BLASTX nr result

ID: Bupleurum21_contig00020904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020904
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21316.3| unnamed protein product [Vitis vinifera]              315   8e-84
ref|XP_003553959.1| PREDICTED: uncharacterized protein LOC100806...   309   8e-82
ref|XP_002512894.1| conserved hypothetical protein [Ricinus comm...   308   2e-81
ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249...   302   7e-80
ref|XP_003622057.1| Regulation of nuclear pre-mRNA domain-contai...   301   2e-79

>emb|CBI21316.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  315 bits (808), Expect = 8e-84
 Identities = 178/325 (54%), Positives = 219/325 (67%), Gaps = 7/325 (2%)
 Frame = -2

Query: 972  EFWKVLPNALRDVIETGEEFERNAALRLINIWEERKVFGSRGQLLKEELVGKKPDTNNKH 793
            EFWKVLP+ALRDV+E G+EF RNA LRLI IWEERKVFGSRGQ+LKEE  G++ + +N++
Sbjct: 81   EFWKVLPDALRDVMENGDEFGRNAVLRLIGIWEERKVFGSRGQILKEEFGGRQLENSNRN 140

Query: 792  VNTPGLKLKNSAGNALDKIVSGYQAVYGSQVDEDAVLSKCRNAVSCVQKVDKELGGDIES 613
                G KLK SAGN L+KIVSGYQ +YG Q+DED +L KC NA+S V+K DK + G I S
Sbjct: 141  GKHLGFKLKQSAGNTLEKIVSGYQVIYGGQLDEDVILRKCTNAISYVEKADKGIDGGINS 200

Query: 612  AQFNGSGIVGEIKEQHTILTDCIEQLITMESYRENLVSHLRQALEEQEQKLGQVRNQRXX 433
            AQ NGSG V E++ QHTIL DCIEQL  +ES R +LVS+LR+AL+EQE KL QVRNQ   
Sbjct: 201  AQQNGSGFVEELQGQHTILRDCIEQLTLVESSRASLVSNLREALQEQEFKLDQVRNQLQA 260

Query: 432  XXXXXXXXXXXXXQFVNM-NTVQSLADQDKKETQTQ----SYTSGNEEQTAPVMYTQQIA 268
                         + +   N  Q LA+Q  KET+T     S+  G  EQ+APVM+T+Q++
Sbjct: 261  AQFQAEQAGNMCRRLLKCNNNTQLLAEQSLKETRTTEALLSFVPGTVEQSAPVMFTRQVS 320

Query: 267  SAKKPDHF-EDP-XXXXXXXXXXXXXXXXXAQMLSYVLSSLASEGVISSAMNESSIDCPP 94
              +KP H  EDP                  AQML++VLSSLASEGVI +   ESS D P 
Sbjct: 321  FPEKPGHIEEDPRKSAAAAVAAKLTASTSSAQMLTFVLSSLASEGVIGNPTKESSGDYPA 380

Query: 93   EKRTKIENNHAAYIPSQNPQGPQPP 19
            EKRTK+EN+ +AY P QNPQ  QPP
Sbjct: 381  EKRTKLENDQSAYTP-QNPQPSQPP 404


>ref|XP_003553959.1| PREDICTED: uncharacterized protein LOC100806108 [Glycine max]
          Length = 526

 Score =  309 bits (791), Expect = 8e-82
 Identities = 175/330 (53%), Positives = 215/330 (65%), Gaps = 11/330 (3%)
 Frame = -2

Query: 972  EFWKVLPNALRDVIETGEEFERNAALRLINIWEERKVFGSRGQLLKEELVGKKPDTNNKH 793
            EFWKVLP ALRDVI+ G++F RNAALRLI IWEERKVFGSRGQ+LKEE VG   + N++ 
Sbjct: 81   EFWKVLPEALRDVIQNGDDFARNAALRLIGIWEERKVFGSRGQILKEEFVGSHVENNSRD 140

Query: 792  VNTPGLKL----KNSAGNALDKIVSGYQAVYGSQVDEDAVLSKCRNAVSCVQKVDKELGG 625
            V    +KL    + S GNAL+KI SG+  VYG Q DEDAVLSKCRNA++C+ K +KE   
Sbjct: 141  VKPTNMKLVIVSRPSVGNALEKIASGFHVVYGGQTDEDAVLSKCRNAINCLDKAEKE--- 197

Query: 624  DIESAQFNGSGIVGEIKEQHTILTDCIEQLITMESYRENLVSHLRQALEEQEQKLGQVRN 445
             I S QF GS +V E++  + IL DCIEQL  +ES R +LVS LR+ALE+QE KLGQVR+
Sbjct: 198  -IVSGQFGGSALVDELQGHNAILKDCIEQLTAIESSRTSLVSLLREALEDQEFKLGQVRS 256

