BLASTX nr result

ID: Bupleurum21_contig00021000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021000
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]   119   4e-25
ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|35548...   119   4e-25
ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...   111   1e-22
ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|1...   104   1e-20
ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203...   103   2e-20

>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score =  119 bits (298), Expect = 4e-25
 Identities = 75/158 (47%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
 Frame = -2

Query: 597 SRKISSAPCSRSNSAGEXXXXXXXXXXXXXGVHIGRNSPVWQSRRVSVGAGRSGSDTATR 418
           +RK++SAPCSRSNSAGE             GVH+GRNSPVWQ RR     G   SD  T+
Sbjct: 189 TRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR----GGGKNSDQQTQ 244

Query: 417 ---NAGKGVINDANVTRRSKPVTGAGGAKAKVLNVNVPTCIGYRSHLSCRSDEIEXXXXX 247
              N  K +  +A V+RRSK V+G GG KAKVL++NVP CIGYR HLSCRSDE       
Sbjct: 245 QGSNTDKELKKEATVSRRSKVVSG-GGGKAKVLSLNVPMCIGYRHHLSCRSDENSAIGVS 303

Query: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXNLFNLRGLFTKK 133
                                     NLFNLR LFTKK
Sbjct: 304 GGVAVNRGGGDGGGGECHHHDEGSGGNLFNLRNLFTKK 341


>ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|355483198|gb|AES64401.1|
           Cytochrome b6 [Medicago truncatula]
          Length = 385

 Score =  119 bits (298), Expect = 4e-25
 Identities = 75/158 (47%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
 Frame = -2

Query: 597 SRKISSAPCSRSNSAGEXXXXXXXXXXXXXGVHIGRNSPVWQSRRVSVGAGRSGSDTATR 418
           +RK++SAPCSRSNSAGE             GVH+GRNSPVWQ RR     G   SD  T+
Sbjct: 189 TRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR----GGGKNSDQQTQ 244

Query: 417 ---NAGKGVINDANVTRRSKPVTGAGGAKAKVLNVNVPTCIGYRSHLSCRSDEIEXXXXX 247
              N  K +  +A V+RRSK V+G GG KAKVL++NVP CIGYR HLSCRSDE       
Sbjct: 245 QGSNTDKELKKEATVSRRSKVVSG-GGGKAKVLSLNVPMCIGYRHHLSCRSDENSAIGVS 303

Query: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXNLFNLRGLFTKK 133
                                     NLFNLR LFTKK
Sbjct: 304 GGVAVNRGGGDGGGGECHHHDEGSGGNLFNLRNLFTKK 341


>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score =  111 bits (277), Expect = 1e-22
 Identities = 72/162 (44%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
 Frame = -2

Query: 597 SRKISSAPCSRSNSAGEXXXXXXXXXXXXXGVHIGRNSPVWQSRRVSVGAGRSGSDTATR 418
           +RK+SSAPCSRSNSAGE             GVH+GR+SPVWQ RR   G+     +   R
Sbjct: 181 TRKVSSAPCSRSNSAGESKSRKWPSSPGRPGVHLGRSSPVWQVRR--GGSASKSLEPLVR 238

Query: 417 NAGKGVINDANVTRRSK---PVTGAGGAKAKVLNVNVPTCIGYRSHLSCRSDEIE--XXX 253
           NA KG   + +  RR++   P   AG  KA+VLN+NVP CIGYR HLSCRSDE       
Sbjct: 239 NAEKGSKKEGSENRRNRTPAPAPPAGIPKARVLNLNVPMCIGYRHHLSCRSDENSTIGTS 298

Query: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFNLRGLFTKKVY 127
                                       NLFNLR LFTKKVY
Sbjct: 299 HTIGSRGGGAGASMGNGGGGSGNVGSASNLFNLRSLFTKKVY 340


>ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|118484607|gb|ABK94177.1|
           unknown [Populus trichocarpa]
           gi|222873786|gb|EEF10917.1| predicted protein [Populus
           trichocarpa]
          Length = 358

 Score =  104 bits (259), Expect = 1e-20
 Identities = 68/164 (41%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
 Frame = -2

Query: 597 SRKISSAPCSRSNSAGEXXXXXXXXXXXXXG-VHIGRNSPVWQSRRVSVGAGRSGSDTAT 421
           +RK+SSAPCSRSNSAGE               VH+GR+SPVWQ+RR      +S    A 
Sbjct: 195 TRKVSSAPCSRSNSAGESKSRKSWPSSPSRPGVHVGRSSPVWQARRGGSSGMKSSFPEAV 254

Query: 420 RNAGKGVINDANVTR--RSKPV-TGAGGAKAKVLNVNVPTCIGYRSHLSCRSDE---IEX 259
             +G+ + +   VT   R K + +G G  +AKVLN+NVP CIGYR+HLSCRSDE   I  
Sbjct: 255 VRSGEKLSSKKEVTEPGRGKNIASGNGSTRAKVLNINVPVCIGYRNHLSCRSDENSAIGA 314

Query: 258 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFNLRGLFTKKVY 127
                                         NLFN R LF+KKVY
Sbjct: 315 RGSGGGKNVAGGSTDGSSATNSTINVGNGGNLFNFRSLFSKKVY 358


>ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203369 [Cucumis sativus]
           gi|449518021|ref|XP_004166042.1| PREDICTED:
           uncharacterized protein LOC101223271 [Cucumis sativus]
          Length = 332

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
 Frame = -2

Query: 597 SRKISSAPCSRSNSAGEXXXXXXXXXXXXXGVHIGRNSPVWQSRRVSVGAGRSGSDTATR 418
           SRK++SAPCSRSNSAGE             GVH+GR+SPVWQ RR   G+     +T +R
Sbjct: 165 SRKVNSAPCSRSNSAGESKSRKWPSSPSRGGVHLGRSSPVWQVRR--GGSVPKTPETFSR 222

Query: 417 NAGKGVINDANVTRRSKPVTGAGGAKA---KVLNVNVPTCIGYRSHLSCRSDE 268
           NA K    + +   RSK  T A  + A   +VLN+NVP CIGYR+HLSCRSDE
Sbjct: 223 NADKPARKEPSEVHRSKAATAAASSSASRVRVLNLNVPMCIGYRNHLSCRSDE 275


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