAPKRWRLEINFSQDAVLM 546
           GE+VAT+CGVVERVNKLVYVR+LRARYKPE+GDII+GRV E+APKRWRLEINFSQDAVLM
Sbjct: 61  GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120

Query: 545 LSSMNLPDGIQRRRTAVDELNMRSIFEEEDVVCAEVRGFQHDGSLHLQARSQKYGKLERG 366
           LSSMNLPDGIQRRRTAVDELNMRSIFEE DVVCAEVRGFQHDGSLHLQARSQKYGKL+RG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRG 180

Query: 365 QLLTVPPYLVKRRKQHFHYLEQYGIDLILGCNGYIWIGEHV------DSKDDMMEDQLNA 204
           QLLTVP YLVKRRKQHFH+LEQY +DLILGCNG++W+G+HV      +SK+D  +     
Sbjct: 181 QLLTVPAYLVKRRKQHFHHLEQYDVDLILGCNGFVWVGQHVLVRENTESKEDKQK----- 235

Query: 203 SPGSIPSFKDKEPIYTASEIRQNICRTANAVRVLSTLGFTITLDVIIETVKLSTSLH-DI 27
                    D+   +T  E R++ICR ANAVRVLS LGFT+T+++II+T + S S + +I
Sbjct: 236 -------LSDEVDTFTPIETRKHICRLANAVRVLSALGFTLTIELIIQTAEASLSSNVEI 288

Query: 26  HLMLDAEF 3
           + ML AEF
Sbjct: 289 NDMLGAEF 296