BLASTX nr result

ID: Bupleurum21_contig00021566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021566
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]   341   e-110
ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma...   338   e-110
ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...   338   e-109
ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex pr...   334   e-108
ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|2...   329   e-107

>emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]
          Length = 557

 Score =  341 bits (874), Expect(2) = e-110
 Identities = 169/183 (92%), Positives = 179/183 (97%)
 Frame = -1

Query: 745 EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDALAVLEKIAVSIDVND 566
           EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDA+AVL+KIA+SIDV D
Sbjct: 87  EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDAIAVLDKIAMSIDVKD 146

Query: 565 RAAMLGLVKSCIGTKFTSQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKIPGG 386
           R+ +LGLVKSCIGTKFTSQFGDLIADLA+DATTTVGVDLGQGLREVDIKKYIKVEK+PGG
Sbjct: 147 RSTVLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 206

Query: 385 QLEDSKVLKGVMINKDVVVPGKMRRKIINPRIILLDSPIEYKKGENQTNAELVKEEDWGV 206
           QLEDSKVLKGVMINKDV+ PGKMRRKI+NPRIILLD P+EYKKGENQTNAELVKEEDWGV
Sbjct: 207 QLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELVKEEDWGV 266

Query: 205 LLK 197
           LLK
Sbjct: 267 LLK 269



 Score = 84.0 bits (206), Expect(2) = e-110
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = -3

Query: 131 KMEEEYIENLCVQILKFKPDLVITEKGLSDLACHYFSKAGVSA 3
           KMEEEYIE++C+QILKFKPDLVITEKGLSDLACHY SKAGVSA
Sbjct: 269 KMEEEYIESICMQILKFKPDLVITEKGLSDLACHYLSKAGVSA 311


>ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|297733798|emb|CBI15045.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  338 bits (867), Expect(2) = e-110
 Identities = 167/183 (91%), Positives = 177/183 (96%)
 Frame = -1

Query: 745 EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDALAVLEKIAVSIDVND 566
           EEVGDGTTSVIVLAGEMLHVAEAFIDK++HPTVICRAYNKALEDA+AVL+KIA  +DVND
Sbjct: 87  EEVGDGTTSVIVLAGEMLHVAEAFIDKNFHPTVICRAYNKALEDAIAVLDKIAAPVDVND 146

Query: 565 RAAMLGLVKSCIGTKFTSQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKIPGG 386
           R AMLG+VKSCIGTKFT QFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEK+PGG
Sbjct: 147 RVAMLGMVKSCIGTKFTGQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 206

Query: 385 QLEDSKVLKGVMINKDVVVPGKMRRKIINPRIILLDSPIEYKKGENQTNAELVKEEDWGV 206
           QLEDSKVLKGVMINKDVV PGKMRRKIINPRIILLD P+EYKKGENQTNAELV+EEDWG+
Sbjct: 207 QLEDSKVLKGVMINKDVVAPGKMRRKIINPRIILLDCPLEYKKGENQTNAELVREEDWGI 266

Query: 205 LLK 197
           LLK
Sbjct: 267 LLK 269



 Score = 86.7 bits (213), Expect(2) = e-110
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = -3

Query: 131 KMEEEYIENLCVQILKFKPDLVITEKGLSDLACHYFSKAGVSA 3
           KMEEEYIENLC+QILKFKPDLVITEKGLSDLACHY SKAGVSA
Sbjct: 269 KMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSA 311


>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|296084839|emb|CBI27721.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  338 bits (868), Expect(2) = e-109
 Identities = 168/183 (91%), Positives = 178/183 (97%)
 Frame = -1

Query: 745 EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDALAVLEKIAVSIDVND 566
           EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDA+AVL+KIA+SIDV D
Sbjct: 87  EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDAIAVLDKIAMSIDVKD 146

Query: 565 RAAMLGLVKSCIGTKFTSQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKIPGG 386
           R+ +LGLVKSCIGTKFTSQFGDLIADLA+DAT TVGVDLGQGLREVDIKKYIKVEK+PGG
Sbjct: 147 RSTVLGLVKSCIGTKFTSQFGDLIADLAIDATMTVGVDLGQGLREVDIKKYIKVEKVPGG 206

Query: 385 QLEDSKVLKGVMINKDVVVPGKMRRKIINPRIILLDSPIEYKKGENQTNAELVKEEDWGV 206
           QLEDSKVLKGVMINKDV+ PGKMRRKI+NPRIILLD P+EYKKGENQTNAELVKEEDWGV
Sbjct: 207 QLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELVKEEDWGV 266

