BLASTX nr result

ID: Bupleurum21_contig00021525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021525
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188479.3| carbon catabolite repressor protein 4-like 3 [A...   116   2e-24
ref|NP_001189925.1| carbon catabolite repressor protein 4-like 3...   116   2e-24
ref|NP_001078178.1| carbon catabolite repressor protein 4-like 3...   116   2e-24
dbj|BAB01117.1| unnamed protein product [Arabidopsis thaliana]        116   2e-24
ref|XP_002511969.1| conserved hypothetical protein [Ricinus comm...   114   9e-24

>ref|NP_188479.3| carbon catabolite repressor protein 4-like 3 [Arabidopsis thaliana]
           gi|332642584|gb|AEE76105.1| carbon catabolite repressor
           protein 4-like 3 [Arabidopsis thaliana]
          Length = 426

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 575 SMRTRDSSGEPLATSYHSKFLGTVDYLWHTRDLKPTRVMDTVPIDILQKTQGLPCKDLGS 396
           S  TRDS GEPLATSYHSKFLGTVDYLW++  L P RV+DT+PID+L KT+GLPC++LGS
Sbjct: 352 SANTRDSVGEPLATSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGS 411

Query: 395 DHLALVSEFAF 363
           DHLALVSEF F
Sbjct: 412 DHLALVSEFVF 422


>ref|NP_001189925.1| carbon catabolite repressor protein 4-like 3 [Arabidopsis thaliana]
           gi|332642586|gb|AEE76107.1| carbon catabolite repressor
           protein 4-like 3 [Arabidopsis thaliana]
          Length = 449

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 575 SMRTRDSSGEPLATSYHSKFLGTVDYLWHTRDLKPTRVMDTVPIDILQKTQGLPCKDLGS 396
           S  TRDS GEPLATSYHSKFLGTVDYLW++  L P RV+DT+PID+L KT+GLPC++LGS
Sbjct: 375 SANTRDSVGEPLATSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGS 434

Query: 395 DHLALVSEFAF 363
           DHLALVSEF F
Sbjct: 435 DHLALVSEFVF 445


>ref|NP_001078178.1| carbon catabolite repressor protein 4-like 3 [Arabidopsis thaliana]
           gi|215275270|sp|Q9LS39.2|CCR4C_ARATH RecName:
           Full=Carbon catabolite repressor protein 4 homolog 3;
           Short=CCR4 homolog 3 gi|332642585|gb|AEE76106.1| carbon
           catabolite repressor protein 4-like 3 [Arabidopsis
           thaliana]
          Length = 448

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 575 SMRTRDSSGEPLATSYHSKFLGTVDYLWHTRDLKPTRVMDTVPIDILQKTQGLPCKDLGS 396
           S  TRDS GEPLATSYHSKFLGTVDYLW++  L P RV+DT+PID+L KT+GLPC++LGS
Sbjct: 374 SANTRDSVGEPLATSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGS 433

Query: 395 DHLALVSEFAF 363
           DHLALVSEF F
Sbjct: 434 DHLALVSEFVF 444


>dbj|BAB01117.1| unnamed protein product [Arabidopsis thaliana]
          Length = 445

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = -1

Query: 575 SMRTRDSSGEPLATSYHSKFLGTVDYLWHTRDLKPTRVMDTVPIDILQKTQGLPCKDLGS 396
           S  TRDS GEPLATSYHSKFLGTVDYLW++  L P RV+DT+PID+L KT+GLPC++LGS
Sbjct: 371 SANTRDSVGEPLATSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGS 430

Query: 395 DHLALVSEFAF 363
           DHLALVSEF F
Sbjct: 431 DHLALVSEFVF 441


>ref|XP_002511969.1| conserved hypothetical protein [Ricinus communis]
           gi|223549149|gb|EEF50638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  114 bits (286), Expect = 9e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%)
 Frame = -1

Query: 575 SMRTRDSSGEPLATSYHSKFLGTVDYLWHTRDLKPTRVMDTVPIDILQKTQGLPCKDLGS 396
           S RTRDS+GEPLATSYHSKFLGTVDYLW++  + P RV+DT+P DIL++T GLP K LGS
Sbjct: 340 STRTRDSNGEPLATSYHSKFLGTVDYLWYSDGVVPVRVLDTLPFDILRRTGGLPFKKLGS 399

Query: 395 DHLALVSEFAFS 360
           DHLALVSEFAF+
Sbjct: 400 DHLALVSEFAFT 411


Top