BLASTX nr result

ID: Bupleurum21_contig00020920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020920
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]   166   1e-38
ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   166   2e-38
ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   162   2e-37
emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]   159   2e-36
ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   138   3e-30

>emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
          Length = 1142

 Score =  166 bits (421), Expect = 1e-38
 Identities = 130/340 (38%), Positives = 168/340 (49%), Gaps = 10/340 (2%)
 Frame = +2

Query: 38   SGEDPSWRSMDKTKA-----VRTATATDINYIQATVPEASTLPATKHKSTQRKVHDEKSN 202
            SGE+    SM K  A     +  A   D      TV E S+  +  + S   K  D K +
Sbjct: 822  SGENFQVDSMPKGSAAGDSLIEKADDGDQKLSTKTV-EFSSPSSMMNGSIHMKTLDCKPH 880

Query: 203  GRLKKKFSKFPTMKMHLSSKISLGTFLSVRKKHKSRKGKLVTT---NLIQERLVD-GNNS 370
             + KKK  K     MHL S       LS+RKK K R+ K  T+   NL QE L++ G  S
Sbjct: 881  RKFKKKNMKCRMRSMHLVSNNLFRASLSLRKKKKHRRSKRHTSDIKNLTQEHLLEAGCLS 940

Query: 371  PDLEPSTSQKCQTTQFGGLNHSERRRESCGFKKEKCCXXXXXXXXXXGDPMANNKVERNE 550
                PSTS K QTT  G  N   +R +    K +K               M    VE  +
Sbjct: 941  VGQGPSTSDKTQTTSVGPTNRWGKRVKHGTKKGDKRTAGKDVKTSNSECVMDTMDVEFRD 1000

Query: 551  KTEENCAMLASNDPTQRKTASGSAANSLDDRGPCHSKDSTKESLQNRSICSKDNRNDSMK 730
            +  E  AMLA++   Q+ + S +                 K+    RS    D++ D M+
Sbjct: 1001 RIGEEGAMLATDKEPQKSSISVA-----------------KQRDAQRSDSLNDSKRDQMQ 1043

Query: 731  NGLMSVLTRGLEETIVARWDEMGSYATHRTEQSDRGNG-SIGYVGDEWDEEYDRGKRKKI 907
            NGLMS+LTRGL+ETIVARWDE+  + ++R  +S    G +IGYV DEWDEEYDRGKRKK+
Sbjct: 1044 NGLMSMLTRGLDETIVARWDEI-EWPSNRVMESRSVEGVTIGYVPDEWDEEYDRGKRKKV 1102

Query: 908  RSFKDDFGGPNPFQEIXXXXXXXXXXRMGYSTSGNKPFRI 1027
            RS    FGGPNPFQEI          +   S+SGN+PFRI
Sbjct: 1103 RSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 1142


>ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 997

 Score =  166 bits (419), Expect = 2e-38
 Identities = 119/303 (39%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
 Frame = +2

Query: 134  EASTLPATKHKSTQRKVHDEKSNGRLKKKFSKFPTMKMHLSSKISLGTFLSVRKKHKSRK 313
            E S+  +  + S   K  D K + + KKK  K     MHL S       LS+RKK K R+
Sbjct: 713  EFSSPSSMMNGSIHMKTLDCKPHRKFKKKNMKCRMRSMHLVSNNLFRASLSLRKKKKHRR 772

Query: 314  GKLVTT---NLIQERLVD-GNNSPDLEPSTSQKCQTTQFGGLNHSERRRESCGFKKEKCC 481
             K  T+   NL QE L++ G  S    PSTS K QTT  G  N   +R +    K +K  
Sbjct: 773  SKRHTSDIKNLTQEHLLEAGCLSVGQGPSTSDKTQTTSVGPTNRWGKRVKHGTKKGDKRT 832

Query: 482  XXXXXXXXXXGDPMANNKVERNEKTEENCAMLASNDPTQRKTASGSAANSLDDRGPCHSK 661
                         M    VE  ++  E  AMLA++   Q+ + S +              
Sbjct: 833  AGKDVKTSNSECVMDTMDVEFRDRIGEEGAMLATDKEPQKSSISVA-------------- 878

