BLASTX nr result

ID: Bupleurum21_contig00020941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020941
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514882.1| conserved hypothetical protein [Ricinus comm...    58   4e-06
ref|XP_002299325.1| predicted protein [Populus trichocarpa] gi|2...    58   5e-06

>ref|XP_002514882.1| conserved hypothetical protein [Ricinus communis]
           gi|223545933|gb|EEF47436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 38/102 (37%), Positives = 47/102 (46%)
 Frame = -2

Query: 662 ITLHYMPARVLVPLLYNVMRLFVILDRL*DVWLNKNLLENAQFKTWNICCSLYWCCYFII 483
           ++L   P R LVP+LY V R+FVILD + DVW+NK L  NAQFK                
Sbjct: 161 LSLFSPPVRALVPMLYTVRRIFVILDWIQDVWINKTLPANAQFK---------------- 204

Query: 482 VIDLLSLSAIYEFXXXXXXXMYDVSLY*IGRSLAAANLAYVS 357
                                 D++ +  GRSLAAANL Y S
Sbjct: 205 ----------------------DIAWFWFGRSLAAANLLYFS 224


>ref|XP_002299325.1| predicted protein [Populus trichocarpa] gi|222846583|gb|EEE84130.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/54 (51%), Positives = 34/54 (62%)
 Frame = -2

Query: 662 ITLHYMPARVLVPLLYNVMRLFVILDRL*DVWLNKNLLENAQFKTWNICCSLYW 501
           ++L   P R LVPLLY V R+FV++D + DVWLNK L  NAQ K    C  L W
Sbjct: 161 LSLFSPPVRALVPLLYTVRRIFVVIDWINDVWLNKTLPANAQVKVNRHCVVLVW 214


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