BLASTX nr result

ID: Bupleurum21_contig00020973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020973
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              151   1e-34
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   151   1e-34
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   146   4e-33
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin...   143   3e-32
ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s...   135   5e-30

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  151 bits (381), Expect = 1e-34
 Identities = 64/111 (57%), Positives = 74/111 (66%)
 Frame = +2

Query: 2   MEFCPNCGMLLQYELPHLGRPARFFCPVCPYVCQLESXXXXXXXXXXXXXXIDPVYDYDD 181
           MEFCP CG  LQYELPH+GRPARFFCP CPYVC +E+              I+P++  DD
Sbjct: 65  MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 124

Query: 182 FKNASTTDENCPKCGHGKAAFRQFQNRSADEPMTTSYACMNETCRHQWREN 334
            KN  TTD  CP C  GKA F+Q Q RSADEPM+T Y C+NE C  QWRE+
Sbjct: 125 MKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  151 bits (381), Expect = 1e-34
 Identities = 64/111 (57%), Positives = 74/111 (66%)
 Frame = +2

Query: 2   MEFCPNCGMLLQYELPHLGRPARFFCPVCPYVCQLESXXXXXXXXXXXXXXIDPVYDYDD 181
           MEFCP CG  LQYELPH+GRPARFFCP CPYVC +E+              I+P++  DD
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60

Query: 182 FKNASTTDENCPKCGHGKAAFRQFQNRSADEPMTTSYACMNETCRHQWREN 334
            KN  TTD  CP C  GKA F+Q Q RSADEPM+T Y C+NE C  QWRE+
Sbjct: 61  MKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  146 bits (368), Expect = 4e-33
 Identities = 60/110 (54%), Positives = 76/110 (69%)
 Frame = +2

Query: 2   MEFCPNCGMLLQYELPHLGRPARFFCPVCPYVCQLESXXXXXXXXXXXXXXIDPVYDYDD 181
           MEFCP+CG +LQYELP++GRP+RFFC  CPYVC +E+              I+P++  DD
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFSEDD 60

Query: 182 FKNASTTDENCPKCGHGKAAFRQFQNRSADEPMTTSYACMNETCRHQWRE 331
             NA +T+  CP CGHGKAAF++FQ RSADEP T  Y C+N  C+ QWRE
Sbjct: 61  MTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
           gi|255631470|gb|ACU16102.1| unknown [Glycine max]
          Length = 111

 Score =  143 bits (360), Expect = 3e-32
 Identities = 59/110 (53%), Positives = 75/110 (68%)
 Frame = +2

Query: 2   MEFCPNCGMLLQYELPHLGRPARFFCPVCPYVCQLESXXXXXXXXXXXXXXIDPVYDYDD 181
           MEFCP CG +LQYELP++GRP+RFFC  CPYVC +E+              I+P++  DD
Sbjct: 1   MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60

Query: 182 FKNASTTDENCPKCGHGKAAFRQFQNRSADEPMTTSYACMNETCRHQWRE 331
             NA++T+  CP CGHGKAAF++FQ RSAD P T  Y C+N  C+ QWRE
Sbjct: 61  MTNAASTEATCPFCGHGKAAFKEFQTRSADGPATLFYKCLNNECKKQWRE 110


>ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 111

 Score =  135 bits (341), Expect = 5e-30
 Identities = 59/111 (53%), Positives = 72/111 (64%)
 Frame = +2

Query: 2   MEFCPNCGMLLQYELPHLGRPARFFCPVCPYVCQLESXXXXXXXXXXXXXXIDPVYDYDD 181
           MEFCP CG +LQ+ELP++G+ +RFFCP CPYV  LE+              ++P+   DD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 182 FKNASTTDENCPKCGHGKAAFRQFQNRSADEPMTTSYACMNETCRHQWREN 334
            KNA+ T+  CP C  GKAAF Q Q RSADEP TT Y CMNE CR  WRE+
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111


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