BLASTX nr result

ID: Bupleurum21_contig00021088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021088
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271188.2| PREDICTED: uncharacterized protein LOC100266...   399   e-109
emb|CAN69721.1| hypothetical protein VITISV_014218 [Vitis vinifera]   399   e-109
ref|XP_002303700.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
emb|CBI20541.3| unnamed protein product [Vitis vinifera]              317   3e-84
ref|XP_002299418.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83

>ref|XP_002271188.2| PREDICTED: uncharacterized protein LOC100266793 [Vitis vinifera]
          Length = 722

 Score =  399 bits (1025), Expect = e-109
 Identities = 217/348 (62%), Positives = 254/348 (72%), Gaps = 6/348 (1%)
 Frame = +2

Query: 5    RHVVDQLNMWLNPTHWGNREVETETRPLNIPIHTFGFGADHDPASMHAISDASGGTFSFI 184
            R V++ LN+        NRE   E R   IP+HTFGFG+DHD  +MHAISD SGGTFSFI
Sbjct: 369  RQVLEYLNLLPASICPRNRESGDEGRQAIIPVHTFGFGSDHDSTAMHAISDESGGTFSFI 428

Query: 185  QTDDLVQDAFARCIGGLLSVVAQNVRLNMRSVSSGVHIKSIPSGKYLNEISEQGHEGVID 364
            ++   VQDAFA CIGGLLSVVAQ +RL ++SVS GVHI+SIPSGKYL+EI +QG +GVID
Sbjct: 429  ESVATVQDAFAMCIGGLLSVVAQELRLTVKSVSPGVHIESIPSGKYLSEICDQGQQGVID 488

Query: 365  VGDLYADEEKEFLVYLTVPVFSSTVVDGSFATTSLLDVECSYKDIVSMEMVDVKCRTVEI 544
            VGDLYA+E KEFL+YLTVP  SS   +     T+LLDV CSYKD VS E+V V+C  VEI
Sbjct: 489  VGDLYAEEGKEFLIYLTVPELSSAEGEERVKRTTLLDVMCSYKDSVSKEVVQVECERVEI 548

Query: 545  QRPDVLCPTDLIVSLEVDRQRNRLWVAEGIAEAHDMAEKGKLEGAKALLTNRRSVLLHSA 724
            +RP+VL P D+IV LEVDRQRNRLWVAEGIAEA  MAE G LEGAKA+L +RRS LL SA
Sbjct: 549  RRPEVLSPMDMIVCLEVDRQRNRLWVAEGIAEAQRMAETGNLEGAKAVLAHRRSTLLSSA 608

Query: 725  SAQAGDGLCMWLEAELNEIKDRMFSMETYKHSGRAYVRSGMSSHSWXXXXXXXXXXXXXA 904
            SAQAGDGLC WLE+EL EI+ RM SME Y+ +GRAYV SG+SSHSW              
Sbjct: 609  SAQAGDGLCNWLESELREIRQRMASMELYEQTGRAYVLSGLSSHSWQRATTRGDSTTQIT 668

Query: 905  MQ----GDSSNNTGQFGYDTPSMVSMVSKSQ--NLSFKNRGERLYKSC 1030
            +     GDSS  +G  GY+TPSMVSMV+KSQ  NL+   +  RL KSC
Sbjct: 669  LLSRECGDSS-TSGVIGYETPSMVSMVTKSQTLNLTPAQQSRRLNKSC 715


>emb|CAN69721.1| hypothetical protein VITISV_014218 [Vitis vinifera]
          Length = 686

 Score =  399 bits (1025), Expect = e-109
 Identities = 217/348 (62%), Positives = 254/348 (72%), Gaps = 6/348 (1%)
 Frame = +2

Query: 5    RHVVDQLNMWLNPTHWGNREVETETRPLNIPIHTFGFGADHDPASMHAISDASGGTFSFI 184
            R V++ LN+        NRE   E R   IP+HTFGFG+DHD  +MHAISD SGGTFSFI
Sbjct: 333  RQVLEYLNLLPASICPRNRESGDEGRQAIIPVHTFGFGSDHDSTAMHAISDESGGTFSFI 392

Query: 185  QTDDLVQDAFARCIGGLLSVVAQNVRLNMRSVSSGVHIKSIPSGKYLNEISEQGHEGVID 364
            ++   VQDAFA CIGGLLSVVAQ +RL ++SVS GVHI+SIPSGKYL+EI +QG +GVID
Sbjct: 393  ESVAXVQDAFAMCIGGLLSVVAQELRLTVKSVSPGVHIESIPSGKYLSEICDQGQQGVID 452

