BLASTX nr result

ID: Bupleurum21_contig00021694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021694
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK43221.1| myb-related transcription factor [Panax ginseng]        60   2e-07

>gb|ACK43221.1| myb-related transcription factor [Panax ginseng]
          Length = 238

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 48/135 (35%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
 Frame = +1

Query: 1   EIKNVWHTHIKKKLG--KSKSQVVNSVFSTCKEIDSFGSVWSQNSS-----ELSSPICSS 159
           EIKNVWHTH+KKKL   +  SQVV    S  K        +S         + SS   SS
Sbjct: 103 EIKNVWHTHLKKKLKNYQPSSQVVTKQQSMIKSNGHKNPDFSARPEVCGPPQGSSSELSS 162

Query: 160 VPTTSNIVEQEQL-----------------------KFLEMRTADQDLKRLKRDEGMDFW 270
           V   +  V+QEQ+                       +F E R  +  L     ++GMDFW
Sbjct: 163 VTVMTTAVKQEQMDSSESTFPEIDESFWTQAEDSKMEFSEFRGPNDKLGCQMIEDGMDFW 222

Query: 271 YDLFKRAENLSELPE 315
           Y+LF RA  L ELPE
Sbjct: 223 YNLFIRAGELPELPE 237


Top