BLASTX nr result

ID: Bupleurum21_contig00021323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021323
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu...   228   6e-58
ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|2...   225   6e-57
ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|2...   224   9e-57
emb|CBI29262.3| unnamed protein product [Vitis vinifera]              222   5e-56
ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   222   5e-56

>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
           gi|223548632|gb|EEF50123.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 735

 Score =  228 bits (582), Expect = 6e-58
 Identities = 106/179 (59%), Positives = 133/179 (74%)
 Frame = -2

Query: 685 DNDPAPWSSDMYIDQPRSLPYVKELKTAAEVTERKASPSWDYNYEKERWMWVKSPPVSQK 506
           DN+PAPW+SD + D+PR LP + EL+ A +VTER+ SPSWDY+ EK  WMW K PP S+K
Sbjct: 415 DNEPAPWTSDNHGDRPRPLPVIGELENAVDVTERRGSPSWDYDEEKGCWMWKKPPPPSRK 474

Query: 505 HADSQKLEDARRTREARSRAQSSSVRDRLLKEFSCLICRKVIVLPLTTPCAHSFCKSCLL 326
             D    ED ++TR+A+ R Q+  VR++LLKE SC ICRKV+  PLTTPC H+FCK+CL 
Sbjct: 475 WVDGGSGEDGKKTRKAKGRRQNVPVREKLLKELSCQICRKVMTNPLTTPCGHNFCKACLE 534

Query: 325 AAFAGQPCIRQRKFEGWRTLRDQKNIMKCPSCATDIFDFLQNPQVNTELMNVVKSLLHR 149
            AFAGQ   RQR  +G RTLR QKN+MKCPSC  DI ++LQNPQVN ELM V+++L  R
Sbjct: 535 GAFAGQSFTRQRTCQGRRTLRVQKNVMKCPSCTNDIAEYLQNPQVNRELMGVIEALQRR 593


>ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|222846612|gb|EEE84159.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  225 bits (574), Expect = 6e-57
 Identities = 112/178 (62%), Positives = 137/178 (76%), Gaps = 2/178 (1%)
 Frame = -2

Query: 685 DNDPAPWSSDMYIDQPRSLPYVKELKTAAEVTERKASPSWDYNYEKERWMWVKSPPVSQK 506
           DN+PAPW+SD+  D+PR+ P +KELK A ++TERK SPSWDY+ EK  WMW K PPVS+K
Sbjct: 413 DNEPAPWTSDVQGDRPRAHPVIKELKNAIDITERKGSPSWDYDEEKSCWMWKKPPPVSKK 472

Query: 505 H-ADSQKLEDARRTREARSRAQSSSVRDRLLK-EFSCLICRKVIVLPLTTPCAHSFCKSC 332
             ADS   ED++  R  + + Q+ SVR++LLK EFSC ICRKV+V P+TTPCAH+FCK+C
Sbjct: 473 RVADSGDPEDSKVMRTIKRQRQNVSVREKLLKAEFSCQICRKVMVYPITTPCAHNFCKAC 532

Query: 331 LLAAFAGQPCIRQRKFEGWRTLRDQKNIMKCPSCATDIFDFLQNPQVNTELMNVVKSL 158
           L  AFAGQ   RQR  +G RTLR QKN+MKCPSC  DI DFLQNPQVN ELM V++SL
Sbjct: 533 LEGAFAGQSFTRQRG-QGRRTLRVQKNVMKCPSCIIDIADFLQNPQVNRELMGVIESL 589


>ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|222841178|gb|EEE78725.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  224 bits (572), Expect = 9e-57
 Identities = 110/177 (62%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
 Frame = -2

Query: 685 DNDPAPWSSDMYIDQPRSLPYVKELKTAAEVTERKASPSWDYNYEKERWMWVKSPPVSQK 506
           DN+PAPW+SD+  D+PR LP +KELK A ++TERK SPSWDY  EK  WMW K PP S+K
Sbjct: 413 DNEPAPWTSDVQGDRPRPLPVIKELKNAIDITERKGSPSWDYEDEKSCWMWKKPPPASKK 472

