BLASTX nr result

ID: Bupleurum21_contig00021332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021332
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [V...    63   2e-08
emb|CAN64950.1| hypothetical protein VITISV_018382 [Vitis vinifera]    63   2e-08
emb|CAN62180.1| hypothetical protein VITISV_043135 [Vitis vinifera]    62   4e-08
ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002524574.1| auxilin, putative [Ricinus communis] gi|2235...    57   2e-06

>ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [Vitis vinifera]
          Length = 949

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = +3

Query: 9   PRHTSKSER-VFSASNARQKNNDFSP-TNSVQYSQSQNPYRSAPKNPMFSSVDELEQFSM 182
           P   S++E   F ++NAR+K N+FS  TNS QYSQS    R   K+   S +DELE F+M
Sbjct: 393 PTQVSRAETGSFGSNNARKKVNEFSSFTNSSQYSQSPKLTRGTVKSSAVSQIDELEDFAM 452

Query: 183 AKNYNNFNENIDVHSGDDSSTNSAAAS 263
            +  NN + + +   GD+  TNS AA+
Sbjct: 453 GRTQNNVDGHAEGLYGDEFETNSVAAA 479


>emb|CAN64950.1| hypothetical protein VITISV_018382 [Vitis vinifera]
          Length = 977

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = +3

Query: 9   PRHTSKSER-VFSASNARQKNNDFSP-TNSVQYSQSQNPYRSAPKNPMFSSVDELEQFSM 182
           P   S++E   F ++NAR+K N+FS  TNS QYSQS    R   K+   S +DELE F+M
Sbjct: 459 PTQVSRAETGSFGSNNARKKVNEFSSFTNSSQYSQSPKLTRGTVKSSAVSQIDELEDFAM 518

Query: 183 AKNYNNFNENIDVHSGDDSSTNSAAAS 263
            +  NN + + +   GD+  TNS AA+
Sbjct: 519 GRTQNNVDGHAEGLYGDEFETNSVAAA 545


>emb|CAN62180.1| hypothetical protein VITISV_043135 [Vitis vinifera]
          Length = 295

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +3

Query: 3   PIPRHTSKSER-VFSASNARQKNNDFSP-TNSVQYSQSQNPYRSAPKNPMFSSVDELEQF 176
           P P   S++E   F ++NAR+K N+FS   NS QYSQS    R   K+   S +DELE F
Sbjct: 194 PRPTQVSRAETGSFGSNNARKKVNEFSSFANSSQYSQSPKLTRGTMKSSAVSQIDELEDF 253

Query: 177 SMAKNYNNFNENIDVHSGDDSSTNSAAAS 263
           +M +  NN + + +   GD+  TNS AA+
Sbjct: 254 AMGRTRNNVDGHAEGLYGDEFETNSVAAA 282


>ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|222861997|gb|EEE99539.1|
           predicted protein [Populus trichocarpa]
          Length = 941

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
 Frame = +3

Query: 3   PIPRHTSKSE-RVFSASNARQKNNDF-SPTNSVQYSQSQNPYRSAPKNPMFSSVDELEQF 176
           P P   SKSE    S++N+R+K N++ S  NS  YSQ+  P   A +N + S +DELE F
Sbjct: 408 PRPPRISKSEFGSVSSTNSRKKFNEYPSFQNSTSYSQNTRPDH-ASRNSVTSQIDELEDF 466

Query: 177 SMAKNYNNFNENIDVHSGDDS-STNSAAAS 263
              +N NN NE  DV  GDD+  T+S+AAS
Sbjct: 467 VTVRNQNNVNEFADVLPGDDADKTSSSAAS 496


>ref|XP_002524574.1| auxilin, putative [Ricinus communis] gi|223536127|gb|EEF37782.1|
           auxilin, putative [Ricinus communis]
          Length = 983

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   PIPRHTSKSER-VFSASNARQKNNDFSPTNSVQYSQSQNPYRSAPKNPMFSSVDELEQFS 179
           P P   SK++   FS++N+R+K N++S +NS  YSQS    R A ++ + + ++ELE F+
Sbjct: 435 PRPPRISKTDTGSFSSTNSRKKVNEYSFSNSASYSQSPRSAR-AGRSMVPTQIEELEDFA 493

Query: 180 MAKNYNNFNENIDVHSGDDSSTNSAAAS 263
           M +   N +E+ DV  G+D   N+++A+
Sbjct: 494 MGRTPTNASEHADVVYGEDMDANASSAA 521


Top