BLASTX nr result

ID: Bupleurum21_contig00021516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021516
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281391.1| PREDICTED: uncharacterized protein LOC100249...   320   3e-85
ref|XP_002281377.1| PREDICTED: uncharacterized protein LOC100249...   308   7e-82
ref|XP_002524403.1| protein binding protein, putative [Ricinus c...   303   4e-80
ref|NP_564945.1| Transmembrane Fragile-X-F-associated protein [A...   302   7e-80
ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256...   299   6e-79

>ref|XP_002281391.1| PREDICTED: uncharacterized protein LOC100249082 isoform 2 [Vitis
           vinifera]
          Length = 466

 Score =  320 bits (819), Expect = 3e-85
 Identities = 154/271 (56%), Positives = 193/271 (71%)
 Frame = +2

Query: 11  QGRVMNWRGVLKSLQAVTTHGXXXXXXXXXXXXXNNDAVPSSWWIVFAPLWIFHVVVARS 190
           Q RVM+WR V  SLQA   HG             ++ AV  SWWI+FAPLW+FH VVAR 
Sbjct: 4   QRRVMSWRRVATSLQAPAAHGLLLTFTLLLVLKLDH-AVSYSWWIIFAPLWLFHAVVARG 62

Query: 191 RFSIPAPLIPYDRYWAPFHAAVATPLLVAFELLLCIYLDGSYDLSLKIAFSPLLALEAVI 370
           RFS+PAP +P+DR+WAPFHA  ATPLLVAFELLLCIYL  SY ++LKI F PLLALEA I
Sbjct: 63  RFSLPAPSMPHDRHWAPFHAVTATPLLVAFELLLCIYLQHSYAVNLKIVFLPLLALEAAI 122

Query: 371 FIDNVRMFKALLPGDEVTVADASTLKALPHLWIAFSMIFFIAATAFTLLKLCDNSDIIFW 550
            IDN+RM KAL+PGD+ +++D +  + LPH W+A SM+FFIAAT FTLLKLC +   + W
Sbjct: 123 LIDNIRMCKALMPGDDESISDEAIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAALGW 182

Query: 551 WEIFLIYGFAQLFAFFTCTNWHNPAIHSHSQFSSTNSHLTLVGYLDSYFGSDISLNEEHQ 730
           W++F+ +G A+ FA   CT W+NPAIH +S    T S   ++ YLD   G  +S +E+  
Sbjct: 183 WDLFINFGIAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDEDQH 242

Query: 731 QSRSRGLQDIGGHIMKVPLIVFQILLFIRLQ 823
           QSR   LQDIGGHIMK+PL+ FQILLF+RL+
Sbjct: 243 QSRLCDLQDIGGHIMKIPLVGFQILLFMRLE 273


>ref|XP_002281377.1| PREDICTED: uncharacterized protein LOC100249082 isoform 1 [Vitis
           vinifera] gi|297737871|emb|CBI27072.3| unnamed protein
           product [Vitis vinifera]
          Length = 465

 Score =  308 bits (790), Expect = 7e-82
 Identities = 151/273 (55%), Positives = 190/273 (69%), Gaps = 6/273 (2%)
 Frame = +2

Query: 23  MNWRGVLKSLQAVTTHGXXXXXXXXXXXXXNNDAVPSSWWIVFAPLWIFHVVVARSRFSI 202
           M+WR V  SLQA   HG             ++ AV  SWWI+FAPLW+FH VVAR RFS+
Sbjct: 1   MSWRRVATSLQAPAAHGLLLTFTLLLVLKLDH-AVSYSWWIIFAPLWLFHAVVARGRFSL 59

Query: 203 PAPLIPYDRYWAPFHAAVATPLLVAFELLLCIYLDGSYDL------SLKIAFSPLLALEA 364
           PAP +P+DR+WAPFHA  ATPLLVAFELLLCIYL  SY +      +LKI F PLLALEA
Sbjct: 60  PAPSMPHDRHWAPFHAVTATPLLVAFELLLCIYLQHSYVIKCIAAVNLKIVFLPLLALEA 119

