BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021662
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   167   1e-39
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar...   144   6e-33
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ...   140   8e-32

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/105 (73%), Positives = 90/105 (85%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           +FN MN +DI+SWN+MISAYAQHG+G +A   F+ MQDS G+KPD+AT+TAVLSACSHAG
Sbjct: 540 IFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAG 599

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAERLI 1
           L+DDG  IFNSMVN YGFEP  DH SCIVDLLGRAG+L+ AERLI
Sbjct: 600 LVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLI 644


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/105 (73%), Positives = 90/105 (85%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           +FN MN +DI+SWN+MISAYAQHG+G +A   F+ MQDS G+KPD+AT+TAVLSACSHAG
Sbjct: 501 IFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAG 560

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAERLI 1
           L+DDG  IFNSMVN YGFEP  DH SCIVDLLGRAG+L+ AERLI
Sbjct: 561 LVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLI 605


>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/105 (70%), Positives = 90/105 (85%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           VF+ M E+D I+WN++ISAYAQHG G +A CCF+ MQ S GIKPD+AT+T+VLSACSHAG
Sbjct: 533 VFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAG 592

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAERLI 1
           L+DDGI IF++MV  YGF P VDHFSCIVDLLGR+G+LD AER+I
Sbjct: 593 LVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVI 637


>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49740 gi|6723419|emb|CAB66912.1| putative protein
           [Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 737

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/105 (62%), Positives = 84/105 (80%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           VFN M+EKD++SWNS+ISAY++HGEG  A   ++ MQD   + PD AT++AVLSACSHAG
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAERLI 1
           L+++G+ IFNSMV  +G    VDHFSC+VDLLGRAGHLD AE L+
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV 650


>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321831|gb|EFH52252.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 731

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/105 (60%), Positives = 81/105 (77%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           VF+ M++KD +SWNS+ISAYA+HG+G  A   ++ MQD   + PD AT +AVLSAC HAG
Sbjct: 540 VFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACGHAG 599

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAERLI 1
           L+ +G+ IFNSMV  +G  P VDHFSC+VDLLGRAGHLD AE L+
Sbjct: 600 LVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLV 644



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/102 (28%), Positives = 56/102 (54%)
 Frame = -3

Query: 315 VFNTMNEKDIISWNSMISAYAQHGEGMKAACCFQVMQDSAGIKPDKATYTAVLSACSHAG 136
           VF ++ EKD+I+WN+MIS Y Q   G  A   ++ M    G+KPD+ T+ ++L+    + 
Sbjct: 339 VFESLEEKDLITWNTMISGYNQANLGQSALLLYKRMH-GIGVKPDEFTFGSLLA----SS 393

Query: 135 LIDDGIHIFNSMVNKYGFEPEVDHFSCIVDLLGRAGHLDVAE 10
           L  D + +  + V K+G   +++  + ++    + G +  A+
Sbjct: 394 LDLDALEMVQACVIKFGLSSKIEISNALISAYSKHGKITKAD 435