BLASTX nr result

ID: Bupleurum21_contig00020969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020969
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   139   3e-31
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   116   4e-24
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   110   2e-22
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   110   2e-22

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  139 bits (351), Expect = 3e-31
 Identities = 87/194 (44%), Positives = 107/194 (55%)
 Frame = -2

Query: 585  ASGLARTAATLLKEAQLTXXXXXXXXXXXPHQTSGQETPSLQVYWPSRNTSCGFYSDKLK 406
            ASGL+ TAA LLKEAQLT            HQ S QETPS+Q+ WPS   + GF S+KLK
Sbjct: 1258 ASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIAGGFLSNKLK 1317

Query: 405  SAFLDIDXXXXXXXXXXXXXKRYLAFSSTLGLKPKVHPNSQDANPASTSNVNVTIKKLRF 226
                D D             K+ L FSSTL  + +  P S DA   + S V  T KK   
Sbjct: 1318 PTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHDAQSPAISKVFSTSKKSSA 1377

Query: 225  PAGTSETRSPSAIRPIVDVDSAFKTPITLPMKRKLSEQTDTERFRSSKRLITSDNGLRNA 46
            PA   ET S +  +P +D +S +KTPI LPMKRKL+E  D     S KRL TS+ GL + 
Sbjct: 1378 PASVPETPSVTTSKPNLDAESQYKTPIILPMKRKLTELKDVGLASSVKRLNTSELGLHSP 1437

Query: 45   VYATPTSVSYSSLL 4
            V +TP +V  S+LL
Sbjct: 1438 VCSTPNTVRKSNLL 1451


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  134 bits (338), Expect = 1e-29
 Identities = 87/197 (44%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
 Frame = -2

Query: 585  ASGLARTAATLLKEAQLTXXXXXXXXXXXPHQTSGQETPSLQVYWPSRNTSCGFYSDKLK 406
            ASGL+ TAA LLKEAQLT            HQ S QETPS+Q+ WPS   + GF S+KLK
Sbjct: 1084 ASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIAGGFLSNKLK 1143

Query: 405  SAFLDIDXXXXXXXXXXXXXKRYLAFSSTLGLKPKVHPNSQDANPASTSNVNVTIKKLRF 226
                D D             K+ L FSSTL  + +  P S DA   + S V  T KK   
Sbjct: 1144 PTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHDAQSPAISKVFSTSKKSSA 1203

Query: 225  PAGTSETRSPSAIRPIVDVDSAFKTPITLPMKRKLSEQTDTERFRSSKRLITSDNGLRNA 46
            PA   ET S +  +P +D +S +KTPI LPMKRKL+E  D     S KRL TS+ GL + 
Sbjct: 1204 PASVPETPSVTTSKPNLDAESQYKTPIILPMKRKLTELKDVGLASSVKRLNTSELGLHSP 1263

Query: 45   VY----ATPTSVSYSSL 7
            VY     TP+SV   +L
Sbjct: 1264 VYQYGRPTPSSVLTDNL 1280


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score =  116 bits (290), Expect = 4e-24
 Identities = 77/194 (39%), Positives = 99/194 (51%)
 Frame = -2

Query: 585  ASGLARTAATLLKEAQLTXXXXXXXXXXXPHQTSGQETPSLQVYWPSRNTSCGFYSDKLK 406
            ASGLA TAATLLKEAQLT            HQT+ QETPS Q+ WPS  T CGF   K K
Sbjct: 1113 ASGLAATAATLLKEAQLTPLPSLAAASSLMHQTTTQETPSTQLQWPSGRTPCGFMCKKSK 1172

Query: 405  SAFLDIDXXXXXXXXXXXXXKRYLAFSSTLGLKPKVHPNSQDANPASTSNVNVTIKKLRF 226
            +   D D             K+ L FS T   + ++   + D+N +S    +   K+   
Sbjct: 1173 AIARDED-SCLRCESALSSKKKPLVFSPTFNSQSRIQSLTLDSNQSSFKKASSGPKQSAA 1231

