BLASTX nr result

ID: Bupleurum21_contig00021697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021697
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314895.1| white-brown-complex ABC transporter family [...   362   9e-98
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   356   4e-96
ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   355   8e-96
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              355   8e-96
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   355   8e-96

>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222863935|gb|EEF01066.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 683

 Score =  362 bits (928), Expect = 9e-98
 Identities = 179/264 (67%), Positives = 200/264 (75%)
 Frame = +3

Query: 3    WLQFNVLLVRGLRERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGXXXXXXXX 182
            W QF VLL RGL+ERKHESYSGLRIFQV+SVSILSGLLWWHSDTSHIQDQVG        
Sbjct: 418  WQQFKVLLRRGLQERKHESYSGLRIFQVISVSILSGLLWWHSDTSHIQDQVGLLFFFSIF 477

Query: 183  XXXXXXXNAIFAFPQERPMLTXXXXXXXXXXXXXXFARIAGDLPMELILPTIFVTITYWM 362
                   NAIFAFPQERPML               FAR+AGDLPMEL++PTIFVT+TYWM
Sbjct: 478  WGFFPLFNAIFAFPQERPMLIKERSSGMYRLSSYYFARMAGDLPMELVMPTIFVTVTYWM 537

Query: 363  GGLKPSFLAFSLTLSIILFNVLVSQGLGLALGAILMDLKKATAXXXXXXXXXXXXGGYYI 542
            GGLKPS + F LTL +ILFNVLVSQGLGLALGAILMD+K+AT             GGYYI
Sbjct: 538  GGLKPSLITFVLTLLVILFNVLVSQGLGLALGAILMDVKQATTLASVTMLVFLLAGGYYI 597

Query: 543  QQMPIFIAWLKYMSFSHYCYKLLVGVQYTKDEVYECALGVHCRVEDFPAIKVVGIGNMGW 722
            Q +P FIAWLKY+SFSHYCYKLLVGVQY+  EVY+C L +HCRV DFPAIK +G+ NM W
Sbjct: 598  QHIPPFIAWLKYISFSHYCYKLLVGVQYSATEVYDCGLQMHCRVMDFPAIKYLGLDNMWW 657

Query: 723  DVAALTVMLVGYRVLAYIGLKRSQ 794
            D AALT+MLVGYR+LAY+ L+  Q
Sbjct: 658  DAAALTIMLVGYRLLAYVALRMGQ 681


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536342|gb|EEF37992.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 709

 Score =  356 bits (914), Expect = 4e-96
 Identities = 176/264 (66%), Positives = 197/264 (74%)
 Frame = +3

Query: 3    WLQFNVLLVRGLRERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGXXXXXXXX 182
            W QF VLL RGL+ERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVG        
Sbjct: 444  WQQFKVLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIF 503

Query: 183  XXXXXXXNAIFAFPQERPMLTXXXXXXXXXXXXXXFARIAGDLPMELILPTIFVTITYWM 362
                   NAIFAFPQERP+L               FAR+AGDLPMEL++P IFVT+ YWM
Sbjct: 504  WGFFPLFNAIFAFPQERPILIKERSSGMYRLSSYYFARMAGDLPMELVMPIIFVTVAYWM 563

Query: 363  GGLKPSFLAFSLTLSIILFNVLVSQGLGLALGAILMDLKKATAXXXXXXXXXXXXGGYYI 542
            GGLKPS + F LTL IILFNVLVSQGLGLALGA+LMD+K+ T             GGYYI
Sbjct: 564  GGLKPSLITFVLTLLIILFNVLVSQGLGLALGAVLMDVKQGTTLASVTMLVFLLAGGYYI 623

Query: 543  QQMPIFIAWLKYMSFSHYCYKLLVGVQYTKDEVYECALGVHCRVEDFPAIKVVGIGNMGW 722
            Q +P FIAWLKY+SFSHYCYKLLVGVQY+ +EVYEC  G+HCRV DFPAI+ +G+ NM W
Sbjct: 624  QHIPAFIAWLKYISFSHYCYKLLVGVQYSVNEVYECEAGMHCRVMDFPAIRYLGLDNMWW 683

Query: 723  DVAALTVMLVGYRVLAYIGLKRSQ 794
            DVAAL +MLVGYR LAY+ L+  Q
Sbjct: 684  DVAALLIMLVGYRFLAYVALRMGQ 707


>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
            21-like [Vitis vinifera]
          Length = 677

 Score =  355 bits (911), Expect = 8e-96
 Identities = 178/265 (67%), Positives = 197/265 (74%)
 Frame = +3

Query: 3    WLQFNVLLVRGLRERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGXXXXXXXX 182
            W QF VLL RGL+ERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVG        
Sbjct: 412  WEQFKVLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIF 471

Query: 183  XXXXXXXNAIFAFPQERPMLTXXXXXXXXXXXXXXFARIAGDLPMELILPTIFVTITYWM 362
                   NAIF FPQERPML               FAR+AGDLPMEL+LPTIFVTI YWM
Sbjct: 472  WGFFPLFNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWM 531

Query: 363  GGLKPSFLAFSLTLSIILFNVLVSQGLGLALGAILMDLKKATAXXXXXXXXXXXXGGYYI 542
            GGLKPS L F LTL +IL+NVLVSQGLGLALGAI+MD+K+ TA            GGYYI
Sbjct: 532  GGLKPSLLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYI 591

Query: 543  QQMPIFIAWLKYMSFSHYCYKLLVGVQYTKDEVYECALGVHCRVEDFPAIKVVGIGNMGW 722
            Q +P FIAWLKY+SFSHYCYKLLVGVQY ++EVYEC L +HC+V +FPAIK +GI +  W
Sbjct: 592  QHIPPFIAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAW 651

Query: 723  DVAALTVMLVGYRVLAYIGLKRSQY 797
            DVAALTVM VGYR LAY  L+  Q+
Sbjct: 652  DVAALTVMFVGYRALAYAALRMGQH 676


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  355 bits (911), Expect = 8e-96
 Identities = 178/265 (67%), Positives = 197/265 (74%)
 Frame = +3

Query: 3    WLQFNVLLVRGLRERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGXXXXXXXX 182
            W QF VLL RGL+ERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVG        
Sbjct: 411  WEQFKVLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIF 470

Query: 183  XXXXXXXNAIFAFPQERPMLTXXXXXXXXXXXXXXFARIAGDLPMELILPTIFVTITYWM 362
                   NAIF FPQERPML               FAR+AGDLPMEL+LPTIFVTI YWM
Sbjct: 471  WGFFPLFNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWM 530

Query: 363  GGLKPSFLAFSLTLSIILFNVLVSQGLGLALGAILMDLKKATAXXXXXXXXXXXXGGYYI 542
            GGLKPS L F LTL +IL+NVLVSQGLGLALGAI+MD+K+ TA            GGYYI
Sbjct: 531  GGLKPSLLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYI 590

Query: 543  QQMPIFIAWLKYMSFSHYCYKLLVGVQYTKDEVYECALGVHCRVEDFPAIKVVGIGNMGW 722
            Q +P FIAWLKY+SFSHYCYKLLVGVQY ++EVYEC L +HC+V +FPAIK +GI +  W
Sbjct: 591  QHIPPFIAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAW 650

Query: 723  DVAALTVMLVGYRVLAYIGLKRSQY 797
            DVAALTVM VGYR LAY  L+  Q+
Sbjct: 651  DVAALTVMFVGYRALAYAALRMGQH 675


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  355 bits (911), Expect = 8e-96
 Identities = 178/265 (67%), Positives = 197/265 (74%)
 Frame = +3

Query: 3    WLQFNVLLVRGLRERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGXXXXXXXX 182
            W QF VLL RGL+ERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVG        
Sbjct: 431  WEQFKVLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSDTSHIQDQVGLLFFFSIF 490

Query: 183  XXXXXXXNAIFAFPQERPMLTXXXXXXXXXXXXXXFARIAGDLPMELILPTIFVTITYWM 362
                   NAIF FPQERPML               FAR+AGDLPMEL+LPTIFVTI YWM
Sbjct: 491  WGFFPLFNAIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWM 550

Query: 363  GGLKPSFLAFSLTLSIILFNVLVSQGLGLALGAILMDLKKATAXXXXXXXXXXXXGGYYI 542
            GGLKPS L F LTL +IL+NVLVSQGLGLALGAI+MD+K+ TA            GGYYI
Sbjct: 551  GGLKPSLLTFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYI 610

Query: 543  QQMPIFIAWLKYMSFSHYCYKLLVGVQYTKDEVYECALGVHCRVEDFPAIKVVGIGNMGW 722
            Q +P FIAWLKY+SFSHYCYKLLVGVQY ++EVYEC L +HC+V +FPAIK +GI +  W
Sbjct: 611  QHIPPFIAWLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGIDHWAW 670

Query: 723  DVAALTVMLVGYRVLAYIGLKRSQY 797
            DVAALTVM VGYR LAY  L+  Q+
Sbjct: 671  DVAALTVMFVGYRALAYAALRMGQH 695


Top