BLASTX nr result

ID: Bupleurum21_contig00020911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020911
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883419.1| hypothetical protein ARALYDRAFT_898842 [Arab...   162   3e-38
ref|NP_001078202.2| uncharacterized protein [Arabidopsis thalian...   162   3e-38
ref|XP_002533787.1| conserved hypothetical protein [Ricinus comm...   159   2e-37
ref|XP_002879309.1| hypothetical protein ARALYDRAFT_344884 [Arab...   159   3e-37
ref|XP_002862787.1| hypothetical protein ARALYDRAFT_497295 [Arab...   159   3e-37

>ref|XP_002883419.1| hypothetical protein ARALYDRAFT_898842 [Arabidopsis lyrata subsp.
           lyrata] gi|297329259|gb|EFH59678.1| hypothetical protein
           ARALYDRAFT_898842 [Arabidopsis lyrata subsp. lyrata]
          Length = 195

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/112 (74%), Positives = 90/112 (80%)
 Frame = -1

Query: 418 PLNLSRCSGAHVLEFLRYLDQFGKTKVHTNNXXXXXXXXXXXXXXXPLKQAWGSLDALIG 239
           PL+LSRCSGAHVLEFLRYLDQFGKTKVHT+                PL+QAWGSLDALIG
Sbjct: 70  PLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIG 129

Query: 238 RLRAAFEEHGGSPETNPFGARAVRLYLREVRDSQAKARGIAYDXXXXXKPEP 83
           RLRAAFEE+GGSPETNPFGARAVRLYLREVRDSQAKARGI+Y+     +P P
Sbjct: 130 RLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPP 181


>ref|NP_001078202.2| uncharacterized protein [Arabidopsis thaliana]
           gi|11994313|dbj|BAB02272.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643227|gb|AEE76748.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 195

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/112 (74%), Positives = 90/112 (80%)
 Frame = -1

Query: 418 PLNLSRCSGAHVLEFLRYLDQFGKTKVHTNNXXXXXXXXXXXXXXXPLKQAWGSLDALIG 239
           PL+LSRCSGAHVLEFLRYLDQFGKTKVHT+                PL+QAWGSLDALIG
Sbjct: 70  PLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIG 129

Query: 238 RLRAAFEEHGGSPETNPFGARAVRLYLREVRDSQAKARGIAYDXXXXXKPEP 83
           RLRAAFEE+GGSPETNPFGARAVRLYLREVRDSQAKARGI+Y+     +P P
Sbjct: 130 RLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPP 181


>ref|XP_002533787.1| conserved hypothetical protein [Ricinus communis]
           gi|223526288|gb|EEF28600.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/118 (70%), Positives = 90/118 (76%)
 Frame = -1

Query: 418 PLNLSRCSGAHVLEFLRYLDQFGKTKVHTNNXXXXXXXXXXXXXXXPLKQAWGSLDALIG 239
           PL LSRCSGAHVLEFLRYLDQFGKTKVH  N               PLKQAWGSLDALIG
Sbjct: 74  PLALSRCSGAHVLEFLRYLDQFGKTKVHNQNCPFFGHPHPPAPCPCPLKQAWGSLDALIG 133

Query: 238 RLRAAFEEHGGSPETNPFGARAVRLYLREVRDSQAKARGIAYDXXXXXKPEPQKVSRV 65
           RLRAAFEE+GG PETNPFGARAVRLYLREVRD+QAKARGIAY+     KP  ++  ++
Sbjct: 134 RLRAAFEENGGLPETNPFGARAVRLYLREVRDAQAKARGIAYEKKKRKKPPQEQQQQI 191


>ref|XP_002879309.1| hypothetical protein ARALYDRAFT_344884 [Arabidopsis lyrata subsp.
           lyrata] gi|297325148|gb|EFH55568.1| hypothetical protein
           ARALYDRAFT_344884 [Arabidopsis lyrata subsp. lyrata]
          Length = 238

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/127 (66%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = -1

Query: 418 PLNLSRCSGAHVLEFLRYLDQFGKTKVHTNNXXXXXXXXXXXXXXXPLKQAWGSLDALIG 239
           PL+LSRCSGAHVLEFLRYLDQFGKTKVHTN                PL+QAWGSLDALIG
Sbjct: 76  PLSLSRCSGAHVLEFLRYLDQFGKTKVHTNVCHFYGHPNPPAPCPCPLRQAWGSLDALIG 135

Query: 238 RLRAAFEEHGGSPETNPFGARAVRLYLREVRDSQAKARGIAYDXXXXXKPEP----QKVS 71
           RLRAAFEE+GG PETNPFGARAVRLYLREVRD Q+KARG++Y+     +P P       S
Sbjct: 136 RLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPPSSASSSS 195

Query: 70  RVNHHQE 50
            V  HQ+
Sbjct: 196 AVASHQQ 202


>ref|XP_002862787.1| hypothetical protein ARALYDRAFT_497295 [Arabidopsis lyrata subsp.
           lyrata] gi|297308511|gb|EFH39045.1| hypothetical protein
           ARALYDRAFT_497295 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/127 (66%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = -1

Query: 418 PLNLSRCSGAHVLEFLRYLDQFGKTKVHTNNXXXXXXXXXXXXXXXPLKQAWGSLDALIG 239
           PL+LSRCSGAHVLEFLRYLDQFGKTKVHTN                PL+QAWGSLDALIG
Sbjct: 76  PLSLSRCSGAHVLEFLRYLDQFGKTKVHTNVCHFYGHPNPPAPCPCPLRQAWGSLDALIG 135

Query: 238 RLRAAFEEHGGSPETNPFGARAVRLYLREVRDSQAKARGIAYDXXXXXKPEP----QKVS 71
           RLRAAFEE+GG PETNPFGARAVRLYLREVRD Q+KARG++Y+     +P P       S
Sbjct: 136 RLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPPSSASSSS 195

Query: 70  RVNHHQE 50
            V  HQ+
Sbjct: 196 AVASHQQ 202


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