Query: 662  DSTKESLQNRSICSKDNRNDSMKNGLMSVLTRGLEETIVARWDEMGSYATHRTEQSDRGN 841
               K+    RS    D++ D M+NGLMS+LTRGL+ETIVARWDE+  + ++R  +S    
Sbjct: 879  ---KQRDAQRSDSLNDSKRDQMQNGLMSMLTRGLDETIVARWDEI-EWPSNRVMESRSVE 934

Query: 842  G-SIGYVGDEWDEEYDRGKRKKIRSFKDDFGGPNPFQEIXXXXXXXXXXRMGYSTSGNKP 1018
            G +IGYV DEWDEEYDRGKRKK+RS    FGGPNPFQEI          +   S+SGN+P
Sbjct: 935  GVTIGYVPDEWDEEYDRGKRKKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQP 994

Query: 1019 FRI 1027
            FRI
Sbjct: 995  FRI 997


>ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 955

 Score =  162 bits (409), Expect = 2e-37
 Identities = 120/303 (39%), Positives = 160/303 (52%), Gaps = 5/303 (1%)
 Frame = +2

Query: 134  EASTLPATKHKSTQRKVHDEKSNGRLKKKFSKFPTMKMHLSSKISLGTFLSVRKKHKSRK 313
            E S+ P+  + S   K  D K + +LKKK  K     MHL S       LS+RKK K R+
Sbjct: 674  EFSSPPSMMNGSIHMKTLDCKPHRKLKKKHMK---RSMHLVSNNLFRASLSLRKKKKQRR 730

Query: 314  GKLVTT---NLIQERLVD-GNNSPDLEPSTSQKCQTTQFGGLNHSERRRESCGFKKEKCC 481
             K  T+   NL QERL++ G  S D  PSTS K QT   G  N   +R +    K +K  
Sbjct: 731  SKRHTSDIKNLTQERLLEAGCLSIDQGPSTSDKTQTISVGPTNPQGKRVKHGTKKGDKRT 790

Query: 482  XXXXXXXXXXGDPMANNKVERNEKTEENCAMLASNDPTQRKTASGSAANSLDDRGPCHSK 661
                         M    +E  ++  +  AMLA++   Q+  +S S A   D +G     
Sbjct: 791  AGKDVKTSNSECLMDTMDMEIRDRIGQEGAMLATDKEPQK--SSSSVAKQWDAQG----- 843

Query: 662  DSTKESLQNRSICSKDNRNDSMKNGLMSVLTRGLEETIVARWDEMGSYATHRTEQSDRGN 841
                +SL        D++ D M+NGLMS+LTRGL++TIVARWDE+  + ++R  +S    
Sbjct: 844  ---SDSLN-------DSKRDRMQNGLMSMLTRGLDKTIVARWDEI-EWPSNRVMESRSVE 892

Query: 842  G-SIGYVGDEWDEEYDRGKRKKIRSFKDDFGGPNPFQEIXXXXXXXXXXRMGYSTSGNKP 1018
            G +IGYV DEWDEEYDRGKRKK+RS K  FG PNPFQEI          +M  S+S N+P
Sbjct: 893  GVTIGYVPDEWDEEYDRGKRKKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQP 952

Query: 1019 FRI 1027
             R+
Sbjct: 953  LRM 955


>emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
          Length = 918

 Score =  159 bits (402), Expect = 2e-36
 Identities = 119/303 (39%), Positives = 159/303 (52%), Gaps = 5/303 (1%)
 Frame = +2

Query: 134  EASTLPATKHKSTQRKVHDEKSNGRLKKKFSKFPTMKMHLSSKISLGTFLSVRKKHKSRK 313
            E S+ P+  + S   K  D K + +LKKK  K     MHL S       LS+RKK K R+
Sbjct: 637  EFSSPPSMMNGSIHMKTLDCKPHRKLKKKHMK---RSMHLVSNNLFRASLSLRKKKKQRR 693

