BLASTX nr result

ID: Bupleurum21_contig00020883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020883
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272265.1| PREDICTED: uncharacterized protein LOC100260...    58   9e-07
ref|XP_002511844.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_002320786.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002272265.1| PREDICTED: uncharacterized protein LOC100260277 [Vitis vinifera]
           gi|297745265|emb|CBI40345.3| unnamed protein product
           [Vitis vinifera]
          Length = 81

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/82 (42%), Positives = 42/82 (51%)
 Frame = +2

Query: 89  MSKKNNLGRRKRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGFTVGKK 268
           MSKKNNL RRK+QY                                    GA GF VGK+
Sbjct: 1   MSKKNNLARRKKQYEFDLRREKQEKEKKTMKLSAKKNKMKVDTRSKKKK-GAGGFQVGKR 59

Query: 269 KLKTRMTPLAKAKAAQAMEVDK 334
           K+KT++T LAKAKAAQAME++K
Sbjct: 60  KVKTKLTALAKAKAAQAMEIEK 81


>ref|XP_002511844.1| conserved hypothetical protein [Ricinus communis]
           gi|223549024|gb|EEF50513.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/79 (43%), Positives = 39/79 (49%)
 Frame = +2

Query: 89  MSKKNNLGRRKRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGFTVGKK 268
           MSKKNNL RRKRQ+                                    GASGF+V KK
Sbjct: 1   MSKKNNLARRKRQHEFELQKEKEQKEKNEKKLQAKKNKMKVDNTNKMKKKGASGFSVKKK 60

Query: 269 KLKTRMTPLAKAKAAQAME 325
           K+KT++T L KAKAAQAME
Sbjct: 61  KVKTKLTALTKAKAAQAME 79


>ref|XP_002320786.1| predicted protein [Populus trichocarpa] gi|222861559|gb|EEE99101.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/82 (40%), Positives = 41/82 (50%)
 Frame = +2

Query: 89  MSKKNNLGRRKRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGFTVGKK 268
           MSKKN+L RRKRQ+                                    G SGF VGK+
Sbjct: 1   MSKKNDLARRKRQHEFELKREKELKEKQKKKLQAKKNKMKVDGKDKKNKKGGSGFQVGKR 60

Query: 269 KLKTRMTPLAKAKAAQAMEVDK 334
           K+KT+++ LAKAKA QAME+DK
Sbjct: 61  KVKTKLSALAKAKADQAMELDK 82


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