BLASTX nr result

ID: Bupleurum21_contig00021552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021552
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putativ...   414   e-113
ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 ...   403   e-110
ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arab...   401   e-109
ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arab...   401   e-109

>ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putative [Ricinus communis]
           gi|223544963|gb|EEF46478.1| Pyridoxin biosynthesis
           protein PDX1, putative [Ricinus communis]
          Length = 305

 Score =  414 bits (1063), Expect = e-113
 Identities = 200/282 (70%), Positives = 243/282 (86%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   FSMKVGLAQLLRGGAIMEITNPEQAKIAESAGACCIIVTEA-VESGISRMPDPSLIKEIK 177
           +S+KVGLAQ+LRGGAI+E+ NP+QAK+AE AGAC ++VTE  +  GI RMPDPSLIKEIK
Sbjct: 23  YSIKVGLAQMLRGGAILEVINPQQAKLAEEAGACSVMVTELPIRQGIQRMPDPSLIKEIK 82

Query: 178 RVVSIPMMAKTRVGHFVEAQILEALETDYIDESEVLAVADENHFINKHNFRVPFVCGCKD 357
           R VSIP++ + RVGHFVEAQILEA+  DYIDESE+LA+ADE++FINKHNFR PF+CGC+D
Sbjct: 83  RAVSIPVITRARVGHFVEAQILEAINVDYIDESELLALADEDNFINKHNFRTPFICGCRD 142

Query: 358 LGEALRRVREGAAMIRTQGDIHKTGDIAQTVCNVRKVMGDIRVLSNMDDDEVFAFSKKIG 537
           LGEALRRVREGAAMIRTQG++   G++ +TV NVR VM +IR+L+NMD+DE+FAF+KKI 
Sbjct: 143 LGEALRRVREGAAMIRTQGELRGYGNVGETVRNVRNVMKEIRILNNMDEDEMFAFAKKIN 202

Query: 538 APYDIVAQTKQMGRLPVVHFAAGGIVTPADAALMMQLGCDGVCVGQEIFACADPYKKARA 717
           APYD+VAQTKQMGRLPVV FAAGGI TPADAALMMQLGCDG+ VG E+F CADPYK+ RA
Sbjct: 203 APYDLVAQTKQMGRLPVVQFAAGGIATPADAALMMQLGCDGIFVGNEVFHCADPYKRMRA 262

Query: 718 IVQAVRNYSDPRVLAEVSSGLNEAMARSNINENSVEQFGTRS 843
           IVQAVR+Y+DP VL E S GL +AMA  N+ ++ +EQF  R+
Sbjct: 263 IVQAVRHYNDPHVLVESSCGLEDAMADLNLPQDRIEQFCRRT 304


>ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|222846959|gb|EEE84506.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  405 bits (1042), Expect = e-111
 Identities = 199/279 (71%), Positives = 242/279 (86%), Gaps = 1/279 (0%)
 Frame = +1

Query: 1   FSMKVGLAQLLRGGAIMEITNPEQAKIAESAGACCIIVTE-AVESGISRMPDPSLIKEIK 177
           FS+K GLAQ+LRGGAI+E+++ +QAKIAE AGAC I+V+E  +  GI RMPDPSLIKEIK
Sbjct: 23  FSIKAGLAQMLRGGAILEVSSVQQAKIAEEAGACSIMVSEPGLRQGIRRMPDPSLIKEIK 82

Query: 178 RVVSIPMMAKTRVGHFVEAQILEALETDYIDESEVLAVADENHFINKHNFRVPFVCGCKD 357
           R VSIP++A+ RVGHFVEAQILEA+  DYIDESE+LA+ADE++FINKHNFR PF+CGC++
Sbjct: 83  RAVSIPLIARARVGHFVEAQILEAIGVDYIDESELLALADEDNFINKHNFRCPFICGCRN 142