Query: 314  GKLVTT---NLIQERLVD-GNNSPDLEPSTSQKCQTTQFGGLNHSERRRESCGFKKEKCC 481
             K  T+   NL QE L++ G  S D  PSTS K QT   G  N   +R +    K +K  
Sbjct: 694  SKRHTSDIKNLTQEPLLEAGCLSIDQGPSTSDKTQTISVGPTNPQGKRVKHGTKKGDKRT 753

Query: 482  XXXXXXXXXXGDPMANNKVERNEKTEENCAMLASNDPTQRKTASGSAANSLDDRGPCHSK 661
                         M    +E  ++  +  AMLA++   Q+  +S S A   D +G     
Sbjct: 754  AGKDVKTSNSECLMDTMDMEIRDRIGQEGAMLATDKEPQK--SSSSVAKQWDAQG----- 806

Query: 662  DSTKESLQNRSICSKDNRNDSMKNGLMSVLTRGLEETIVARWDEMGSYATHRTEQSDRGN 841
                +SL        D++ D M+NGLMS+LTRGL++TIVARWDE+  + ++R  +S    
Sbjct: 807  ---SDSLN-------DSKRDRMQNGLMSMLTRGLDKTIVARWDEI-EWPSNRVMESRSVE 855

Query: 842  G-SIGYVGDEWDEEYDRGKRKKIRSFKDDFGGPNPFQEIXXXXXXXXXXRMGYSTSGNKP 1018
            G +IGYV DEWDEEYDRGKRKK+RS K  FG PNPFQEI          +M  S+S N+P
Sbjct: 856  GVTIGYVPDEWDEEYDRGKRKKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQP 915

Query: 1019 FRI 1027
             R+
Sbjct: 916  LRM 918


>ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
            max]
          Length = 879

 Score =  138 bits (348), Expect = 3e-30
 Identities = 100/315 (31%), Positives = 148/315 (46%), Gaps = 5/315 (1%)
 Frame = +2

Query: 98   ATDINYIQATVPEASTLPATKHKSTQRKVHDEKSNGRLKKKFSKFPTMKMHLSSKISLGT 277
            A+ + Y      +   L  + + S      ++K   + KKKF ++    MHL        
Sbjct: 594  ASSMTYEDLVGSQGLVLNESVNTSLNTASLNQKPVKKSKKKFLRYQVSWMHLRPIFHYMV 653

Query: 278  FLSVRKK-HKSRKGKLVTTNLIQERLVD--GNNSPDLEPSTSQKCQTTQFGGLNHSERRR 448
            +L  RKK HK  K + +      +  +D    +S D +P             L+ SE + 
Sbjct: 654  YLGPRKKNHKRSKRRTLGMKNPNKDKMDKLAFSSEDAKPVVFPLL-------LSCSESKA 706

Query: 449  ESCGFKKEKCCXXXXXXXXXXGDPMANNKVERN--EKTEENCAMLASNDPTQRKTASGSA 622
               G++                + +  N+ E    ++ + +CA+LAS    +  + SGS 
Sbjct: 707  TKAGYRP-------GANFKSSDESLIENRAEGEFRKRIDHSCAVLASAAQIEIISGSGSI 759

Query: 623  ANSLDDRGPCHSKDSTKESLQNRSICSKDNRNDSMKNGLMSVLTRGLEETIVARWDEMGS 802
             +  + R               ++  ++D+R D M NGLMS+L+RGLEET+VARWD++  
Sbjct: 760  VSQFEAR---------------QADSAQDSRRDQMHNGLMSMLSRGLEETVVARWDDIEL 804

Query: 803  YATHRTEQSDRGNGSIGYVGDEWDEEYDRGKRKKIRSFKDDFGGPNPFQEIXXXXXXXXX 982
             ++   E  +    SIGYVGDEWDEEYD+GKRKKIR FK  FGGPN FQEI         
Sbjct: 805  PSSQHLESKNDKLVSIGYVGDEWDEEYDKGKRKKIRGFKHSFGGPNLFQEIAVEKSKFKR 864

Query: 983  XRMGYSTSGNKPFRI 1027
             +   S SGN PFRI
Sbjct: 865  AKFDQSCSGNPPFRI 879


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