BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020997
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   108   6e-22
gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]   107   1e-21
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...   107   1e-21
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   102   3e-20
ref|XP_002874852.1| hypothetical protein ARALYDRAFT_911821 [Arab...   102   4e-20

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/84 (59%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +3

Query: 252 NWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWRVIDMESLIEFATAG-A 428
           NW +LP ++TS+IL RLG I+ILENAQKVC +WRR+CKDP+MWR IDM++L +    G  
Sbjct: 346 NWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDNLGDLGAMGYD 405

Query: 429 LEKMCMNAIDRSQGQLVDLNIEHF 500
           LE MC +A+DRSQG LV+++I +F
Sbjct: 406 LEIMCRHAVDRSQGGLVEIDIWYF 429



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
 Frame = +3

Query: 252 NWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWR--VIDMESLIEFATAG 425
           NW +LP ++TS+IL RLGV+EILENAQKVC +WRR+CKDP+MWR  VID     +     
Sbjct: 8   NWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKYD 67

Query: 426 ALEKMCMNAIDRSQGQLVDLNIEHF 500
            L+ MC +A+DRSQG L++++IE+F
Sbjct: 68  -LDSMCRHAVDRSQGGLLEIDIEYF 91


>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +3

Query: 249 TNWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWRVIDMESLIEFATAG- 425
           TNW +LP ++TS IL RLG IEILENAQKVC +WRR+CKDP+MWR IDM +L +      
Sbjct: 17  TNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDY 76

Query: 426 ALEKMCMNAIDRSQGQLVDLNIEHF 500
            LE MC +A+DRSQG LVD+ I +F
Sbjct: 77  NLEIMCRHAVDRSQGGLVDIGIWYF 101


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +3

Query: 249 TNWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWRVIDMESLIEFATAG- 425
           TNW +LP ++TS IL RLG IEILENAQKVC +WRR+CKDP+MWR IDM +L +      
Sbjct: 17  TNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDY 76

Query: 426 ALEKMCMNAIDRSQGQLVDLNIEHF 500
            LE MC +A+DRSQG LVD+ I +F
Sbjct: 77  NLEIMCRHAVDRSQGGLVDIGIWYF 101


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
 Frame = +3

Query: 252 NWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWRVIDMESL-----IEFA 416
           NW +LP ++TS IL RLG IEILENAQKVC +WRR+CKDP+MWR IDM +L     +EF 
Sbjct: 17  NWTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLEDMEF- 75

Query: 417 TAGALEKMCMNAIDRSQGQLVDLNIEHF 500
               L+ MC +A+DRSQG LV+++I +F
Sbjct: 76  ---NLDIMCRHAVDRSQGGLVEIDIWYF 100


>ref|XP_002874852.1| hypothetical protein ARALYDRAFT_911821 [Arabidopsis lyrata subsp.
           lyrata] gi|297320689|gb|EFH51111.1| hypothetical protein
           ARALYDRAFT_911821 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = +3

Query: 252 NWLDLPDDVTSNILKRLGVIEILENAQKVCTAWRRICKDPAMWRVIDMESLIEFATAGAL 431
           NW +LP D+TS+IL RL VIEILENAQKVC  WRR+CKDP MWR IDM +         +
Sbjct: 8   NWAELPSDLTSSILLRLSVIEILENAQKVCRLWRRVCKDPWMWRRIDMRNPKNLGGMIDM 67

Query: 432 EKMCMNAIDRSQGQLVDLNIEHF 500
           E +C +A+DRSQG LV+++I +F
Sbjct: 68  EIICRHAVDRSQGGLVEIDIGYF 90