Query: 358 LGEALRRVREGAAMIRTQGDIHKTGDIAQTVCNVRKVMGDIRVLSNMDDDEVFAFSKKIG 537
           LGEALRRVREGAAMIRTQG+I   G++A+TV NVR VM ++RVL+NMD+DEVFAF+KKI 
Sbjct: 143 LGEALRRVREGAAMIRTQGEILGQGNVAETVKNVRNVMKEVRVLNNMDEDEVFAFAKKIA 202

Query: 538 APYDIVAQTKQMGRLPVVHFAAGGIVTPADAALMMQLGCDGVCVGQEIFACADPYKKARA 717
           APYD+VAQ KQMGRLPVV FAAGGIVTPADAALMMQLGCDG+ VG E+F  ADPYK+ R 
Sbjct: 203 APYDLVAQIKQMGRLPVVQFAAGGIVTPADAALMMQLGCDGIFVGSEVFDSADPYKRVRG 262

Query: 718 IVQAVRNYSDPRVLAEVSSGLNEAMARSNINENSVEQFG 834
           IV+AVR+Y+DP VL E S GL ++MA  N++E+ +EQFG
Sbjct: 263 IVEAVRHYNDPHVLVESSCGLEDSMAELNLSEDRIEQFG 301


>ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 [Arabidopsis
           thaliana] gi|45477214|sp|Q9ZNR6.1|PDX12_ARATH RecName:
           Full=Probable pyridoxal biosynthesis protein PDX1.2;
           Short=AtPDX1.2; Short=AtPDX1;3 gi|4103952|gb|AAD01897.1|
           A37 [Arabidopsis thaliana] gi|4103954|gb|AAD01898.1| A37
           [Arabidopsis thaliana] gi|9294451|dbj|BAB02670.1| A37
           protein; ethylene-inducible protein-like [Arabidopsis
           thaliana] gi|27808576|gb|AAO24568.1| At3g16050
           [Arabidopsis thaliana] gi|110736159|dbj|BAF00051.1|
           putative ethylene-inducible protein [Arabidopsis
           thaliana] gi|332642245|gb|AEE75766.1| putative pyridoxal
           biosynthesis protein PDX1.2 [Arabidopsis thaliana]
          Length = 314

 Score =  403 bits (1035), Expect = e-110
 Identities = 195/283 (68%), Positives = 241/283 (85%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   FSMKVGLAQLLRGGAIMEITNPEQAKIAESAGACCIIVTEAVES--GISRMPDPSLIKEI 174
           FS+KVGLAQ+LRGGAI+E+++  QAK+AESAGAC +IV++ V S  G+ RMPDP LIKE+
Sbjct: 31  FSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEV 90

Query: 175 KRVVSIPMMAKTRVGHFVEAQILEALETDYIDESEVLAVADENHFINKHNFRVPFVCGCK 354
           KR VS+P+MA+ RVGHFVEAQILE+L  DYIDESE+++VAD++HFINKHNFR PF+CGC+
Sbjct: 91  KRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHNFRSPFICGCR 150

Query: 355 DLGEALRRVREGAAMIRTQGDIHKTGDIAQTVCNVRKVMGDIRVLSNMDDDEVFAFSKKI 534
           D GEALRR+REGAAMIR QGD+  TG+IA+TV NVR +MG++RVL+NMDDDEVF F+KKI
Sbjct: 151 DTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKI 210

Query: 535 GAPYDIVAQTKQMGRLPVVHFAAGGIVTPADAALMMQLGCDGVCVGQEIFACADPYKKAR 714
            APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGV VG E+F   DP+KK R
Sbjct: 211 SAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLR 270

Query: 715 AIVQAVRNYSDPRVLAEVSSGLNEAMARSNINENSVEQFGTRS 843
           +IVQAV++Y+DP VLAE+SSGL  AM   N+  + ++ FG  S
Sbjct: 271 SIVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFGQGS 313


>ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arabidopsis lyrata subsp.
           lyrata] gi|297330962|gb|EFH61381.1| hypothetical protein
           ARALYDRAFT_479060 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  401 bits (1030), Expect = e-109
 Identities = 195/283 (68%), Positives = 239/283 (84%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   FSMKVGLAQLLRGGAIMEITNPEQAKIAESAGACCIIVTEAVES--GISRMPDPSLIKEI 174
           FS+KVGLAQ+LRGGAI+E+++  QAKIAESAGAC +IV++ V S  G+ RMPDP LIKE+
Sbjct: 26  FSVKVGLAQVLRGGAIVEVSSVNQAKIAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEV 85

Query: 175 KRVVSIPMMAKTRVGHFVEAQILEALETDYIDESEVLAVADENHFINKHNFRVPFVCGCK 354
           KR VS+P+M + RVGHFVEAQILE+L  DYIDESE+++VADE+HFINKHNFR PF+CGC+
Sbjct: 86  KRAVSVPVMGRARVGHFVEAQILESLAVDYIDESEIISVADEDHFINKHNFRSPFICGCR 145

Query: 355 DLGEALRRVREGAAMIRTQGDIHKTGDIAQTVCNVRKVMGDIRVLSNMDDDEVFAFSKKI 534
           D GEALRR+REGAAMIR QGD+  TG+IA+TV NVR +MG++RVL+NMDDDEVF F+KKI
Sbjct: 146 DTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKI 205

Query: 535 GAPYDIVAQTKQMGRLPVVHFAAGGIVTPADAALMMQLGCDGVCVGQEIFACADPYKKAR 714
            APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGV VG E+F   DP+KK R
Sbjct: 206 SAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLR 265

Query: 715 AIVQAVRNYSDPRVLAEVSSGLNEAMARSNINENSVEQFGTRS 843
           +IVQAV++Y+DP VLAE+SSGL  AM   N+  + ++ F   S
Sbjct: 266 SIVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFSQGS 308


>ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arabidopsis lyrata subsp.
           lyrata] gi|297307590|gb|EFH38525.1| hypothetical protein
           ARALYDRAFT_497537 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  401 bits (1030), Expect = e-109
 Identities = 195/283 (68%), Positives = 239/283 (84%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   FSMKVGLAQLLRGGAIMEITNPEQAKIAESAGACCIIVTEAVES--GISRMPDPSLIKEI 174
           FS+KVGLAQ+LRGGAI+E+++  QAKIAESAGAC +IV++ V S  G+ RMPDP LIKE+
Sbjct: 31  FSVKVGLAQVLRGGAIVEVSSVNQAKIAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEV 90

Query: 175 KRVVSIPMMAKTRVGHFVEAQILEALETDYIDESEVLAVADENHFINKHNFRVPFVCGCK 354
           KR VS+P+M + RVGHFVEAQILE+L  DYIDESE+++VADE+HFINKHNFR PF+CGC+
Sbjct: 91  KRAVSVPVMGRARVGHFVEAQILESLAVDYIDESEIISVADEDHFINKHNFRSPFICGCR 150

Query: 355 DLGEALRRVREGAAMIRTQGDIHKTGDIAQTVCNVRKVMGDIRVLSNMDDDEVFAFSKKI 534
           D GEALRR+REGAAMIR QGD+  TG+IA+TV NVR +MG++RVL+NMDDDEVF F+KKI
Sbjct: 151 DTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKI 210

Query: 535 GAPYDIVAQTKQMGRLPVVHFAAGGIVTPADAALMMQLGCDGVCVGQEIFACADPYKKAR 714
            APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGV VG E+F   DP+KK R
Sbjct: 211 SAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLR 270

Query: 715 AIVQAVRNYSDPRVLAEVSSGLNEAMARSNINENSVEQFGTRS 843
           +IVQAV++Y+DP VLAE+SSGL  AM   N+  + ++ F   S
Sbjct: 271 SIVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFSQGS 313


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