Query: 365  VGDLYADEEKEFLVYLTVPVFSSTVVDGSFATTSLLDVECSYKDIVSMEMVDVKCRTVEI 544
            VGDLYA+E KEFL+YLTVP  SS   +     T+LLDV CSYKD VS E+V V+C  VEI
Sbjct: 453  VGDLYAEEGKEFLIYLTVPELSSAEGEERVKRTTLLDVMCSYKDSVSKEVVQVECERVEI 512

Query: 545  QRPDVLCPTDLIVSLEVDRQRNRLWVAEGIAEAHDMAEKGKLEGAKALLTNRRSVLLHSA 724
            +RP+VL P D+IV LEVDRQRNRLWVAEGIAEA  MAE G LEGAKA+L +RRS LL SA
Sbjct: 513  RRPEVLSPMDMIVCLEVDRQRNRLWVAEGIAEAQRMAETGNLEGAKAVLAHRRSTLLSSA 572

Query: 725  SAQAGDGLCMWLEAELNEIKDRMFSMETYKHSGRAYVRSGMSSHSWXXXXXXXXXXXXXA 904
            SAQAGDGLC WLE+EL EI+ RM SME Y+ +GRAYV SG+SSHSW              
Sbjct: 573  SAQAGDGLCNWLESELREIRQRMASMELYEQTGRAYVLSGLSSHSWQRATTRGDSTTQIT 632

Query: 905  MQ----GDSSNNTGQFGYDTPSMVSMVSKSQ--NLSFKNRGERLYKSC 1030
            +     GDSS  +G  GY+TPSMVSMV+KSQ  NL+   +  RL KSC
Sbjct: 633  LLSRECGDSS-TSGVIGYETPSMVSMVTKSQTLNLTPAQQSRRLNKSC 679


>ref|XP_002303700.1| predicted protein [Populus trichocarpa] gi|222841132|gb|EEE78679.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  318 bits (815), Expect = 2e-84
 Identities = 167/310 (53%), Positives = 223/310 (71%)
 Frame = +2

Query: 65   VETETRPLNIPIHTFGFGADHDPASMHAISDASGGTFSFIQTDDLVQDAFARCIGGLLSV 244
            ++ E++    P++TFGFG+DHD A+MHAISDAS GTFSFI++ +++QDAFARCIGGL+S+
Sbjct: 278  LKEESKQPTFPVYTFGFGSDHDSAAMHAISDASRGTFSFIESINILQDAFARCIGGLISI 337

Query: 245  VAQNVRLNMRSVSSGVHIKSIPSGKYLNEISEQGHEGVIDVGDLYADEEKEFLVYLTVPV 424
            VA++V+L +RS S GV I S PSG++ N+I +QGH+ VID+GDLYA+EEKEFLV+L++PV
Sbjct: 338  VARDVQLKVRSASPGVQILSTPSGRHKNKIFDQGHQAVIDIGDLYAEEEKEFLVFLSIPV 397

Query: 425  FSSTVVDGSFATTSLLDVECSYKDIVSMEMVDVKCRTVEIQRPDVLCPTDLIVSLEVDRQ 604
             S+   +     TSL++V C +K  VS++ V V+   VEI+RP  L P D ++ LEVDRQ
Sbjct: 398  SSAVDGEERLENTSLVEVSCFHKGSVSVDTVQVEGERVEIRRPPTLSPIDRVLCLEVDRQ 457

Query: 605  RNRLWVAEGIAEAHDMAEKGKLEGAKALLTNRRSVLLHSASAQAGDGLCMWLEAELNEIK 784
            RNRL V E IA+   MAE G L+GA+ALL  + S LL +AS+QAGD LC  LEAEL E +
Sbjct: 458  RNRLLVTETIAKTQRMAEMGDLKGAQALLAKQLSTLLTTASSQAGDDLCNQLEAELKETR 517

Query: 785  DRMFSMETYKHSGRAYVRSGMSSHSWXXXXXXXXXXXXXAMQGDSSNNTGQFGYDTPSMV 964
            +RM + E Y+ SGRAYV SGMSSHSW             + QG +S+ +    Y+TPSM 
Sbjct: 518  ERMETRELYERSGRAYVLSGMSSHSWQRAATRGHSTTILS-QGGNSDTSFTTSYETPSMT 576

Query: 965  SMVSKSQNLS 994
            SMV KSQ L+
Sbjct: 577  SMVLKSQILN 586


>emb|CBI20541.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  317 bits (813), Expect = 3e-84
 Identities = 167/257 (64%), Positives = 190/257 (73%)
 Frame = +2

