BLASTX nr result
ID: Bupleurum21_contig00020902
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00020902 (618 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent R... 249 3e-64 ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent R... 249 3e-64 ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ... 246 2e-63 ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|2... 242 4e-62 ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R... 241 1e-61 >ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Cucumis sativus] Length = 789 Score = 249 bits (636), Expect = 3e-64 Identities = 129/166 (77%), Positives = 144/166 (86%) Frame = +2 Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298 + PL VSS +EL SGGFESLGLS +VFRG+KRKGY+VPTPIQRKTMPLIL Sbjct: 5 DEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLIL 64 Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478 SGADVVAMARTGSGKTAAFLVPM E+L++H GG RALILSPTRDLALQTLKF +ELG Sbjct: 65 SGADVVAMARTGSGKTAAFLVPMLERLKQH-EPQGGVRALILSPTRDLALQTLKFTKELG 123 Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616 +FTDLRISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+D Sbjct: 124 KFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDD 169 >ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Cucumis sativus] Length = 789 Score = 249 bits (636), Expect = 3e-64 Identities = 129/166 (77%), Positives = 144/166 (86%) Frame = +2 Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298 + PL VSS +EL SGGFESLGLS +VFRG+KRKGY+VPTPIQRKTMPLIL Sbjct: 5 DEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLIL 64 Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478 SGADVVAMARTGSGKTAAFLVPM E+L++H GG RALILSPTRDLALQTLKF +ELG Sbjct: 65 SGADVVAMARTGSGKTAAFLVPMLERLKQH-EPQGGVRALILSPTRDLALQTLKFTKELG 123 Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616 +FTDLRISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+D Sbjct: 124 KFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDD 169 >ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 789 Score = 246 bits (628), Expect = 2e-63 Identities = 128/166 (77%), Positives = 144/166 (86%) Frame = +2 Query: 119 EAPLLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLIL 298 +A LVSS +EL SGGFESL LS +V+ GVKRKGY+VPTPIQRKTMP+IL Sbjct: 3 KAEPLVSSKAELKHKQNLKKKAKSGGFESLNLSPNVYNGVKRKGYRVPTPIQRKTMPIIL 62 Query: 299 SGADVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELG 478 SG+DVVAMARTGSGKTAAFL+PM E+L++H+++ GG RALILSPTRDLALQTLKF +ELG Sbjct: 63 SGSDVVAMARTGSGKTAAFLIPMLERLKQHVSQ-GGARALILSPTRDLALQTLKFTKELG 121 Query: 479 RFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616 RFTDLR SLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEV+D Sbjct: 122 RFTDLRASLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDD 167 >ref|XP_002307470.1| predicted protein [Populus trichocarpa] gi|222856919|gb|EEE94466.1| predicted protein [Populus trichocarpa] Length = 510 Score = 242 bits (617), Expect = 4e-62 Identities = 126/162 (77%), Positives = 141/162 (87%) Frame = +2 Query: 131 LVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLILSGAD 310 LVSS++EL S GFESL LS +VFRG+KRKGY+VPTPIQRKTMPLIL+G D Sbjct: 5 LVSSMAELKRKQQVKKKSKSCGFESLNLSPNVFRGIKRKGYRVPTPIQRKTMPLILAGID 64 Query: 311 VVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELGRFTD 490 VVAMARTGSGKTAAFL+PM EKL++HL +SG RALILSPTRDLALQTLKF +ELGRFTD Sbjct: 65 VVAMARTGSGKTAAFLLPMLEKLKQHLPQSG-VRALILSPTRDLALQTLKFTKELGRFTD 123 Query: 491 LRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616 LRISLLVGGD MESQFE+L+QNPDIIIATPGRLMHHLSE++D Sbjct: 124 LRISLLVGGDRMESQFEDLSQNPDIIIATPGRLMHHLSEIDD 165 >ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Vitis vinifera] Length = 784 Score = 241 bits (614), Expect = 1e-61 Identities = 125/163 (76%), Positives = 141/163 (86%) Frame = +2 Query: 128 LLVSSVSELXXXXXXXXXXXSGGFESLGLSLDVFRGVKRKGYKVPTPIQRKTMPLILSGA 307 L VSS +EL SGGFESLGLS +V+R +KRKGY+VPTPIQRKTMPLILSG Sbjct: 6 LHVSSKAELKRREKQKKKARSGGFESLGLSPNVYRAIKRKGYRVPTPIQRKTMPLILSGC 65 Query: 308 DVVAMARTGSGKTAAFLVPMFEKLRKHLTESGGPRALILSPTRDLALQTLKFAQELGRFT 487 DVVAMARTGSGKTAAFL+PM E+L++H+ ++G RALILSPTRDLALQTLKF +EL R+T Sbjct: 66 DVVAMARTGSGKTAAFLIPMLERLKQHVPQTG-VRALILSPTRDLALQTLKFTKELARYT 124 Query: 488 DLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVED 616 D+RISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEV+D Sbjct: 125 DVRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDD 167