Query: 205 LLK 197
           LLK
Sbjct: 267 LLK 269



 Score = 84.0 bits (206), Expect(2) = e-109
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = -3

Query: 131 KMEEEYIENLCVQILKFKPDLVITEKGLSDLACHYFSKAGVSA 3
           KMEEEYIE++C+QILKFKPDLVITEKGLSDLACHY SKAGVSA
Sbjct: 269 KMEEEYIESICMQILKFKPDLVITEKGLSDLACHYLSKAGVSA 311


>ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit
           gamma-like [Cucumis sativus]
          Length = 514

 Score =  334 bits (857), Expect(2) = e-108
 Identities = 165/183 (90%), Positives = 176/183 (96%)
 Frame = -1

Query: 745 EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDALAVLEKIAVSIDVND 566
           EEVGDGTTSVIVLAGEMLHVAEAFI+K+YHPTVICRAYNKALEDALAVL+KIA+ IDV D
Sbjct: 46  EEVGDGTTSVIVLAGEMLHVAEAFIEKNYHPTVICRAYNKALEDALAVLDKIAMDIDVKD 105

Query: 565 RAAMLGLVKSCIGTKFTSQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKIPGG 386
           R AMLGLVKSCIGTKFTSQFGDLIADLA+DATT VGVDLGQG+REVDIKKYIKVEK+PGG
Sbjct: 106 RTAMLGLVKSCIGTKFTSQFGDLIADLAIDATTIVGVDLGQGVREVDIKKYIKVEKVPGG 165

Query: 385 QLEDSKVLKGVMINKDVVVPGKMRRKIINPRIILLDSPIEYKKGENQTNAELVKEEDWGV 206
           QLEDSKVLKGVM NKDVV PGKMRRKI+NPRI+LLD P+EYKKGENQTNAELVKEEDWG+
Sbjct: 166 QLEDSKVLKGVMFNKDVVAPGKMRRKIVNPRILLLDCPLEYKKGENQTNAELVKEEDWGI 225

Query: 205 LLK 197
           LLK
Sbjct: 226 LLK 228



 Score = 83.2 bits (204), Expect(2) = e-108
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = -3

Query: 131 KMEEEYIENLCVQILKFKPDLVITEKGLSDLACHYFSKAGVSA 3
           KMEEEYIEN+C QI+KFKPDLVITEKGLSDLACHY S+AG+SA
Sbjct: 228 KMEEEYIENICAQIIKFKPDLVITEKGLSDLACHYLSRAGISA 270


>ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|222848309|gb|EEE85856.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  329 bits (844), Expect(2) = e-107
 Identities = 165/183 (90%), Positives = 175/183 (95%)
 Frame = -1

Query: 745 EEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDALAVLEKIAVSIDVND 566
           EEVGDGTTSVIVL GEMLHVAEAFI+KSYHPTVICRAY+KALEDA+AVL+KIAVSIDVND
Sbjct: 87  EEVGDGTTSVIVLGGEMLHVAEAFIEKSYHPTVICRAYSKALEDAIAVLDKIAVSIDVND 146

Query: 565 RAAMLGLVKSCIGTKFTSQFGDLIADLALDATTTVGVDLGQGLREVDIKKYIKVEKIPGG 386
           R AMLGLVKSCIGTKFTSQFGDLIADLA+DAT+TVGVDLGQGLREVDIKKYIKVEK+PG 
Sbjct: 147 RPAMLGLVKSCIGTKFTSQFGDLIADLAIDATSTVGVDLGQGLREVDIKKYIKVEKVPGS 206

Query: 385 QLEDSKVLKGVMINKDVVVPGKMRRKIINPRIILLDSPIEYKKGENQTNAELVKEEDWGV 206
           QLEDSKVLKGVM NKDVV PGKM+RKI NPRIILLD P+EYKKGENQTNAELV+EEDW V
Sbjct: 207 QLEDSKVLKGVMFNKDVVAPGKMKRKIPNPRIILLDCPVEYKKGENQTNAELVREEDWEV 266

Query: 205 LLK 197
           LLK
Sbjct: 267 LLK 269



 Score = 87.0 bits (214), Expect(2) = e-107
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = -3

Query: 131 KMEEEYIENLCVQILKFKPDLVITEKGLSDLACHYFSKAGVSA 3
           KMEEEYIEN+CVQILKFKPDLVITEKGLSDLACHY SKAGVSA
Sbjct: 269 KMEEEYIENMCVQILKFKPDLVITEKGLSDLACHYLSKAGVSA 311


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