BLASTX nr result

ID: Bupleurum21_contig00021620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021620
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003516426.1| PREDICTED: uncharacterized protein LOC100783...    71   1e-10
gb|AFK35843.1| unknown [Medicago truncatula]                           70   1e-10
gb|AFK35441.1| unknown [Medicago truncatula]                           70   1e-10

>ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|222868288|gb|EEF05419.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
 Frame = +3

Query: 108 MLRSSADSFSHENPLFQIKQDDKLFTKLVSKETSIANPSFR---SGVSVAVPFLWETQPG 278
           MLRS+  S  H     ++KQDDK F++L+SKE S+ANPSFR    GVSVAVPF+WE+QPG
Sbjct: 1   MLRSATSSVDHPQKALEMKQDDKFFSRLMSKENSMANPSFRVYYGGVSVAVPFVWESQPG 60

Query: 279 TPKH 290
           TPK+
Sbjct: 61  TPKY 64


>ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|222855153|gb|EEE92700.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
 Frame = +3

Query: 114 RSSADSFSHENPLFQIKQDDKLFTKLVSKETSIANPSFR---SGVSVAVPFLWETQPGTP 284
           RS+           QIKQDDK F++L+S+E+S+ANPSFR    GVSV VPF+WE+QPGTP
Sbjct: 4   RSATPDMDLPQKALQIKQDDKFFSRLLSRESSMANPSFRVYYGGVSVGVPFVWESQPGTP 63

Query: 285 KH 290
           K+
Sbjct: 64  KY 65


>ref|XP_003516426.1| PREDICTED: uncharacterized protein LOC100783232 [Glycine max]
          Length = 178

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/52 (59%), Positives = 43/52 (82%)
 Frame = +3

Query: 150 LFQIKQDDKLFTKLVSKETSIANPSFRSGVSVAVPFLWETQPGTPKHKLFPD 305
           +  IKQDDK F +L+SKE+S+ANPSFR  +++AVPF+WE++PGTPKH+   D
Sbjct: 13  VLSIKQDDKFFCRLLSKESSMANPSFR--IALAVPFVWESEPGTPKHRFSED 62


>gb|AFK35843.1| unknown [Medicago truncatula]
          Length = 190

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = +3

Query: 141 ENPLFQIKQDDKLFTKLVSKETSIANPSFRSGVSVAVPFLWETQPGTPKHKLFPD 305
           E  + QIKQDDK F++L+SKE S  +PSFR  VS+AVPF+WE+QPGTPKH    D
Sbjct: 7   EKSVLQIKQDDKFFSRLLSKENSNIHPSFR--VSLAVPFVWESQPGTPKHTFSND 59


>gb|AFK35441.1| unknown [Medicago truncatula]
          Length = 190

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 120 SADSFSHENPLFQIKQDDKLFTKLVSKETSIANPSFRSGVSVAVPFLWETQPGTPKH 290
           S+ S   +  + QIKQDDK F +L++KE+SI+NPSFR  V+V VPF+WE+QPGTPK+
Sbjct: 3   SSKSEQPQKTILQIKQDDKFFCRLLTKESSISNPSFR--VAVTVPFVWESQPGTPKY 57


Top