BLASTX nr result

ID: Bupleurum21_contig00020870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020870
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16830.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   146   1e-33
ref|XP_002515044.1| trytophan synthase alpha subunit, putative [...   122   4e-26
ref|XP_002314578.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002875309.1| hypothetical protein ARALYDRAFT_484377 [Arab...   103   1e-20

>emb|CBI16830.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  146 bits (369), Expect = 1e-33
 Identities = 80/143 (55%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 NMKLQYINKQSSLSATLRKEFHSGPSSNNLQVANKLNLCDEEFISKLLDRRWALVSPDTK 247
           NMKL  + +   LS+ L  +F S  S    Q  ++L LC EEF++KLLDRRW L++P+T 
Sbjct: 10  NMKLHRLPRHPPLSS-LGNDFRSTTS----QGVSELKLCGEEFVTKLLDRRWTLLNPNTT 64

Query: 246 VHMIKVSDH-HKNQQQQAGCFGNVSFTNNPNPLLGDGMIENRNNQPSFYVVRDDLLHPLV 70
           +H IK+S   H N     G  GN+SF+++ +P LG G  +N N  PSFYVVRDDLLHPLV
Sbjct: 65  IHQIKLSTMLHGN-----GLLGNISFSSDTHPSLGHGTADNCNQDPSFYVVRDDLLHPLV 119

Query: 69  NGNKARKLDGLLPLLEDNSVTDV 1
           NGNKARKLDGLLPL+ED+SVTDV
Sbjct: 120 NGNKARKLDGLLPLVEDHSVTDV 142


>ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Vitis vinifera]
          Length = 455

 Score =  146 bits (369), Expect = 1e-33
 Identities = 80/143 (55%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 NMKLQYINKQSSLSATLRKEFHSGPSSNNLQVANKLNLCDEEFISKLLDRRWALVSPDTK 247
           NMKL  + +   LS+ L  +F S  S    Q  ++L LC EEF++KLLDRRW L++P+T 
Sbjct: 10  NMKLHRLPRHPPLSS-LGNDFRSTTS----QGVSELKLCGEEFVTKLLDRRWTLLNPNTT 64

Query: 246 VHMIKVSDH-HKNQQQQAGCFGNVSFTNNPNPLLGDGMIENRNNQPSFYVVRDDLLHPLV 70
           +H IK+S   H N     G  GN+SF+++ +P LG G  +N N  PSFYVVRDDLLHPLV
Sbjct: 65  IHQIKLSTMLHGN-----GLLGNISFSSDTHPSLGHGTADNCNQDPSFYVVRDDLLHPLV 119

Query: 69  NGNKARKLDGLLPLLEDNSVTDV 1
           NGNKARKLDGLLPL+ED+SVTDV
Sbjct: 120 NGNKARKLDGLLPLVEDHSVTDV 142


>ref|XP_002515044.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223546095|gb|EEF47598.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 442

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/141 (45%), Positives = 99/141 (70%)
 Frame = -3

Query: 423 MKLQYINKQSSLSATLRKEFHSGPSSNNLQVANKLNLCDEEFISKLLDRRWALVSPDTKV 244
           MKLQ  + ++++++ ++  +HSG      Q  +++ L  E+ +S LL+R+W L  P+T++
Sbjct: 1   MKLQRWSCKTAITS-MKCSYHSGS-----QGLSEVKLSSEKLMSNLLNRKWMLQLPNTEI 54

Query: 243 HMIKVSDHHKNQQQQAGCFGNVSFTNNPNPLLGDGMIENRNNQPSFYVVRDDLLHPLVNG 64
           H I++S      ++  G FG++SF N+ +P  GD M++  +  PSFY+VRDDLLHPLVNG
Sbjct: 55  HQIRLSLAQGLHRE--GLFGDMSFLNDSHPFFGDHMMKKDSRHPSFYIVRDDLLHPLVNG 112

Query: 63  NKARKLDGLLPLLEDNSVTDV 1
           NKARKLDGL+PLL ++SVTDV
Sbjct: 113 NKARKLDGLIPLLVNHSVTDV 133


>ref|XP_002314578.1| predicted protein [Populus trichocarpa] gi|222863618|gb|EEF00749.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/91 (59%), Positives = 63/91 (69%)
 Frame = -3

Query: 273 WALVSPDTKVHMIKVSDHHKNQQQQAGCFGNVSFTNNPNPLLGDGMIENRNNQPSFYVVR 94
           W L  PDT++H IK+S      + + G  GN+SF NN  P  GD ++E  +  P FYVVR
Sbjct: 1   WMLHIPDTEIHQIKLS--LSQGRNRDGPSGNLSFLNNTKPYFGDDLMEKGSEDPFFYVVR 58

Query: 93  DDLLHPLVNGNKARKLDGLLPLLEDNSVTDV 1
           DDLLHPLVNGNKARKLD LLPLL D SVTDV
Sbjct: 59  DDLLHPLVNGNKARKLDALLPLLVDYSVTDV 89


>ref|XP_002875309.1| hypothetical protein ARALYDRAFT_484377 [Arabidopsis lyrata subsp.
           lyrata] gi|297321147|gb|EFH51568.1| hypothetical protein
           ARALYDRAFT_484377 [Arabidopsis lyrata subsp. lyrata]
          Length = 408

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/122 (49%), Positives = 76/122 (62%)
 Frame = -3

Query: 366 FHSGPSSNNLQVANKLNLCDEEFISKLLDRRWALVSPDTKVHMIKVSDHHKNQQQQAGCF 187
           FHS  SS  + ++    L   +F+SKLL+R+W L SP T +  I VS             
Sbjct: 20  FHS--SSQGITISE---LDSRQFLSKLLERKWGLQSPATPIQQISVSS--------VKGI 66

Query: 186 GNVSFTNNPNPLLGDGMIENRNNQPSFYVVRDDLLHPLVNGNKARKLDGLLPLLEDNSVT 7
              SF NN  P LGD M +++ +  SFY++RDDLLHPLVNGNKARKLD LLPLLED+ VT
Sbjct: 67  DKFSFLNNTRPHLGDEMSKSKQDS-SFYILRDDLLHPLVNGNKARKLDALLPLLEDHKVT 125

Query: 6   DV 1
           D+
Sbjct: 126 DL 127


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