Query: 365 VIFIDNVRMFKALLPGDEVTVADASTLKALPHLWIAFSMIFFIAATAFTLLKLCDNSDII 544
            I IDN+RM KAL+PGD+ +++D +  + LPH W+A SM+FFIAAT FTLLKLC +   +
Sbjct: 120 AILIDNIRMCKALMPGDDESISDEAIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAAL 179

Query: 545 FWWEIFLIYGFAQLFAFFTCTNWHNPAIHSHSQFSSTNSHLTLVGYLDSYFGSDISLNEE 724
            WW++F+ +G A+ FA   CT W+NPAIH +S    T S   ++ YLD   G  +S +E+
Sbjct: 180 GWWDLFINFGIAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDED 239

Query: 725 HQQSRSRGLQDIGGHIMKVPLIVFQILLFIRLQ 823
             QSR   LQDIGGHIMK+PL+ FQILLF+RL+
Sbjct: 240 QHQSRLCDLQDIGGHIMKIPLVGFQILLFMRLE 272


>ref|XP_002524403.1| protein binding protein, putative [Ricinus communis]
           gi|223536364|gb|EEF38014.1| protein binding protein,
           putative [Ricinus communis]
          Length = 452

 Score =  303 bits (775), Expect = 4e-80
 Identities = 146/269 (54%), Positives = 189/269 (70%), Gaps = 1/269 (0%)
 Frame = +2

Query: 20  VMNWRGVLKSLQAVTTHGXXXXXXXXXXXXXNNDAVPSSWWIVFAPLWIFHVVVARSRFS 199
           +M+WR V KSLQA+  H               + AV  SWW +FAPLW+FH VVAR RFS
Sbjct: 8   IMSWRRVAKSLQALVAHSLLFTFTLLLSLKLEH-AVSYSWWAIFAPLWLFHAVVARGRFS 66

Query: 200 IPAPLIPYDRYWAPFHAAVATPLLVAFELLLCIYLDGSYDLSLKIAFSPLLALEAVIFID 379
           +PAP +P DR+WAP HA +ATPLL+AFELLLCI L+ SY ++LKI F PLLA E  I ID
Sbjct: 67  LPAPSLPNDRHWAPSHAVLATPLLIAFELLLCIRLESSYVVNLKIVFLPLLAFEMAILID 126

Query: 380 NVRMFKALLPGDEVTVADASTLKALPHLWIAFSMIFFIAATAFTLLKLCDNSDIIFWWEI 559
           N+RM +AL+PGDE +++D +  + LPH W+A SM+FFIAAT FTLLKLC +   + WW++
Sbjct: 127 NIRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFIAATIFTLLKLCGDVAALGWWDL 186

Query: 560 FLIYGFAQLFAFFTCTNWHNPAIHSHSQFSSTNSHLTLVGYLDSYFGSDISLNEE-HQQS 736
           F+ YG A+ FAF  CT WHNPAIH +S    ++S +T + Y+D   G  +S +E+ HQ  
Sbjct: 187 FINYGIAECFAFLVCTKWHNPAIHRNSHIVGSSSSMT-ISYIDWNRGLVVSSDEDRHQNG 245

Query: 737 RSRGLQDIGGHIMKVPLIVFQILLFIRLQ 823
           R   LQDIGGH MK+PLI FQI+LF+RL+
Sbjct: 246 RICNLQDIGGHFMKIPLIGFQIILFMRLE 274


>ref|NP_564945.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana]
           gi|13878073|gb|AAK44114.1|AF370299_1 unknown protein
           [Arabidopsis thaliana] gi|17104741|gb|AAL34259.1|
           unknown protein [Arabidopsis thaliana]
           gi|332196722|gb|AEE34843.1| Transmembrane
           Fragile-X-F-associated protein [Arabidopsis thaliana]
          Length = 468

 Score =  302 bits (773), Expect = 7e-80
 Identities = 142/272 (52%), Positives = 189/272 (69%), Gaps = 1/272 (0%)
 Frame = +2

Query: 11  QGRVMNWRGVLKSLQAVTTHGXXXXXXXXXXXXXNNDAVPSSWWIVFAPLWIFHVVVARS 190
           Q RVM+WR V KS QA + H              ++  V  SWW VFAPLW+FH V+AR 
Sbjct: 4   QRRVMSWRRVWKSFQAASAHCLLFSFTLLLALKLDH-VVSHSWWFVFAPLWLFHAVIARG 62

