BLASTX nr result

ID: Bupleurum21_contig00020960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020960
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556363.1| PREDICTED: uncharacterized protein LOC100796...   362   1e-97
gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461...   357   3e-96
emb|CAA44318.1| H1flk [Arabidopsis thaliana]                          357   3e-96
ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|1107422...   357   3e-96
ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp....   357   4e-96

>ref|XP_003556363.1| PREDICTED: uncharacterized protein LOC100796923 [Glycine max]
          Length = 523

 Score =  362 bits (929), Expect = 1e-97
 Identities = 197/298 (66%), Positives = 216/298 (72%), Gaps = 6/298 (2%)
 Frame = -1

Query: 1144 GKSTVLKDILNESFWSGAATSAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTS 965
            GKSTVLKDIL ESFWSGAA++AVVVEADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+S
Sbjct: 226  GKSTVLKDILKESFWSGAASNAVVVEADAFKESDVIYRALSSRGHHDDMLQTAELVHQSS 285

Query: 964  TDAASSLLVTALNEGRDVIMDGTFSWEPFVQQTISMARNVHKHRYRMGVGYKVQEDGTTI 785
            TDAASSLLVTALNEGRDVIMDGT SWEPFV+QTI+MARNVHKHRYRMGVGYKV EDGT  
Sbjct: 286  TDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMARNVHKHRYRMGVGYKVAEDGTIT 345

Query: 784  ENYWEQ------XXXXXXXXXXXXXXRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXV 623
            ENYWEQ                    +PYRIELVGVVCD YL                 V
Sbjct: 346  ENYWEQVNDAEEHQSEEISNGEAHTQKPYRIELVGVVCDGYLAVVRGIRRAIMTGRAVRV 405

Query: 622  NSQLKSHKRFANAFPNYCLLVDHARLYCTNGVGCPPTLIGYKDGESKLLVDPDEIRVLKM 443
            NSQLKSHKRFANAFP YC LVD+ARLYCTN VG PP LIG KDG+  LLVD +EI+ L+ 
Sbjct: 406  NSQLKSHKRFANAFPRYCKLVDNARLYCTNAVGGPPKLIGRKDGDHNLLVDREEIKCLET 465

Query: 442  VSKLNDEAESIEELYAAGDHDGEEMIVGTGSHVWKDIVLLPDRAKIQQELTIAIRKIE 269
            +  LN  A+SI EL     H     I+  GS VW DIV+ P R   Q+EL  +I+KIE
Sbjct: 466  LGSLNAGADSIYEL-----HKEPSPIMEPGS-VWNDIVMSPSRPSDQKELKESIQKIE 517


>gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461) [Arabidopsis
            thaliana] gi|111074216|gb|ABH04481.1| At1g04280
            [Arabidopsis thaliana]
          Length = 480

 Score =  357 bits (916), Expect = 3e-96
 Identities = 187/292 (64%), Positives = 209/292 (71%)
 Frame = -1

Query: 1144 GKSTVLKDILNESFWSGAATSAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTS 965
            GKSTVLKDI  ESFWS A   AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+S
Sbjct: 189  GKSTVLKDIFLESFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSS 248

Query: 964  TDAASSLLVTALNEGRDVIMDGTFSWEPFVQQTISMARNVHKHRYRMGVGYKVQEDGTTI 785
            TDAASSLLVTALN+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV E+GT  
Sbjct: 249  TDAASSLLVTALNDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTIT 308

Query: 784  ENYWEQXXXXXXXXXXXXXXRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXVNSQLKS 605
            E YWE+              +PYRIELVGVVCDAYL                 V  QL S
Sbjct: 309  EKYWEEEEEETKENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNS 368

Query: 604  HKRFANAFPNYCLLVDHARLYCTNGVGCPPTLIGYKDGESKLLVDPDEIRVLKMVSKLND 425
            HKRFANAFP YC LVD+ARLYCTN VG PP LI +KDG SKLLVDP++I  LK VS LN 
Sbjct: 369  HKRFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNP 428

Query: 424  EAESIEELYAAGDHDGEEMIVGTGSHVWKDIVLLPDRAKIQQELTIAIRKIE 269
            +AESI ELY       +   +     VW D+VL+P R K+Q+EL+ AIR+IE
Sbjct: 429  DAESIYELYP------DPSQLSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 474


>emb|CAA44318.1| H1flk [Arabidopsis thaliana]
          Length = 525

 Score =  357 bits (916), Expect = 3e-96
 Identities = 187/292 (64%), Positives = 209/292 (71%)
 Frame = -1

Query: 1144 GKSTVLKDILNESFWSGAATSAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTS 965
            GKSTVLKDI  ESFWS A   AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+S
Sbjct: 234  GKSTVLKDIFLESFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSS 293

