BLASTX nr result

ID: Bupleurum21_contig00020908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020908
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    69   2e-09
ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|3554...    59   2e-06
ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago ...    59   2e-06

>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
 Frame = -1

Query: 928 YPKFIDHVFAHRNDQSCVHELELYPQVSPDLRLMKKYVKYSILHRVEKLNFKT---LSHC 758
           + KF+ HV +HR+D + +  L+ +     +  L+KK VKY++ H V++L           
Sbjct: 67  FTKFVSHVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQISVDADFQCF 126

Query: 757 PLSIFSSNSLTKLKLAMKFKPDNVMEPECWSLPNLTTLHLTCYDY------------KFR 614
           P   FS N+LT LKL++ F   N + P   +LP LT+L L  + +            KF+
Sbjct: 127 PPCFFSCNTLTSLKLSLGF---NTLFPNFLNLPALTSLSLRSFVFHNSDDGRVEPFSKFK 183

Query: 613 ELP----EWCLICLPNLKTLCLGKFRLPEI----------FSFPGLTKLCLDNCILPQKI 476
            L     + C++C  + + LC+   +L  +           S P L       C +P KI
Sbjct: 184 MLNSLIIDSCMVC--DAQNLCISSPKLVSLTILQSYFGIELSVPSLHTFTFTGCTIPNKI 241

Query: 475 W 473
           +
Sbjct: 242 Y 242


>ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|355487963|gb|AES69166.1|
           F-box family-9 [Medicago truncatula]
          Length = 383

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -1

Query: 952 HYCGNKLVYPKFIDHVFAHRNDQSCVHELELYPQVSPDLRLMKKYVKYSILHRVEKLNFK 773
           H+  N   + KF+  + + RND + +H L+ + +   +L ++++ +KY+  H V++L   
Sbjct: 63  HFKKNPKGFTKFVSQILSLRNDSTALHTLDFHCRGRLELHILERILKYAFSHNVQRLGVD 122

Query: 772 ---TLSHCPLSIFSSNSLTKLKLAMKFKPDNVMEPECWSLPNLTTLHL 638
               +   PLS FS ++LT L L + F     + P+   LP LT L L
Sbjct: 123 LSCNIPQFPLSFFSCHTLTSLDLRIHFFTLTNLFPDSLDLPALTNLSL 170


>ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago truncatula]
           gi|355516214|gb|AES97837.1| hypothetical protein
           MTR_5g060750 [Medicago truncatula]
          Length = 370

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = -1

Query: 955 IHYCGNKLVYPKFIDHVFAHRNDQSCVHELELYPQVSPDLRLMKKYVKYSILHRVEKLNF 776
           IH+  N   + KF+ HV + RND + +  L+ +   + D RL+K+ +KY+  H V++L  
Sbjct: 65  IHFPKNLKGFTKFVSHVLSLRNDTTSLLALDFHRSGTMDPRLLKRILKYAFSHNVQQLQV 124

Query: 775 KTLSHCPL---SIFSSNSLTKLKLAMKFKPDNVMEPECWSLPNLTTLHL 638
                 P    S FS ++LT LKL + +     + P   +LP +T L L
Sbjct: 125 DVKCVNPQFSPSFFSCHTLTTLKLKIDYYSHQNLFPTSLNLPQITNLSL 173


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