Query: 225  PAGTSETRSPSAIRPIVDVDSAFKTPITLPMKRKLSEQTDTERFRSSKRLITSDNGLRNA 46
                SE    +  +   D +S  KTPI LPMKRKLS+  D     S KR+ T ++GLR+ 
Sbjct: 1232 AGNLSEALPEALPKNNPDTESLCKTPIVLPMKRKLSDLKDVGLASSGKRVNTGEHGLRSP 1291

Query: 45   VYATPTSVSYSSLL 4
            V  TP +V  +SLL
Sbjct: 1292 VCLTPNAVRKNSLL 1305


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  110 bits (275), Expect = 2e-22
 Identities = 74/195 (37%), Positives = 102/195 (52%)
 Frame = -2

Query: 585  ASGLARTAATLLKEAQLTXXXXXXXXXXXPHQTSGQETPSLQVYWPSRNTSCGFYSDKLK 406
            ASGL++ A  LLKEA+LT            +Q S  ETPS Q+ WP   + CGF +DK K
Sbjct: 1148 ASGLSKAAYALLKEAELTPLPHLAAPSSLAYQASKLETPSTQLQWPCGRSPCGFLTDKSK 1207

Query: 405  SAFLDIDXXXXXXXXXXXXXKRYLAFSSTLGLKPKVHPNSQDANPASTSNVNVTIKKLRF 226
             +  + D             K+ L F  T     K  P S +++ ++   V+ T K+   
Sbjct: 1208 LSSREEDASMKCDYNMSCPRKKPLVF--TPFTHSKSLPKSLESSSSAVRKVSSTSKQSAA 1265

Query: 225  PAGTSETRSPSAIRPIVDVDSAFKTPITLPMKRKLSEQTDTERFRSSKRLITSDNGLRNA 46
            P  ++ET       P +D +S  KTPI LPMKRKLSE  DT    SSKRL ++++GLR+ 
Sbjct: 1266 PLSSNETT------PSIDTESQCKTPIILPMKRKLSELKDTGTVLSSKRLHSNESGLRSP 1319

Query: 45   VYATPTSVSYSSLLT 1
            +  TP S   SSL+T
Sbjct: 1320 ICPTPISSRKSSLIT 1334


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
            sativus]
          Length = 1915

 Score =  110 bits (275), Expect = 2e-22
 Identities = 74/195 (37%), Positives = 102/195 (52%)
 Frame = -2

Query: 585  ASGLARTAATLLKEAQLTXXXXXXXXXXXPHQTSGQETPSLQVYWPSRNTSCGFYSDKLK 406
            ASGL++ A  LLKEA+LT            +Q S  ETPS Q+ WP   + CGF +DK K
Sbjct: 1163 ASGLSKAAYALLKEAELTPLPHLAAPSSLAYQASKLETPSTQLQWPCGRSPCGFLTDKSK 1222

Query: 405  SAFLDIDXXXXXXXXXXXXXKRYLAFSSTLGLKPKVHPNSQDANPASTSNVNVTIKKLRF 226
             +  + D             K+ L F  T     K  P S +++ ++   V+ T K+   
Sbjct: 1223 LSSREEDASMKCDYNMSCPRKKPLVF--TPFTHSKSLPKSLESSSSAVRKVSSTSKQSAA 1280

Query: 225  PAGTSETRSPSAIRPIVDVDSAFKTPITLPMKRKLSEQTDTERFRSSKRLITSDNGLRNA 46
            P  ++ET       P +D +S  KTPI LPMKRKLSE  DT    SSKRL ++++GLR+ 
Sbjct: 1281 PLSSNETT------PSIDTESQCKTPIILPMKRKLSELKDTGTVLSSKRLHSNESGLRSP 1334

Query: 45   VYATPTSVSYSSLLT 1
            +  TP S   SSL+T
Sbjct: 1335 ICPTPISSRKSSLIT 1349


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