Query: 92   IPIHTFGFGADHDPASMHAISDASGGTFSFIQTDDLVQDAFARCIGGLLSVVAQNVRLNM 271
            IP+HTFGFG+DHD  +MHAISD SGGTFSFI++   VQDAFA CIGGLLSVVAQ +RL +
Sbjct: 342  IPVHTFGFGSDHDSTAMHAISDESGGTFSFIESVATVQDAFAMCIGGLLSVVAQELRLTV 401

Query: 272  RSVSSGVHIKSIPSGKYLNEISEQGHEGVIDVGDLYADEEKEFLVYLTVPVFSSTVVDGS 451
            +SVS GVHI+SIPSGKYL+EI +QG +GVIDVGDLYA+E KEFL+YLTVP  SS   +  
Sbjct: 402  KSVSPGVHIESIPSGKYLSEICDQGQQGVIDVGDLYAEEGKEFLIYLTVPELSSAEGEER 461

Query: 452  FATTSLLDVECSYKDIVSMEMVDVKCRTVEIQRPDVLCPTDLIVSLEVDRQRNRLWVAEG 631
               T+LLDV CSYKD VS                            EVDRQRNRLWVAEG
Sbjct: 462  VKRTTLLDVMCSYKDSVSK---------------------------EVDRQRNRLWVAEG 494

Query: 632  IAEAHDMAEKGKLEGAKALLTNRRSVLLHSASAQAGDGLCMWLEAELNEIKDRMFSMETY 811
            IAEA  MAE G LEGAKA+L +RRS LL SASAQAGDGLC WLE+EL EI+ RM SME Y
Sbjct: 495  IAEAQRMAETGNLEGAKAVLAHRRSTLLSSASAQAGDGLCNWLESELREIRQRMASMELY 554

Query: 812  KHSGRAYVRSGMSSHSW 862
            + +GRAYV SG+SSHSW
Sbjct: 555  EQTGRAYVLSGLSSHSW 571


>ref|XP_002299418.1| predicted protein [Populus trichocarpa] gi|222846676|gb|EEE84223.1|
            predicted protein [Populus trichocarpa]
          Length = 595

 Score =  315 bits (807), Expect = 1e-83
 Identities = 169/307 (55%), Positives = 212/307 (69%)
 Frame = +2

Query: 74   ETRPLNIPIHTFGFGADHDPASMHAISDASGGTFSFIQTDDLVQDAFARCIGGLLSVVAQ 253
            E+R    PIHTFGFG DHD A+MHAISD SGGTFSFI++ D++QDAFARCIGGL S+VA+
Sbjct: 289  ESRQPTFPIHTFGFGLDHDSAAMHAISDVSGGTFSFIESIDILQDAFARCIGGLTSIVAR 348

Query: 254  NVRLNMRSVSSGVHIKSIPSGKYLNEISEQGHEGVIDVGDLYADEEKEFLVYLTVPVFSS 433
            +V+L +RS S GV I S PSG++ N+I +QGH+  ID+GDLYA+EEKEFLV+L++PVF +
Sbjct: 349  DVQLKVRSASPGVQILSTPSGRHKNKIFDQGHQATIDIGDLYAEEEKEFLVFLSIPVFPA 408

Query: 434  TVVDGSFATTSLLDVECSYKDIVSMEMVDVKCRTVEIQRPDVLCPTDLIVSLEVDRQRNR 613
               +       L+DV    KD VS + V+V+   VEI+RP  L  TD +  LEVDRQRNR
Sbjct: 409  VDGEEMLENMPLVDVSGFQKDSVSTDTVEVEGERVEIRRPQFLSSTDWVPCLEVDRQRNR 468

Query: 614  LWVAEGIAEAHDMAEKGKLEGAKALLTNRRSVLLHSASAQAGDGLCMWLEAELNEIKDRM 793
            L V E IA+   MAE G L+GA+ALL  + S LL +ASAQAGD LC  LEAEL E + RM
Sbjct: 469  LLVTETIAKTQRMAEMGDLKGAQALLAEQLSTLLSTASAQAGDDLCNQLEAELKETRKRM 528

Query: 794  FSMETYKHSGRAYVRSGMSSHSWXXXXXXXXXXXXXAMQGDSSNNTGQFGYDTPSMVSMV 973
             + E Y+ SGRAYV SGMSSHSW             +  G+S        Y+TPSM +MV
Sbjct: 529  ETRELYERSGRAYVLSGMSSHSW-QRAATRGPSMPISSGGNSDMRRTTTSYETPSMTTMV 587

Query: 974  SKSQNLS 994
            +KSQNL+
Sbjct: 588  TKSQNLN 594


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