BLASTX nr result

ID: Bupleurum21_contig00021684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021684
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|2...   103   4e-20
ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
gb|ABK95062.1| unknown [Populus trichocarpa]                           97   5e-18
ref|XP_003539085.1| PREDICTED: GATA transcription factor 26-like...    94   3e-17
ref|XP_002273343.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...    92   2e-16

>ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|222833801|gb|EEE72278.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/146 (43%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
 Frame = +3

Query: 3   SSWVEQYNLLKDSKCXXXXXXXXXXXXXXXXXXXQSLEMRRPCHSQPQKFPVSGGSK--- 173
           S WVE+Y+LLK  K                      +  +R   +  QKF  +   K   
Sbjct: 392 SKWVERYHLLKKCKNSTGKSLVGKGPNPNVVASSNLIGAKRSRDNLSQKFSEAKSMKSPK 451

Query: 174 --VAKTSYGLKAPTDKDSTCFGTKSLLAPPPDSTSHMLDCFQFADESSDHDLLLNITSNS 347
             V K +Y +K   D D +CF  +SL A PPD +S MLD   F DESSD DLLL+I SN 
Sbjct: 452 RIVMKATYEIKELIDNDGSCFSPRSLFALPPDGSSLMLDSLHFVDESSDQDLLLDIPSNG 511

Query: 348 SFPQAELLLP-NSGFGAQASTSSSSV 422
           SF QAELL P N+ FG QASTSSSS+
Sbjct: 512 SFAQAELLYPTNNSFGQQASTSSSSI 537


>ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|222870314|gb|EEF07445.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 61/145 (42%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
 Frame = +3

Query: 3   SSWVEQYNLLKDSKCXXXXXXXXXXXXXXXXXXXQSLEMRRPCHSQPQKFPVSGGSK--- 173
           S WVE+Y+LLK  K                         +R   S  QKF      K   
Sbjct: 385 SKWVERYHLLKKCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKLMKSPK 444

Query: 174 --VAKTSYGLKAPTDKDSTCFGTKSLLAPPPDSTSHMLDCFQFADESSDHDLLLNITSNS 347
             + K +Y  K   D D +CF  +SL A P D +S MLD   F DESSD DLLL+I SN 
Sbjct: 445 RIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNG 504

Query: 348 SFPQAELLLPNSGFGAQASTSSSSV 422
           SF QAEL  P + FG QASTSSSS+
Sbjct: 505 SFAQAELFYPTNSFGQQASTSSSSI 529


>gb|ABK95062.1| unknown [Populus trichocarpa]
          Length = 540

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 61/145 (42%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
 Frame = +3

Query: 3   SSWVEQYNLLKDSKCXXXXXXXXXXXXXXXXXXXQSLEMRRPCHSQPQKFPVSGGSK--- 173
           S WVE+Y+LLK  K                         +R   S  QKF      K   
Sbjct: 389 SKWVERYHLLKKCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKLMKSPK 448

Query: 174 --VAKTSYGLKAPTDKDSTCFGTKSLLAPPPDSTSHMLDCFQFADESSDHDLLLNITSNS 347
             + K +Y  K   D D +CF  +SL A P D +S MLD   F DESSD DLLL+I SN 
Sbjct: 449 RIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNG 508

Query: 348 SFPQAELLLPNSGFGAQASTSSSSV 422
           SF QAEL  P + FG QASTSSSS+
Sbjct: 509 SFAQAELFYPTNSFGQQASTSSSSI 533


>ref|XP_003539085.1| PREDICTED: GATA transcription factor 26-like [Glycine max]
          Length = 551

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 61/157 (38%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
 Frame = +3

Query: 3   SSWVEQYNLLKDSKCXXXXXXXXXXXXXXXXXXXQS------LEMRRPCHSQPQKFPV-- 158
           S WVE +N LK  K                     +        ++R C S+ Q FP   
Sbjct: 394 SKWVEHHNFLKKYKNKAVKSNTMGSTGTASINVLNNRASTNVANIKRMCDSRNQNFPELK 453

Query: 159 ----SGGSKVAKTSYGLKAPTDKDSTCFGTKSLLAPPPDSTSHMLDCFQFADESSDHDLL 326
               S    + K S+  K   + D  C+  K L A PPD++S +LD F F +ES D DLL
Sbjct: 454 TIMRSPKRMITKASFECKEAVE-DGACYSPKHLFALPPDASSLLLDSFNFVEESGDQDLL 512

Query: 327 LNITSNSSFPQAELLLPNSGFGAQASTSSSSVCRNNV 437
           L + SN+SFPQAELL P    GAQAST SSSV  N V
Sbjct: 513 LEVPSNTSFPQAELLHPTLSLGAQASTGSSSVYSNLV 549


>ref|XP_002273343.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 26 [Vitis
           vinifera]
          Length = 433

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 58/143 (40%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   SSWVEQYNLLKDSKCXXXXXXXXXXXXXXXXXXXQSLEMRRPCHSQPQKFPVSGGSKVAK 182
           S WVE YNLLK  KC                        +R   +Q Q F  +  +  + 
Sbjct: 284 SKWVEHYNLLK--KCKNSTGVSVVAGEPKAIAASNFANAKRSRDAQNQNFSEARTTMKSP 341

Query: 183 TSYGLKAPT----DKDSTCFGTKSLLAPPPDSTSHMLDCFQFADESSDHDLLLNITSNSS 350
               +KA      D + + F  +SL A PPD  S  LD F F DE SDHDLLL++ SN+S
Sbjct: 342 RRVIMKAVEKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNS 401

Query: 351 FPQAELLLPNSGFGAQASTSSSS 419
           FPQAELL P SGFG Q  ++SSS
Sbjct: 402 FPQAELLHPGSGFGTQLQSTSSS 424


Top