BLASTX nr result

ID: Bupleurum21_contig00020902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020902
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent R...   249   3e-64
ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent R...   249   3e-64
ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ...   246   2e-63
ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|2...   242   4e-62
ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R...   241   1e-61

>ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cucumis sativus]
          Length = 789

 Score =  249 bits (636), Expect = 3e-64
 Identities = 129/166 (77%), Positives = 144/166 (86%)
 Frame = +2

Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298
           + PL VSS +EL           SGGFESLGLS +VFRG+KRKGY+VPTPIQRKTMPLIL
Sbjct: 5   DEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLIL 64

Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478
           SGADVVAMARTGSGKTAAFLVPM E+L++H    GG RALILSPTRDLALQTLKF +ELG
Sbjct: 65  SGADVVAMARTGSGKTAAFLVPMLERLKQH-EPQGGVRALILSPTRDLALQTLKFTKELG 123

Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616
           +FTDLRISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+D
Sbjct: 124 KFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDD 169


>ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cucumis sativus]
          Length = 789

 Score =  249 bits (636), Expect = 3e-64
 Identities = 129/166 (77%), Positives = 144/166 (86%)
 Frame = +2

Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298
           + PL VSS +EL           SGGFESLGLS +VFRG+KRKGY+VPTPIQRKTMPLIL
Sbjct: 5   DEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLIL 64

Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478
           SGADVVAMARTGSGKTAAFLVPM E+L++H    GG RALILSPTRDLALQTLKF +ELG
Sbjct: 65  SGADVVAMARTGSGKTAAFLVPMLERLKQH-EPQGGVRALILSPTRDLALQTLKFTKELG 123

Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616
           +FTDLRISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+D
Sbjct: 124 KFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDD 169


>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 789

 Score =  246 bits (628), Expect = 2e-63
 Identities = 128/166 (77%), Positives = 144/166 (86%)
 Frame = +2

Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298
           +A  LVSS +EL           SGGFESL LS +V+ GVKRKGY+VPTPIQRKTMP+IL
Sbjct: 3   KAEPLVSSKAELKHKQNLKKKAKSGGFESLNLSPNVYNGVKRKGYRVPTPIQRKTMPIIL 62

Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478
           SG+DVVAMARTGSGKTAAFL+PM E+L++H+++ GG RALILSPTRDLALQTLKF +ELG
Sbjct: 63  SGSDVVAMARTGSGKTAAFLIPMLERLKQHVSQ-GGARALILSPTRDLALQTLKFTKELG 121

Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616
           RFTDLR SLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEV+D
Sbjct: 122 RFTDLRASLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDD 167


>ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|222856919|gb|EEE94466.1|
           predicted protein [Populus trichocarpa]
          Length = 510

 Score =  242 bits (617), Expect = 4e-62
 Identities = 126/162 (77%), Positives = 141/162 (87%)
 Frame = +2

Query: 131 LVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLILSGAD 310
           LVSS++EL           S GFESL LS +VFRG+KRKGY+VPTPIQRKTMPLIL+G D
Sbjct: 5   LVSSMAELKRKQQVKKKSKSCGFESLNLSPNVFRGIKRKGYRVPTPIQRKTMPLILAGID 64

Query: 311 VVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELGRFTD 490
           VVAMARTGSGKTAAFL+PM EKL++HL +SG  RALILSPTRDLALQTLKF +ELGRFTD
Sbjct: 65  VVAMARTGSGKTAAFLLPMLEKLKQHLPQSG-VRALILSPTRDLALQTLKFTKELGRFTD 123

Query: 491 LRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616
           LRISLLVGGD MESQFE+L+QNPDIIIATPGRLMHHLSE++D
Sbjct: 124 LRISLLVGGDRMESQFEDLSQNPDIIIATPGRLMHHLSEIDD 165


>ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Vitis vinifera]
          Length = 784

 Score =  241 bits (614), Expect = 1e-61
 Identities = 125/163 (76%), Positives = 141/163 (86%)
 Frame = +2

Query: 128 LLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLILSGA 307
           L VSS +EL           SGGFESLGLS +V+R +KRKGY+VPTPIQRKTMPLILSG 
Sbjct: 6   LHVSSKAELKRREKQKKKARSGGFESLGLSPNVYRAIKRKGYRVPTPIQRKTMPLILSGC 65

Query: 308 DVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELGRFT 487
           DVVAMARTGSGKTAAFL+PM E+L++H+ ++G  RALILSPTRDLALQTLKF +EL R+T
Sbjct: 66  DVVAMARTGSGKTAAFLIPMLERLKQHVPQTG-VRALILSPTRDLALQTLKFTKELARYT 124

Query: 488 DLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616
           D+RISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEV+D
Sbjct: 125 DVRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDD 167


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