Query: 444  QRXXXXXXXXXXXXXXXQFVNMNTVQSLADQDKKETQTQS-----YTSGNEEQTAPVMYT 280
            Q                Q +N+N + SLA+Q  KE QT         S   EQ+AP+MYT
Sbjct: 257  QIQAAHVQSERATNTCQQLLNVNNIPSLAEQSSKEIQTSMTPASFNISSEREQSAPLMYT 316

Query: 279  QQIASAKKPDHF-EDP-XXXXXXXXXXXXXXXXXAQMLSYVLSSLASEGVISSAMNESSI 106
             Q++ ++K  H  EDP                  AQMLSYVLSSLASEGVI + M ESS 
Sbjct: 317  PQVSFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPMKESSA 376

Query: 105  DCPPEKRTKIENNHAAYIPSQNPQGPQPPF 16
            D   EKRTK+EN+  +++PSQNPQ P PPF
Sbjct: 377  DYHSEKRTKLENDQPSFVPSQNPQQPLPPF 406


>ref|XP_002512894.1| conserved hypothetical protein [Ricinus communis]
            gi|223547905|gb|EEF49397.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 522

 Score =  308 bits (788), Expect = 2e-81
 Identities = 172/328 (52%), Positives = 216/328 (65%), Gaps = 7/328 (2%)
 Frame = -2

Query: 972  EFWKVLPNALRDVIETGEEFERNAALRLINIWEERKVFGSRGQLLKEELVGKKPDTNNKH 793
            EFWKVLP ALRDVIE G+E  RNAALRLI+IWE+RKVFGSRGQ+LKEELVGK  + +N++
Sbjct: 81   EFWKVLPEALRDVIENGDEVGRNAALRLISIWEDRKVFGSRGQILKEELVGKHSENSNRN 140

Query: 792  VNTPGLKLKNSAGNALDKIVSGYQAVYGSQVDEDAVLSKCRNAVSCVQKVDKELGGDIES 613
                GLKLK  AG+ LDKI+SGYQ + G  VDE+  +SKCR+A+SC++K +KE+GG  + 
Sbjct: 141  GKHLGLKLKQPAGSTLDKIISGYQVLQGGHVDEEVTISKCRSAISCLEKAEKEIGGSTDL 200

Query: 612  AQFNGSGIVGEIKEQHTILTDCIEQLITMESYRENLVSHLRQALEEQEQKLGQVRNQRXX 433
             +F+G+  V E++ QHTIL D IEQL  +ES R +LVSHLR+AL EQE KL QVRNQ   
Sbjct: 201  GKFHGTPFVEELQGQHTILRDSIEQLTAIESSRASLVSHLREALHEQESKLEQVRNQLQA 260

Query: 432  XXXXXXXXXXXXXQFVNMNTVQSLADQDKKETQT----QSYTSGNEEQTAPVMYTQQIAS 265
                         QF++ N VQ +A +  KE       QS+  GN EQ+AP MY +Q++ 
Sbjct: 261  AQSQSEHAGNVFQQFLHSNNVQLVAQESSKEANASSAPQSFIPGNREQSAPAMYIRQVSF 320

Query: 264  AKKPDHF-EDP-XXXXXXXXXXXXXXXXXAQMLSYVLSSLASEGVISSAMNESSIDCPPE 91
             +K  H  EDP                  AQMLSYVLSSLASEGVI + + E + + P E
Sbjct: 321  PEKTGHVQEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPIKEPASEYPSE 380

Query: 90   KRTKIENNHAAYIPSQNP-QGPQPPFLH 10
            KR K EN+   YIP+QNP Q P PPF H
Sbjct: 381  KRAKHENDQ-PYIPTQNPLQQPLPPFQH 407


>ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249768 [Vitis vinifera]
          Length = 530

 Score =  302 bits (774), Expect = 7e-80
 Identities = 175/326 (53%), Positives = 218/326 (66%), Gaps = 13/326 (3%)
 Frame = -2

Query: 972  EFWKVLPNALRDVIETGEEFERNAALRLINIWEERKVFGSRGQLLKEELVGKKPDTNNKH 793
            EFWKVLP+ALRDV+E G+EF RNA LRLI IWEERKVFGSRGQ+LKEE  G++ + +N++
Sbjct: 81   EFWKVLPDALRDVMENGDEFGRNAVLRLIGIWEERKVFGSRGQILKEEFGGRQLENSNRN 140

