BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020929
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   135   5e-30
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             132   3e-29
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   130   9e-29
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             129   3e-28
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...   125   5e-27

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/96 (66%), Positives = 75/96 (78%)
 Frame = +3

Query: 3    WSHKDMTGIDPEVVVHKLQVNPQHPPVKQKRRKFAPDRNKVINEEVQKLLDNGSVREVNY 182
            WS +DM GID  V  H+L V+P + P+KQKRRK  PDR K +NEEV+KLLD GS+ EV Y
Sbjct: 757  WSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVEVRY 816

Query: 183  PE*LANVVLVRKKNGKPRVCIDFTDLNKACPKDPFP 290
            P+ L N V+V+KKNGK RVCIDFTDLNKACPKD FP
Sbjct: 817  PDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFP 852


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/96 (62%), Positives = 74/96 (77%)
 Frame = +3

Query: 3    WSHKDMTGIDPEVVVHKLQVNPQHPPVKQKRRKFAPDRNKVINEEVQKLLDNGSVREVNY 182
            WS +DM GIDP +  H+L V+P   PVKQKRRK  P+R + +NEEV+KLL  G + EV Y
Sbjct: 799  WSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKY 858

Query: 183  PE*LANVVLVRKKNGKPRVCIDFTDLNKACPKDPFP 290
            PE LAN V+V+KKNGK RVC+D+TDLNKACPKD +P
Sbjct: 859  PEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYP 894


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/92 (68%), Positives = 72/92 (78%)
 Frame = +3

Query: 15  DMTGIDPEVVVHKLQVNPQHPPVKQKRRKFAPDRNKVINEEVQKLLDNGSVREVNYPE*L 194
           DM GIDPEV  H+L V+P    VKQKRRK  P+R+K +N+EV KLLD GS+ EV YPE L
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535

Query: 195 ANVVLVRKKNGKPRVCIDFTDLNKACPKDPFP 290
           AN V+V+KKN K RVCIDFTDLNKACPKD FP
Sbjct: 536 ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFP 567


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  129 bits (324), Expect = 3e-28
 Identities = 59/91 (64%), Positives = 72/91 (79%)
 Frame = +3

Query: 18  MTGIDPEVVVHKLQVNPQHPPVKQKRRKFAPDRNKVINEEVQKLLDNGSVREVNYPE*LA 197
           M GI+P ++ H+L V+P   PVKQKRRK   +R K++N+EV KLL  GS+REV YPE +A
Sbjct: 1   MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKIVNDEVDKLLKIGSIREVQYPEWVA 60

Query: 198 NVVLVRKKNGKPRVCIDFTDLNKACPKDPFP 290
           N V+V+KKNGK RVCIDFTDLNKACPKD FP
Sbjct: 61  NTVVVKKKNGKDRVCIDFTDLNKACPKDSFP 91


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/92 (64%), Positives = 71/92 (77%)
 Frame = +3

Query: 15  DMTGIDPEVVVHKLQVNPQHPPVKQKRRKFAPDRNKVINEEVQKLLDNGSVREVNYPE*L 194
           +MTGI  EV+ H+L V+P   PVKQK RK  PDR + +N EV +LL+ G +REV YPE L
Sbjct: 597 EMTGISTEVISHELNVDPTFKPVKQKYRKLGPDRAEAVNAEVVRLLEEGLIREVKYPEWL 656

Query: 195 ANVVLVRKKNGKPRVCIDFTDLNKACPKDPFP 290
           AN V+V+KKNGK RVC+DFTDLNKACPKD FP
Sbjct: 657 ANPVVVKKKNGKWRVCVDFTDLNKACPKDCFP 688