Query: 505 H-ADSQKLEDARRTREARSRAQSSSVRDRLLKEFSCLICRKVIVLPLTTPCAHSFCKSCL 329
             ADS   ED +  R  + +  + SVR++LLKEFSC ICRKV+  P+TTPCAH+FCK+CL
Sbjct: 473 RVADSVGPEDGKVIRIIKRQKANISVREKLLKEFSCQICRKVMANPITTPCAHNFCKACL 532

Query: 328 LAAFAGQPCIRQRKFEGWRTLRDQKNIMKCPSCATDIFDFLQNPQVNTELMNVVKSL 158
             AFAGQ   RQR  +G RTLR QKN+MKCPSC  DI DFLQNPQVN ELM V++SL
Sbjct: 533 EGAFAGQSLTRQRG-QGRRTLRAQKNVMKCPSCTIDIADFLQNPQVNRELMGVIESL 588


>emb|CBI29262.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  222 bits (566), Expect = 5e-56
 Identities = 106/179 (59%), Positives = 128/179 (71%)
 Frame = -2

Query: 685 DNDPAPWSSDMYIDQPRSLPYVKELKTAAEVTERKASPSWDYNYEKERWMWVKSPPVSQK 506
           DNDPAPW+SD + D+PR LP +KELK A + +ERK +PSWDY+  + RWMW K PP S+K
Sbjct: 422 DNDPAPWTSDDHGDRPRPLPVIKELKNATDTSERKGTPSWDYDETEGRWMWKKPPPASRK 481

Query: 505 HADSQKLEDARRTREARSRAQSSSVRDRLLKEFSCLICRKVIVLPLTTPCAHSFCKSCLL 326
             D          R+ +   Q  S ++RLL EF CL+CR V+VLPLTTPCAH+FCKSCL 
Sbjct: 482 QGDG----GGTVVRKIQRHKQILSAKERLLNEFRCLMCRNVMVLPLTTPCAHNFCKSCLE 537

Query: 325 AAFAGQPCIRQRKFEGWRTLRDQKNIMKCPSCATDIFDFLQNPQVNTELMNVVKSLLHR 149
            AF+GQ  +RQR  EG RTLR QKN+MKCPSC  DI DFLQNPQVN ELM+V+ SL  R
Sbjct: 538 GAFSGQTFVRQRTCEGRRTLRAQKNVMKCPSCPNDISDFLQNPQVNRELMDVIVSLQRR 596


>ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Vitis
           vinifera]
          Length = 815

 Score =  222 bits (566), Expect = 5e-56
 Identities = 106/179 (59%), Positives = 128/179 (71%)
 Frame = -2

Query: 685 DNDPAPWSSDMYIDQPRSLPYVKELKTAAEVTERKASPSWDYNYEKERWMWVKSPPVSQK 506
           DNDPAPW+SD + D+PR LP +KELK A + +ERK +PSWDY+  + RWMW K PP S+K
Sbjct: 434 DNDPAPWTSDDHGDRPRPLPVIKELKNATDTSERKGTPSWDYDETEGRWMWKKPPPASRK 493

Query: 505 HADSQKLEDARRTREARSRAQSSSVRDRLLKEFSCLICRKVIVLPLTTPCAHSFCKSCLL 326
             D          R+ +   Q  S ++RLL EF CL+CR V+VLPLTTPCAH+FCKSCL 
Sbjct: 494 QGDG----GGTVVRKIQRHKQILSAKERLLNEFRCLMCRNVMVLPLTTPCAHNFCKSCLE 549

Query: 325 AAFAGQPCIRQRKFEGWRTLRDQKNIMKCPSCATDIFDFLQNPQVNTELMNVVKSLLHR 149
            AF+GQ  +RQR  EG RTLR QKN+MKCPSC  DI DFLQNPQVN ELM+V+ SL  R
Sbjct: 550 GAFSGQTFVRQRTCEGRRTLRAQKNVMKCPSCPNDISDFLQNPQVNRELMDVIVSLQRR 608


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