BLASTX nr result

ID: Bupleurum21_contig00020925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020925
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arab...    83   8e-14
ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arab...    82   2e-13
gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. ...    80   4e-13
gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. ...    80   7e-13
ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...    79   1e-12

>ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata] gi|297339191|gb|EFH69608.1| hypothetical protein
            ARALYDRAFT_889995 [Arabidopsis lyrata subsp. lyrata]
          Length = 1401

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
 Frame = +2

Query: 5    LPVELGNCESLKELHAVGLNVL-RLPDSIGRLSKLIDLRLSYNEQLTTLPDTISSMQSLT 181
            +P    N  SL+EL A    +  ++PD + +LS L+ L L  N    +LP ++  + +L 
Sbjct: 1063 VPNSFSNLTSLEELDACSWRISGKIPDDLEKLSSLMKLNLG-NNYFHSLPSSLVGLSNLQ 1121

Query: 182  TLNIENCHYLSSVPELPPNLEYINADNCRSMESIQNXXXXXXXXXXXXXXCSHLTEIVGL 361
             L++ +C  L  +P LP  LE++N  NC S+ES+ +              C  + +I GL
Sbjct: 1122 ELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGL 1181

Query: 362  EELNSISMLRLGGCNSVLLAKIMTKRLFQIYSEFGHEIK--------INIPATEFLPDWI 517
            E L ++  L + GCNS   +  + KRL ++       ++        +++P    +PDW 
Sbjct: 1182 EHLMALKRLYMTGCNS-NYSLAVKKRLSKVIPRTSQNLRASLKMLRNLSLPGNR-VPDWF 1239

Query: 518  VQSP 529
             Q P
Sbjct: 1240 SQGP 1243


>ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata] gi|297339192|gb|EFH69609.1| hypothetical protein
            ARALYDRAFT_313276 [Arabidopsis lyrata subsp. lyrata]
          Length = 1541

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
 Frame = +2

Query: 5    LPVELGNCESLKELHAVGLNVL-RLPDSIGRLSKLIDLRLSYNEQLTTLPDTISSMQSLT 181
            +P    N  SL+EL A    +  ++PD + +LS L+ L L  N    +LP ++  + +L 
Sbjct: 1215 VPNSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNLG-NNYFHSLPSSLVGLSNLQ 1273

Query: 182  TLNIENCHYLSSVPELPPNLEYINADNCRSMESIQNXXXXXXXXXXXXXXCSHLTEIVGL 361
             L++ +C  L  +P LP  LE++N  NC S+ES+ +              C  + +I GL
Sbjct: 1274 ELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGL 1333

Query: 362  EELNSISMLRLGGCN---SVLLAKIMTKRLFQIYSEFGHEIKINIPATEFLPDWIVQSP 529
            E L ++  L + GCN   S+ + K ++K   ++         +++P    +PDW+ Q P
Sbjct: 1334 EHLMALKRLYMTGCNSNYSLAVKKRLSKASLKMLR------NLSLPGNR-VPDWLSQGP 1385


>gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
 Frame = +2

Query: 5    LPVELGNCESLKELHAVGLNVL-RLPDSIGRLSKLIDLRLSYNEQLTTLPDTISSMQSLT 181
            +P    N  SL+E+ A G  +  ++PD +G+LS L  L L  N    +LP ++  + +L 
Sbjct: 931  VPNSFSNLLSLEEIDAKGWGIWGKVPDDLGKLSSLKKLELG-NNYFHSLPSSLEGLWNLK 989

Query: 182  TLNIENCHYLSSVPELPPNLEYINADNCRSMESIQNXXXXXXXXXXXXXXCSHLTEIVGL 361
               + +C  L  +P LP  LE +N  NC ++ESI +              C  + ++ GL
Sbjct: 990  LFTLYDCQELKCLPPLPWKLEKLNLANCFALESIADLSKLEILEELNLTNCGKVDDVPGL 1049

Query: 362  EELNSISMLRLGGCNSVLLAKIMTKRLFQIYSEFGHEIKINIPATEFLPDWIVQSP 529
            E L ++  L + GCNS  L+  + KRL +   +      +++P    +PDW  Q P
Sbjct: 1050 EHLKALKRLYMSGCNS-RLSVAVKKRLSKASLKMMR--NLSLPGNR-IPDWFSQGP 1101


>gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 47/134 (35%), Positives = 68/134 (50%)
 Frame = +2

Query: 5    LPVELGNCESLKELHAVGLNVLRLPDSIGRLSKLIDLRLSYNEQLTTLPDTISSMQSLTT 184
            LP   G  +SL  L+     V+ LP S G LS L  L L  N +  +LP ++  + SL  
Sbjct: 1010 LPNSFGGLKSLCHLYMEETLVMELPGSFGNLSNLRVLNLG-NNKFHSLPSSLKGLSSLKE 1068

Query: 185  LNIENCHYLSSVPELPPNLEYINADNCRSMESIQNXXXXXXXXXXXXXXCSHLTEIVGLE 364
            L++ +C  L+ +P LP NLE +N  NC S+ESI +              C  + +I GLE
Sbjct: 1069 LSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTMLHELNLTNCGIVDDIPGLE 1128

Query: 365  ELNSISMLRLGGCN 406
             L ++  L + GCN
Sbjct: 1129 HLTALKRLDMSGCN 1142


>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
 Frame = +2

Query: 5    LPVELGNCESLKELHAVGLNVL-RLPDSIGRLSKLIDLRLSYNEQLTTLPDTISSMQSLT 181
            +P    N   L EL A    +  ++PD   +LS L  L L  N    +LP ++  +  L 
Sbjct: 835  IPSSFCNLTLLSELDACAWRLSGKIPDEFEKLSLLKTLNLGQNN-FHSLPSSLKGLSILK 893

Query: 182  TLNIENCHYLSSVPELPPNLEYINADNCRSMESIQNXXXXXXXXXXXXXXCSHLTEIVGL 361
             L++ NC  L S+P LP +L  +NADNC ++E+I +              C  L +I GL
Sbjct: 894  ELSLPNCTELISLPSLPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLIDIPGL 953

Query: 362  EELNSISMLRLGGCNSVLLAKIMTKRLFQIYSEFGHEIKINIPATEFLPDWIVQSPYWID 541
            E L S+  L L GCN+   +  + KRL ++     +   +++P T+ LP+W+ +      
Sbjct: 954  ECLKSLRRLYLSGCNA--CSSKVCKRLSKVV--LRNFQNLSMPGTK-LPEWLSRETV--- 1005

Query: 542  QSLDETSQLSYYESLSSDRNKPSSSLVQTISFIMPQ-NMTHDFLGII 679
                         S S  +N   +S+V  + F + Q NM +   G++
Sbjct: 1006 -------------SFSKRKNLELTSVVIGVIFSIKQNNMKNQMSGVV 1039


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