BLASTX nr result

ID: Bupleurum21_contig00021622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021622
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798...    72   5e-11
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_003548348.1| PREDICTED: uncharacterized protein LOC100799...    71   8e-11
ref|XP_002264276.2| PREDICTED: regulator of nonsense transcripts...    71   1e-10

>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/48 (64%), Positives = 42/48 (87%)
 Frame = +1

Query: 169 GTADRTKVVIRHLPPTMSQSMLMDQIDEKFSGRFDFVSFRPGNNSQKH 312
           G +D+TKVV+RHLPP +SQ M ++QID  FSGR++++S+RPGNNSQKH
Sbjct: 5   GQSDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKH 52


>ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798866 [Glycine max]
          Length = 510

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +1

Query: 163 MKGTADRTKVVIRHLPPTMSQSMLMDQIDEKFSGRFDFVSFRPGNNSQKH 312
           MKG  DRTKVV+RHLPP++S++ L+ QID  F+GR++++SFRPG  SQKH
Sbjct: 1   MKGALDRTKVVLRHLPPSISEAALLSQIDAAFAGRYNWLSFRPGKISQKH 50


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/48 (64%), Positives = 41/48 (85%)
 Frame = +1

Query: 169 GTADRTKVVIRHLPPTMSQSMLMDQIDEKFSGRFDFVSFRPGNNSQKH 312
           G A++TKVV+RHLPPT+SQ   ++QID  FSGR+++VSFRPG +SQKH
Sbjct: 4   GQAEKTKVVVRHLPPTISQGSFLEQIDVVFSGRYNWVSFRPGKSSQKH 51


>ref|XP_003548348.1| PREDICTED: uncharacterized protein LOC100799816 [Glycine max]
          Length = 508

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +1

Query: 163 MKGTADRTKVVIRHLPPTMSQSMLMDQIDEKFSGRFDFVSFRPGNNSQKH 312
           MKG  DRTKVV+RHLPP++S++ L+ QID  F+GR++++SFRPG  SQKH
Sbjct: 1   MKGALDRTKVVLRHLPPSISEAALLAQIDAAFAGRYNWLSFRPGKISQKH 50


>ref|XP_002264276.2| PREDICTED: regulator of nonsense transcripts 3B-like [Vitis
           vinifera]
          Length = 256

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +1

Query: 163 MKGTADRTKVVIRHLPPTMSQSMLMDQIDEKFSGRFDFVSFRPGNNSQK 309
           MKG  DRTKVV+RHLPPT+S++  ++QID  F GR+  V FRPG NSQK
Sbjct: 1   MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQK 49


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