Query: 964  TDAASSLLVTALNEGRDVIMDGTFSWEPFVQQTISMARNVHKHRYRMGVGYKVQEDGTTI 785
            TDAASSLLVTALN+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV E+GT  
Sbjct: 294  TDAASSLLVTALNDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTIT 353

Query: 784  ENYWEQXXXXXXXXXXXXXXRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXVNSQLKS 605
            E YWE+              +PYRIELVGVVCDAYL                 V  QL S
Sbjct: 354  EKYWEEEEEETKENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNS 413

Query: 604  HKRFANAFPNYCLLVDHARLYCTNGVGCPPTLIGYKDGESKLLVDPDEIRVLKMVSKLND 425
            HKRFANAFP YC LVD+ARLYCTN VG PP LI +KDG SKLLVDP++I  LK VS LN 
Sbjct: 414  HKRFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNP 473

Query: 424  EAESIEELYAAGDHDGEEMIVGTGSHVWKDIVLLPDRAKIQQELTIAIRKIE 269
            +AESI ELY       +   +     VW D+VL+P R K+Q+EL+ AIR+IE
Sbjct: 474  DAESIYELYP------DPSQLSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 519


>ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|110742284|dbj|BAE99067.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332189557|gb|AEE27678.1| protein H1flk [Arabidopsis
            thaliana]
          Length = 534

 Score =  357 bits (916), Expect = 3e-96
 Identities = 187/292 (64%), Positives = 209/292 (71%)
 Frame = -1

Query: 1144 GKSTVLKDILNESFWSGAATSAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTS 965
            GKSTVLKDI  ESFWS A   AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+S
Sbjct: 243  GKSTVLKDIFLESFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSS 302

Query: 964  TDAASSLLVTALNEGRDVIMDGTFSWEPFVQQTISMARNVHKHRYRMGVGYKVQEDGTTI 785
            TDAASSLLVTALN+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV E+GT  
Sbjct: 303  TDAASSLLVTALNDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTIT 362

Query: 784  ENYWEQXXXXXXXXXXXXXXRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXVNSQLKS 605
            E YWE+              +PYRIELVGVVCDAYL                 V  QL S
Sbjct: 363  EKYWEEEEEETKENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNS 422

Query: 604  HKRFANAFPNYCLLVDHARLYCTNGVGCPPTLIGYKDGESKLLVDPDEIRVLKMVSKLND 425
            HKRFANAFP YC LVD+ARLYCTN VG PP LI +KDG SKLLVDP++I  LK VS LN 
Sbjct: 423  HKRFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNP 482

Query: 424  EAESIEELYAAGDHDGEEMIVGTGSHVWKDIVLLPDRAKIQQELTIAIRKIE 269
            +AESI ELY       +   +     VW D+VL+P R K+Q+EL+ AIR+IE
Sbjct: 483  DAESIYELYP------DPSQLSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 528


>ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338047|gb|EFH68464.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score =  357 bits (915), Expect = 4e-96
 Identities = 187/292 (64%), Positives = 209/292 (71%)
 Frame = -1

Query: 1144 GKSTVLKDILNESFWSGAATSAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTS 965
            GKSTVLKDI  ESFWS A   AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+S
Sbjct: 189  GKSTVLKDIFQESFWSEAEADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSS 248

Query: 964  TDAASSLLVTALNEGRDVIMDGTFSWEPFVQQTISMARNVHKHRYRMGVGYKVQEDGTTI 785
            TDAASSLLVTALN+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMGVGYKV EDGT  
Sbjct: 249  TDAASSLLVTALNDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGVGYKVSEDGTIT 308

Query: 784  ENYWEQXXXXXXXXXXXXXXRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXVNSQLKS 605
            E YWE+              +PYRIELVGVVCDAYL                 V  QL S
Sbjct: 309  EKYWEE-EEETKENGKQKIFKPYRIELVGVVCDAYLAVARGIRRALIVKRAVRVKPQLNS 367

Query: 604  HKRFANAFPNYCLLVDHARLYCTNGVGCPPTLIGYKDGESKLLVDPDEIRVLKMVSKLND 425
            HKRFANAFP YC LVD+ARLYCTN VG PP LI +KDG SKLLVDP++   LK VS LN 
Sbjct: 368  HKRFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDFECLKRVSSLNP 427

Query: 424  EAESIEELYAAGDHDGEEMIVGTGSHVWKDIVLLPDRAKIQQELTIAIRKIE 269
            +AESI ELY       +   +     VW D+VL+P R K+Q+EL+ A+R+IE
Sbjct: 428  DAESIYELYP------DPSQLSKPGSVWNDVVLVPSRPKVQKELSDAVRRIE 473


Top