BLASTX nr result

ID: Bupleurum21_contig00021518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021518
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195821.1| RHO guanyl-nucleotide exchange factor 7 [Arabid...    86   2e-15
ref|XP_002870946.1| hypothetical protein ARALYDRAFT_486978 [Arab...    85   7e-15
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...    83   2e-14
emb|CBI30469.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]    83   2e-14

>ref|NP_195821.1| RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana]
           gi|7340675|emb|CAB82974.1| putative protein [Arabidopsis
           thaliana] gi|53828569|gb|AAU94394.1| At5g02010
           [Arabidopsis thaliana] gi|55733765|gb|AAV59279.1|
           At5g02010 [Arabidopsis thaliana]
           gi|332003036|gb|AED90419.1| RHO guanyl-nucleotide
           exchange factor 7 [Arabidopsis thaliana]
          Length = 546

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
 Frame = +2

Query: 5   ADGSSSFRKP-QRQE-K*WLSVPT---SGLSENARKQLQHKRDCTNQILKASMAINSVTL 169
           ADGSSSFRK  QRQE K WL VP     GL EN+RKQLQHKRDCTNQILKA+MAINS+TL
Sbjct: 210 ADGSSSFRKSFQRQEDKWWLPVPRVSPGGLQENSRKQLQHKRDCTNQILKAAMAINSITL 269

Query: 170 ANMNTSHSW 196
           A+M    S+
Sbjct: 270 ADMEIPESY 278


>ref|XP_002870946.1| hypothetical protein ARALYDRAFT_486978 [Arabidopsis lyrata subsp.
           lyrata] gi|297316783|gb|EFH47205.1| hypothetical protein
           ARALYDRAFT_486978 [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
 Frame = +2

Query: 8   DGSSSFRKP-QRQE-K*WLSVPT---SGLSENARKQLQHKRDCTNQILKASMAINSVTLA 172
           DGSSSFRK  QRQE K WL VP     GL EN+RKQLQHKRDCTNQILKA+MAINS+TLA
Sbjct: 211 DGSSSFRKSFQRQEDKWWLPVPRVSPGGLQENSRKQLQHKRDCTNQILKAAMAINSITLA 270

Query: 173 NMNTSHSW 196
           +M    S+
Sbjct: 271 DMEIPESY 278


>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
 Frame = +2

Query: 8   DGSSSFRKP-QRQEK*WL----SVPTSGLSENARKQLQHKRDCTNQILKASMAINSVTLA 172
           DGSSSFR+P QRQE+ W      VP  GL EN+RKQLQHKRDCTNQILKA+MAINS  LA
Sbjct: 341 DGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQHKRDCTNQILKAAMAINSTALA 400

Query: 173 NMNTSHSW 196
            M    S+
Sbjct: 401 EMEIPESY 408


>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
          Length = 1231

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
 Frame = +2

Query: 8    DGSSSFRKP-QRQEK*WL----SVPTSGLSENARKQLQHKRDCTNQILKASMAINSVTLA 172
            DGSSSFR+P QRQE+ W      VP  GL EN+RKQLQHKRDCTNQILKA+MAINS  LA
Sbjct: 871  DGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQHKRDCTNQILKAAMAINSTALA 930

Query: 173  NMNTSHSW 196
             M    S+
Sbjct: 931  EMEIPESY 938



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/64 (60%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
 Frame = +2

Query: 2   KADGSSSF--RKPQRQEK*WLSVP---TSGLSENARKQLQHKRDCTNQILKASMAINSVT 166
           KADGSSS       ++EK WL VP    +GLSEN+RK LQ KRD TNQI KA  AINS T
Sbjct: 313 KADGSSSSPGHLHHQEEKCWLPVPHVPPTGLSENSRKHLQQKRDFTNQIRKAVRAINSTT 372

Query: 167 LANM 178
           LA M
Sbjct: 373 LAEM 376


>emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]
          Length = 640

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
 Frame = +2

Query: 8   DGSSSFRKP-QRQEK*WL----SVPTSGLSENARKQLQHKRDCTNQILKASMAINSVTLA 172
           DGSSSFR+P QRQE+ W      VP  GL EN+RKQLQHKRDCTNQILKA+MAINS  LA
Sbjct: 280 DGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQHKRDCTNQILKAAMAINSTALA 339

Query: 173 NMNTSHSW 196
            M    S+
Sbjct: 340 EMEIPESY 347


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