BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020978
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       194   2e-47
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              184   1e-44
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   181   1e-43
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...   175   9e-42
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   173   3e-41

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  194 bits (492), Expect = 2e-47
 Identities = 108/222 (48%), Positives = 145/222 (65%), Gaps = 6/222 (2%)
 Frame = +1

Query: 34  EDSGDDWIRLSYNGARTDAAGEYLHKMMASEDSQIQFSMSSGDYVESFCPRLPNRQAG-- 207
           +D+ +DWI L+Y+GAR+D +  Y+ KM+  + S IQFSM+  DYV + CP   N   G  
Sbjct: 269 KDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNH-DYVNTLCPGTSNENNGSN 327

Query: 208 -PSRSELLKLPIEERFRIWICETGPMHRFNALKYLAPDESDEDXXXXXXXXXXXXQGLWV 384
            PSR  LL LP+EERFR W+ +  P+HRF+ALK+LAPD S ED            QGLW+
Sbjct: 328 GPSRV-LLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWI 386

Query: 385 PKSSLL--KLEGVEALVRDYGLYLFSKSHRISFNDIPKKMKLKSAMEDVLKVFAVRRPDL 558
           PKSSLL  K +G++AL RDY L LFS++  I+ + +P++ KL  AM DVL   A  R  L
Sbjct: 387 PKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSL 446

Query: 559 KDWKFKQPRDVSFVQSFPDINREQEEAWEVRGEKLYIQ-IYG 681
            DWKFK+P D++F++  P I REQE+ WE R EKL  + I+G
Sbjct: 447 NDWKFKEPPDMTFIKLNPKIVREQEQTWE-RLEKLITEKIFG 487


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  184 bits (467), Expect = 1e-44
 Identities = 98/221 (44%), Positives = 132/221 (59%), Gaps = 6/221 (2%)
 Frame = +1

Query: 37  DSGDDWIRLSYNGARTDAAGEYLHKMMASEDSQIQFSMSSGDYVESFCP----RLPNRQA 204
           D+ + W+ L Y+ + +D +  YL KM+A ++S IQF MS  +YV S CP       NR  
Sbjct: 270 DAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSK 329

Query: 205 GPSRSELLKLPIEERFRIWICETGPMHRFNALKYLAPDESDEDXXXXXXXXXXXXQGLWV 384
           G SR  LL +P+EERF+  +CE  P+HRF+ALK+ APD S ED            QGLWV
Sbjct: 330 GLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWV 389

Query: 385 PKSSLLKL--EGVEALVRDYGLYLFSKSHRISFNDIPKKMKLKSAMEDVLKVFAVRRPDL 558
           PKSSLL    +GV  L RDY L LFSK   I+++ +     L  A++  L + AV RP  
Sbjct: 390 PKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSF 449

Query: 559 KDWKFKQPRDVSFVQSFPDINREQEEAWEVRGEKLYIQIYG 681
           +DWKFK+P DVSF++  PDI REQ   WE   +++   I+G
Sbjct: 450 RDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHG 490


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score =  181 bits (459), Expect = 1e-43
 Identities = 101/235 (42%), Positives = 136/235 (57%), Gaps = 16/235 (6%)
 Frame = +1

Query: 25  IKLEDSGDD----------WIRLSYNGARTDAAGEYLHKMMASEDSQIQFSMSSGDYVES 174
           +KLE S ++          W+ L Y+ + +D +  YL KM+A ++S IQF MS  +YV S
Sbjct: 240 VKLEVSNEEESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNS 299

Query: 175 FCP----RLPNRQAGPSRSELLKLPIEERFRIWICETGPMHRFNALKYLAPDESDEDXXX 342
            CP       NR  G SR  LL +P+EERF+  +CE  P+HRF+ALK+ APD S ED   
Sbjct: 300 LCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLG 359

Query: 343 XXXXXXXXXQGLWVPKSSLLKL--EGVEALVRDYGLYLFSKSHRISFNDIPKKMKLKSAM 516
                    QGLWVPKSSLL    +GV  L RDY L LFSK   I+++ +     L  A+
Sbjct: 360 VLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKAL 419

Query: 517 EDVLKVFAVRRPDLKDWKFKQPRDVSFVQSFPDINREQEEAWEVRGEKLYIQIYG 681
           +  L + AV RP  +DWKFK+P DVSF++  PDI REQ   WE   +++   I+G
Sbjct: 420 KGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHG 474


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  175 bits (443), Expect = 9e-42
 Identities = 96/226 (42%), Positives = 136/226 (60%), Gaps = 8/226 (3%)
 Frame = +1

Query: 10  EEKPEIKLEDSGDDWIRLSYNGARTDAAGEYLHKMMASEDSQIQFSMSSGDYVESFCPRL 189
           E+KP+++     + WI L Y+G+++D +  YL  M+A E S I+F+M+  DY+ S CP +
Sbjct: 266 EQKPDVE-----ESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGI 320

Query: 190 PNRQA---GPSRSELLKLPIEERFRIWICETGPMHRFNALKYLAPDESDEDXXXXXXXXX 360
            N      GPSR  LL LP+EER +    E  P+HRF AL++L P++S ED         
Sbjct: 321 SNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYG 380

Query: 361 XXXQGLWVPKSSLL-----KLEGVEALVRDYGLYLFSKSHRISFNDIPKKMKLKSAMEDV 525
              QGLWVPK+SLL       E V+   RDY L LFSKS  ++ +++   MK    ++  
Sbjct: 381 QLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELNVPMK-PLILKSF 439

Query: 526 LKVFAVRRPDLKDWKFKQPRDVSFVQSFPDINREQEEAWEVRGEKL 663
           L +FAV RP  KDWKFK+  D  FV+ +PDI R+QE+AWEV G+ +
Sbjct: 440 LNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNI 485


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score =  173 bits (439), Expect = 3e-41
 Identities = 94/229 (41%), Positives = 135/229 (58%), Gaps = 14/229 (6%)
 Frame = +1

Query: 19  PEIKLEDSGDD----------WIRLSYNGARTDAAGEYLHKMMASEDSQIQFSMSSGDYV 168
           PE+KLEDS +           WI L Y+G+++D +  YL KM+A E S ++F+M+  DY+
Sbjct: 249 PEVKLEDSNEGKPIGSSKKQCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYM 308

Query: 169 ESFCPRLPNRQA---GPSRSELLKLPIEERFRIWICETGPMHRFNALKYLAPDESDEDXX 339
            S CP   N +    GP R  LL LP+ ER +  I E  P+ RF+ LK+ APD+S ED  
Sbjct: 309 SSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVL 368

Query: 340 XXXXXXXXXXQGLWVPKSSLLKLEGVEAL-VRDYGLYLFSKSHRISFNDIPKKMKLKSAM 516
                     QGLW PKSSLL  +      +RDY L LFSK+  I+ + +   +K+K  +
Sbjct: 369 KVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEI 428

Query: 517 EDVLKVFAVRRPDLKDWKFKQPRDVSFVQSFPDINREQEEAWEVRGEKL 663
           +  L +FAV RP  KDWKFK+  D +F++ +PDI ++QEEAW+   ++L
Sbjct: 429 KSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRL 477