BLASTX nr result

ID: Bupleurum21_contig00021081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021081
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   130   8e-29
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni...   130   8e-29
ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   130   8e-29
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   130   1e-28
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              130   1e-28

>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -2

Query: 478 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 299
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60



 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -1

Query: 176 DLFEELSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQNLTGRFYAGRPIIV 3
           DLFEELSKYG+LESLNICDNLADHMVGNVY QFREEE AA A+ NL GRFYAGRPIIV
Sbjct: 84  DLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIV 141


>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -2

Query: 478 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 299
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60



 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -1

Query: 176 DLFEELSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQNLTGRFYAGRPIIV 3
           DLFEELSKYG+LESLNICDNLADHMVGNVY QFREEE AA A+ NL GRFYAGRPIIV
Sbjct: 84  DLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIV 141


>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
           splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 326

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -2

Query: 478 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 299
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60



 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/58 (82%), Positives = 55/58 (94%)
 Frame = -1

Query: 176 DLFEELSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQNLTGRFYAGRPIIV 3
           DLF+EL+KYGE+ESLN+CDNLADHMVGNVY QFREEE AA A++NL+GRFYAGRPIIV
Sbjct: 84  DLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIV 141


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/60 (98%), Positives = 60/60 (100%)
 Frame = -2

Query: 478 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 299
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60



 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -1

Query: 176 DLFEELSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQNLTGRFYAGRPIIV 3
           DLFEELSKYGE+ESLNICDNLADHMVGNVY QFREEEHAA A++NL GRFYAGRPIIV
Sbjct: 84  DLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/60 (98%), Positives = 60/60 (100%)
 Frame = -2

Query: 478 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 299
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60



 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -1

Query: 176 DLFEELSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQNLTGRFYAGRPIIV 3
           DLFEELSKYGE+ESLNICDNLADHMVGNVY QFREEEHAA A++NL GRFYAGRPIIV
Sbjct: 84  DLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141


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