BLASTX nr result

ID: Bupleurum21_contig00021638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021638
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    97   1e-18
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    95   5e-18
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    94   2e-17
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...    92   3e-17

>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
 Frame = +1

Query: 73  CSVYSLLNEPFCKPVVVVDSPINDPYMCFSIVGSCNGLICVVSGDNKLFLWNPATRKSKQ 252
           C + S+LN+     +  + SP+ +P +   IVGS NGLIC+ S   +  LWNPA +KSK+
Sbjct: 76  CCLPSMLNKERSTELFDIGSPMENPTIYTWIVGSVNGLICLYSKIEETVLWNPAVKKSKK 135

Query: 253 LQ--NSDIENYKCLEIIYGFGYDEFNDDYKVVAIFCSYLKESRTYKMKVKIYSSRLDRWR 426
           L    + + N     + YGFGYDE  DDYKVV I C Y ++S +    V IYS + D WR
Sbjct: 136 LPTLGAKLRNGCSYYLKYGFGYDETRDDYKVVVIQCIY-EDSGSCDSVVNIYSLKADSWR 194

Query: 427 SIEDFPSTIMLNT 465
           +I  F    ++N+
Sbjct: 195 TINKFQGNFLVNS 207


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/146 (36%), Positives = 76/146 (52%)
 Frame = +1

Query: 7   SHFADERLISSSFVLPDEKLRDCSVYSLLNEPFCKPVVVVDSPINDPYMCFSIVGSCNGL 186
           +HF   R+I S+    +  L+ CS+ SL N P       ++ P+ + +    IVGSCNGL
Sbjct: 97  THFTHHRIILSA-TTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGL 155

Query: 187 ICVVSGDNKLFLWNPATRKSKQLQNSDIENYKCLEIIYGFGYDEFNDDYKVVAIFCSYLK 366
           +C     + + LWNP+ R SK+               +G GYD  N+DYKVVA+FC    
Sbjct: 156 LCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCD--P 213

Query: 367 ESRTYKMKVKIYSSRLDRWRSIEDFP 444
                + KVK+YS   + WR I+DFP
Sbjct: 214 SEYFIECKVKVYSMATNSWRKIQDFP 239


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
 Frame = +1

Query: 1   ESSHFADERLISSSFVLPDEKLRDCSVYSLLNEPFCKPVVVVDS---PINDPYMCFSIVG 171
           +++HF     I  S    +  L+ CS+ SL N P      V D    P+ + +    IVG
Sbjct: 54  QNTHFTTNHRIILSATTAEFHLKSCSITSLFNNPS----TVSDDLNYPVKNKFRHDGIVG 109

Query: 172 SCNGLICVVSGDNKLFLWNPATRKSKQLQNSDIENYKCLEIIYGFGYDEFNDDYKVVAIF 351
           SCNGL+C     + + LWNP+ R SK+               +G GYD  NDDYKVVA+F
Sbjct: 110 SCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTCFGLGYDHVNDDYKVVAVF 169

Query: 352 C---SYLKESRTYKMKVKIYSSRLDRWRSIEDFP 444
           C    +  ES     KVK+YS   + WR I DFP
Sbjct: 170 CDPNEFFSES-----KVKVYSMATNTWRKIHDFP 198


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
 Frame = +1

Query: 13  FADERLISSSFVLPDEKLRDCSVYSLLNEPFCKPVVVVDSPINDPYMCFSIVGSCNGLIC 192
           F+ E +ISSS   P  +L+ CS+YS+ N P    VV+    + D Y    +VGSC+GL+C
Sbjct: 133 FSPEIVISSSE--PLFRLKSCSLYSVYNNPVTDAVVIDYYLLKDIYRYDWVVGSCDGLVC 190

Query: 193 VVSGDNKLFLWNPATRKSKQLQNSDIENYKCLEIIYGFGYDEFNDDYKVVAIFCSYLKE- 369
           +    + + LWNP+TR   +L +           ++GFGYD   DDYKV+A+FC   K  
Sbjct: 191 LGIKQDFVVLWNPSTRVFNRLPDLGFAKKLGSYTVFGFGYDSQIDDYKVLAMFCFLTKSV 250

Query: 370 --SRTYKMKVKIYSSRLDRWRSIEDF 441
                Y  ++K+ + + + WR +EDF
Sbjct: 251 YGGSRYVTRIKVCALKGECWRRLEDF 276


>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
 Frame = +1

Query: 133 PINDPYMCFSIVGSCNGLICVVSGDNKLFLWNPATRKSKQLQNSDIENYKCLEIIYGFGY 312
           P+ND      IVGSC+G++C    +    L NP+ RK  QL + DI   +    IYGFGY
Sbjct: 106 PLNDRNRFDVIVGSCHGILCFALDECFALLRNPSIRKFTQLPSLDIPKREGSYTIYGFGY 165

Query: 313 DEFNDDYKVVAIFC----SYLKESRTYKMKVKIYSSRLDRWRSIEDFPSTI 453
           D FND YKVVA+ C    +    S+ YK +VK+Y+   D WR I+DFPS +
Sbjct: 166 DHFNDTYKVVAVNCFESDTDSNGSKVYKTEVKVYTLGTDYWRRIQDFPSGV 216


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