Query: 792  --VNTP----GLKLKNSAGNALDKIVSGYQAVYGSQVDEDAVLSKCRNAVSCVQKVDKEL 631
              +NT      +K K SAGN L+KIVSGYQ +YG Q+DED +L KC NA+S V+K DK +
Sbjct: 141  GKINTVPYFFSIKQKQSAGNTLEKIVSGYQVIYGGQLDEDVILRKCTNAISYVEKADKGI 200

Query: 630  GGDIESAQFNGSGIVGEIKEQHTILTDCIEQLITMESYRENLVSHLRQALEEQEQKLGQV 451
             G I SAQ NGSG V E++ QHTIL DCIEQL  +ES R +LVS+LR+AL+EQE KL QV
Sbjct: 201  DGGINSAQQNGSGFVEELQGQHTILRDCIEQLTLVESSRASLVSNLREALQEQEFKLDQV 260

Query: 450  RNQRXXXXXXXXXXXXXXXQFVNM-NTVQSLADQDKKETQTQ----SYTSGNEEQTAPVM 286
            RNQ                + +   N  Q LA+Q  KET+T     S+  G  EQ+APVM
Sbjct: 261  RNQLQAAQFQAEQAGNMCRRLLKCNNNTQLLAEQSLKETRTTEALLSFVPGTVEQSAPVM 320

Query: 285  YTQQIASAKKPDHF-EDP-XXXXXXXXXXXXXXXXXAQMLSYVLSSLASEGVISSAMNES 112
            +T+Q++  +KP H  EDP                  AQML++VLSSLASEGVI +   ES
Sbjct: 321  FTRQVSFPEKPGHIEEDPRKSAAAAVAAKLTASTSSAQMLTFVLSSLASEGVIGNPTKES 380

Query: 111  SIDCPPEKRTKIENNHAAYIPSQNPQ 34
            S D P EKRTK+EN+ +AY P QNPQ
Sbjct: 381  SGDYPAEKRTKLENDQSAYTP-QNPQ 405


>ref|XP_003622057.1| Regulation of nuclear pre-mRNA domain-containing protein 1B [Medicago
            truncatula] gi|355497072|gb|AES78275.1| Regulation of
            nuclear pre-mRNA domain-containing protein 1B [Medicago
            truncatula]
          Length = 527

 Score =  301 bits (771), Expect = 2e-79
 Identities = 172/335 (51%), Positives = 220/335 (65%), Gaps = 16/335 (4%)
 Frame = -2

Query: 972  EFWKVLPNALRDVIETGEEFERNAALRLINIWEERKVFGSRGQLLKEELVGKKPDTNNK- 796
            EFWKVLP++LRDVI+ G++  RN A RLI IW+ERKVFGSRGQ+LKEE VG+  + NN+ 
Sbjct: 81   EFWKVLPDSLRDVIQNGDDNARNQARRLIGIWDERKVFGSRGQILKEEFVGRHAENNNRD 140

Query: 795  ---------HVNTPGLKLKNSAGNALDKIVSGYQAVYGSQVDEDAVLSKCRNAVSCVQKV 643
                     +V    +KL+ SAGNALD+IVSGYQ +YG Q DEDAVLSKC+NA+S ++KV
Sbjct: 141  VKPMNAKPTNVKPMNVKLRPSAGNALDRIVSGYQYIYGGQTDEDAVLSKCQNAISSLEKV 200

Query: 642  DKELGGDIESAQFNGSGIVGEIKEQHTILTDCIEQLITMESYRENLVSHLRQALEEQEQK 463
            DKE+  D  S +F+G  +V E++  + IL DCI+QL  +ES R +LVSHLR+AL++QE K
Sbjct: 201  DKEIDHDSNSGKFHGPAVVNELQGHNGILKDCIDQLTAIESSRASLVSHLREALQDQEFK 260

Query: 462  LGQVRNQRXXXXXXXXXXXXXXXQFVNMNTVQSLADQDKKETQTQ----SYTSGNEEQTA 295
            LGQVR+Q                Q +N N +QSL +Q  KE QT     S+ SG  EQ+A
Sbjct: 261  LGQVRSQIQAARVQWEHSNNTCQQLLNGNNIQSLVEQSSKEIQTSMTPASFISGG-EQSA 319

Query: 294  PVMYTQQIASAKKPDHF-EDP-XXXXXXXXXXXXXXXXXAQMLSYVLSSLASEGVISSAM 121
            P+MY+ Q+  ++   H  EDP                  AQMLSYVLSSLASEGVI + M
Sbjct: 320  PLMYSPQVMFSQNSGHSEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQM 379

Query: 120  NESSIDCPPEKRTKIENNHAAYIPSQNPQGPQPPF 16
              SS D   EKRTK+EN+  +Y+PSQNPQ P PPF
Sbjct: 380  TGSSADYHAEKRTKLENDQ-SYVPSQNPQQPLPPF 413


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