Query: 191 RFSIPAPLIPYDRYWAPFHAAVATPLLVAFELLLCIYLDGSYDLSLKIAFSPLLALEAVI 370
           RFS+PAP +P+DR+WAPFH+ +ATPLLVAFE+LLC++L+  Y + LKI F PLLA E  I
Sbjct: 63  RFSLPAPSMPHDRHWAPFHSVMATPLLVAFEILLCVHLEDKYVVDLKIVFLPLLAFEVAI 122

Query: 371 FIDNVRMFKALLPGDEVTVADASTLKALPHLWIAFSMIFFIAATAFTLLKLCDNSDIIFW 550
            IDNVRM + L+PGDE T++D +  + LPH W++ SM+FFIAAT FTLLKLC +   + W
Sbjct: 123 LIDNVRMCRTLMPGDEETMSDEAIWETLPHFWVSISMVFFIAATTFTLLKLCGDVAALGW 182

Query: 551 WEIFLIYGFAQLFAFFTCTNWHNPAIHSHSQFSSTNSHLTLVGYLDSYFGSDISLNEEHQ 730
           W++F+ +G A+ FAF  CT W N +IH +S     +S   +V YLD   G  ++ ++EHQ
Sbjct: 183 WDLFINFGIAECFAFLVCTKWSNQSIHRYSHIPEPSSSSMVVRYLDWNRGLVVTADDEHQ 242

Query: 731 QS-RSRGLQDIGGHIMKVPLIVFQILLFIRLQ 823
           QS R  GLQDIGGH+MK+P + FQI+LF+RL+
Sbjct: 243 QSNRICGLQDIGGHVMKIPFVTFQIILFMRLE 274


>ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256061 [Vitis vinifera]
           gi|297734166|emb|CBI15413.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  299 bits (765), Expect = 6e-79
 Identities = 144/272 (52%), Positives = 186/272 (68%), Gaps = 5/272 (1%)
 Frame = +2

Query: 23  MNWRGVLKSLQAVTTHGXXXXXXXXXXXXXNNDAVPSSWWIVFAPLWIFHVVVARSRFSI 202
           M+WR V KSLQA+T H              ++  +  SWWI+F PLW+FH VVAR RFS+
Sbjct: 1   MSWRRVAKSLQALTAHSLLLSFTLLLVLKLHH-TISYSWWIIFFPLWLFHAVVARGRFSL 59

Query: 203 PAPLIPYDRYWAPFHAAVATPLLVAFELLLCIYLDGSYD-----LSLKIAFSPLLALEAV 367
           PAPL+P++R+WAP HA VATPLL+AFELLLCIYL+  Y      ++LKI F PLLA E  
Sbjct: 60  PAPLVPHNRHWAPCHAVVATPLLIAFELLLCIYLESIYAYGHAAVNLKIIFLPLLAFEIT 119

Query: 368 IFIDNVRMFKALLPGDEVTVADASTLKALPHLWIAFSMIFFIAATAFTLLKLCDNSDIIF 547
           I +DN RM KAL+PGDE +++D +  + LPH W+A SM+FF+AAT FTLLKLC +   + 
Sbjct: 120 ILVDNFRMCKALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATLFTLLKLCGDIGALG 179

Query: 548 WWEIFLIYGFAQLFAFFTCTNWHNPAIHSHSQFSSTNSHLTLVGYLDSYFGSDISLNEEH 727
           WW++F+ +G A+ FAF  CT W NP IH +S  +   S  T + YLD   G  +S +E+ 
Sbjct: 180 WWDLFINFGIAESFAFLVCTKWSNPVIHRNSHTTEAGSSSTTIRYLDWNSGLVVSTDEDQ 239

Query: 728 QQSRSRGLQDIGGHIMKVPLIVFQILLFIRLQ 823
            Q R  GLQDIGGHIMKVPLI FQ+LL +RL+
Sbjct: 240 HQDRMCGLQDIGGHIMKVPLIGFQVLLCMRLE 271


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