BLASTX nr result

ID: Bupleurum21_contig00020982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020982
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48013.1| unknown [Lotus japonicus]                              143   7e-36
gb|AFK35931.1| unknown [Lotus japonicus]                              143   2e-35
ref|XP_002336006.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-34
ref|NP_001237875.1| uncharacterized protein LOC100306121 [Glycin...   130   2e-32
ref|XP_003634407.1| PREDICTED: thylakoidal processing peptidase ...   125   2e-31

>gb|AFK48013.1| unknown [Lotus japonicus]
          Length = 193

 Score =  143 bits (360), Expect(2) = 7e-36
 Identities = 62/98 (63%), Positives = 78/98 (79%)
 Frame = +3

Query: 72  TKQPGFRKGEILIKRIVARAGDWVEVHDGQLYVNGLAKKEDYLMEKPIYETHSTYVPKGH 251
           T+  G     + IKR+VA+ GD VEVH G+LY+NG+A++ED++ E+P Y   STYVPKGH
Sbjct: 96  TQLSGDNPDVVFIKRVVAKEGDTVEVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGH 155

Query: 252 VYVLGDNRNNSCDSHVWGPLPTRNIVGRYTMCFYRPVS 365
           VYVLGDNRNNS DSHVWGPLP +NI+GRY MCF+RP +
Sbjct: 156 VYVLGDNRNNSYDSHVWGPLPVKNIIGRYVMCFHRPTN 193



 Score = 34.3 bits (77), Expect(2) = 7e-36
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   ASYFIRRPALHDVVTFRAPLDVS 69
           ASY+ R PA+H++VTFR P  +S
Sbjct: 77  ASYYFRSPAIHEIVTFRDPTQLS 99


>gb|AFK35931.1| unknown [Lotus japonicus]
          Length = 193

 Score =  143 bits (360), Expect(2) = 2e-35
 Identities = 62/98 (63%), Positives = 78/98 (79%)
 Frame = +3

Query: 72  TKQPGFRKGEILIKRIVARAGDWVEVHDGQLYVNGLAKKEDYLMEKPIYETHSTYVPKGH 251
           T+  G     + IKR+VA+ GD VEVH G+LY+NG+A++ED++ E+P Y   STYVPKGH
Sbjct: 96  TQLSGDNPDVVFIKRVVAKEGDTVEVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGH 155

Query: 252 VYVLGDNRNNSCDSHVWGPLPTRNIVGRYTMCFYRPVS 365
           VYVLGDNRNNS DSHVWGPLP +NI+GRY MCF+RP +
Sbjct: 156 VYVLGDNRNNSYDSHVWGPLPVKNIIGRYVMCFHRPTN 193



 Score = 32.7 bits (73), Expect(2) = 2e-35
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 1   ASYFIRRPALHDVVTFRAPLDVS 69
           ASY+ R P +H++VTFR P  +S
Sbjct: 77  ASYYFRSPTIHEIVTFRDPTQLS 99


>ref|XP_002336006.1| predicted protein [Populus trichocarpa] gi|222838438|gb|EEE76803.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  139 bits (350), Expect(2) = 2e-34
 Identities = 60/95 (63%), Positives = 77/95 (81%)
 Frame = +3

Query: 75  KQPGFRKGEILIKRIVARAGDWVEVHDGQLYVNGLAKKEDYLMEKPIYETHSTYVPKGHV 254
           KQ G    ++ IKR+VA+AGD V+VH G LYVNG+A+ ED+L+E+P Y ++ TYVP+GHV
Sbjct: 35  KQLGITGEDVFIKRVVAKAGDLVQVHHGSLYVNGIAQTEDFLVEQPAYTSNLTYVPEGHV 94

Query: 255 YVLGDNRNNSCDSHVWGPLPTRNIVGRYTMCFYRP 359
           YVLGDNRNNS DSHVWGPLP +N++GR+  C YRP
Sbjct: 95  YVLGDNRNNSYDSHVWGPLPIKNVIGRFVTCCYRP 129



 Score = 33.1 bits (74), Expect(2) = 2e-34
 Identities = 12/24 (50%), Positives = 20/24 (83%)
 Frame = +1

Query: 1  ASYFIRRPALHDVVTFRAPLDVSL 72
          ASY+++ PA++D+VTFRAP  + +
Sbjct: 16 ASYYLKVPAINDIVTFRAPKQLGI 39


>ref|NP_001237875.1| uncharacterized protein LOC100306121 [Glycine max]
           gi|255627617|gb|ACU14153.1| unknown [Glycine max]
          Length = 194

 Score =  130 bits (328), Expect(2) = 2e-32
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +3

Query: 72  TKQPGFRKGEILIKRIVARAGDWVEVHDGQLYVNGLAKKEDYLMEKPIYETHSTYVPKGH 251
           T+  G     + IKRIVA+AGD VEV+ G LY+NG+A++ED++ E P Y     +VP GH
Sbjct: 96  TQSSGENTDAVFIKRIVAKAGDTVEVNHGALYINGVAQQEDFIAEPPAYAMQLAHVPNGH 155

Query: 252 VYVLGDNRNNSCDSHVWGPLPTRNIVGRYTMCFYRP 359
           VYVLGDNRNNS DSHVWGPLP +NIVGRY  C++RP
Sbjct: 156 VYVLGDNRNNSYDSHVWGPLPVKNIVGRYVTCYHRP 191



 Score = 35.0 bits (79), Expect(2) = 2e-32
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   ASYFIRRPALHDVVTFRAPLDVS 69
           ASY+IR PA+HD+VTF+ P   S
Sbjct: 77  ASYYIRSPAIHDIVTFKDPTQSS 99


>ref|XP_003634407.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Vitis vinifera]
          Length = 194

 Score =  125 bits (314), Expect(2) = 2e-31
 Identities = 58/92 (63%), Positives = 69/92 (75%)
 Frame = +3

Query: 81  PGFRKGEILIKRIVARAGDWVEVHDGQLYVNGLAKKEDYLMEKPIYETHSTYVPKGHVYV 260
           PG  + EI IKR+VARAGD VEV DG LYVNG  + ED+++E+P Y    TYVPK HV+V
Sbjct: 99  PGHSEDEIFIKRVVARAGDLVEVRDGSLYVNGDVQTEDFILEQPNYILDLTYVPKDHVFV 158

Query: 261 LGDNRNNSCDSHVWGPLPTRNIVGRYTMCFYR 356
           LGDNRNNS DSH WGPLP +NI+GR+    YR
Sbjct: 159 LGDNRNNSSDSHEWGPLPIKNIIGRFVTHVYR 190



 Score = 37.4 bits (85), Expect(2) = 2e-31
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +1

Query: 4   SYFIRRPALHDVVTFRAPLDVSLPSNLVSEREKF 105
           SY+ RRPA+H++VTFRAP  V LP +  SE E F
Sbjct: 78  SYYFRRPAIHEIVTFRAP--VRLPGH--SEDEIF 107


Top