BLASTX nr result

ID: Bupleurum21_contig00020866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020866
         (1840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527327.1| F-box/LRR-repeat protein, putative [Ricinus ...   385   e-104
ref|XP_002273285.1| PREDICTED: EIN3-binding F-box protein 1-like...   376   e-102
ref|XP_002304715.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
emb|CAN81984.1| hypothetical protein VITISV_001566 [Vitis vinifera]   363   6e-98
ref|NP_565242.1| leucine-rich repeats-containing protein [Arabid...   338   2e-90

>ref|XP_002527327.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223533327|gb|EEF35079.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 578

 Score =  385 bits (990), Expect = e-104
 Identities = 236/578 (40%), Positives = 335/578 (57%), Gaps = 23/578 (3%)
 Frame = -3

Query: 1667 MTKICQDLPEECWELIVNKLDHYRHFESLSLVSKRFLHLTNRLRLKFTVTHQGIRIHGTI 1488
            MT+   DLP+ECWELI+N LDH+RHFESLSLVS RF  +TN LR   T++   +     +
Sbjct: 1    MTEKSIDLPQECWELILNSLDHHRHFESLSLVSTRFFSMTNHLRQNLTISSHTLPF---L 57

Query: 1487 SKFLNRFDQVKTLDLSKF-KGNLDLVLNDDVFSSVNLEYLDVSNQESLPVLVEN-----M 1326
            S  LNRF  +K++ +S+  K +L+ +L+    S ++L+ L+  NQ   P L        M
Sbjct: 58   SHLLNRFPNLKSIQISQLSKDDLNSLLHQLSKSELDLDSLNFENQTRFPHLGLREFGLKM 117

Query: 1325 KCLKVFKCSNVSRLNDGDLQSISVMMPFLEELDISYPN-----NTKYYVDLDLDEFTITD 1161
            + L+   CS +S L D DL  I    P LE+LDIS+P      N    +DL      +TD
Sbjct: 118  RNLRKLHCSKISGLQDSDLFLIGSSFPLLEDLDISFPLYDSRFNPNGSLDLQCFSGIVTD 177

Query: 1160 VGIEALWSSLTSLRKVDISGCHFISDSAVVGLSMNCLFLSEIVVLDCSFVTHNAFYFVLS 981
             GI  L   L  LR++D+SG  FI+D ++  LS+NCL LSE+ V DC F+T N    ++ 
Sbjct: 178  DGILELGLKLNKLRRIDLSGNRFITDKSLHFLSLNCLLLSEVKVRDCDFITQNGISLIMR 237

Query: 980  NCRHLNVISVNKIQIPA-----SVPATYIRELRCLDLSDDASISDEFLVSIANACWPLES 816
            NC +LN IS++ + IP+         TY + L  L LS+ + ISDE L  +A AC PL+ 
Sbjct: 238  NCSNLNSISLDGVGIPSIDSFFQESFTYAKSLCELHLSN-SFISDELLYLVAEACLPLKK 296

Query: 815  LSLNWCTDYTFSGISQLLYAYQSLKHLALMNSIFLTDEYVCQLVQYLIHLVSINLSACSH 636
            L+++ C +++F GIS LLY Y+ L +L L  + FLTDE + +L  +L +L  INLS CS 
Sbjct: 297  LTVSHCYNFSFVGISFLLYRYKFLVYLDLEGANFLTDESMIELSNFLCNLSYINLSLCSK 356

Query: 635  LTTSTFYTLITMCPSLEHIDMGGTSVGMFPLCLP-VKNERVKSLNLSSNSYLRDKDLKDI 459
            LT+ TF+ LI  CP L  + M  T++G+    +  + N R+KSL L  N+ L D  L  I
Sbjct: 357  LTSLTFFALIKNCPLLSDVKMERTNLGVEEFMVDLITNPRIKSLKLVGNNNLSDDCLIKI 416

Query: 458  TTACPNIELLDIYSMLHITENGIADVLESCHGIRNLNITDSKGICSLGTGSKLPNLEVLS 279
               CP++++L+I     ITE GI +VL SC  IR+L +    GI +L    +LP LEVL 
Sbjct: 417  ACCCPSLQVLEISYCFGITEEGIKEVLRSCSEIRHLEMNRCVGIKNLDINVELPKLEVLQ 476

Query: 278  VTASGFGERGLETISSRCMGLLKLDMKGCVKATTKDVDELLKQCERLREINLKRCDLVKT 99
            V   G  +  L  I+ RC  LL LD+ GC+  T K V+E+++ C +LRE+NLK CD VK 
Sbjct: 477  VQGPGIDDEALAVIAKRCQMLLHLDLAGCLNVTEKGVNEVVQNCTKLREMNLKWCDNVKV 536

Query: 98   LNLS----SRKVYLKVIPPSTWSFTNYE--HFLSHGCL 3
              ++    SR    K+ PP  +  T+ +   FL HGCL
Sbjct: 537  DMIATMVFSRPSLRKITPPCGFIPTDKQISFFLQHGCL 574


>ref|XP_002273285.1| PREDICTED: EIN3-binding F-box protein 1-like [Vitis vinifera]
          Length = 575

 Score =  376 bits (966), Expect = e-102
 Identities = 233/578 (40%), Positives = 328/578 (56%), Gaps = 23/578 (3%)
 Frame = -3

Query: 1667 MTKICQDLPEECWELIVNKLDHYRH--FESLSLVSKRFLHLTNRLRLKFTVTHQGIRIHG 1494
            M   C DLP ECWELI N L  + H   E +SLV K FL L+N L L  T++   I +  
Sbjct: 1    MEDTCVDLPSECWELIFNHLHRHHHQFLEPVSLVCKSFLSLSNPLLLSLTLSPHTISV-- 58

Query: 1493 TISKFLNRFDQVKTLDLSKFKGNLDLVLNDDVFSSVNLEYLDVSNQESLPV-----LVEN 1329
             + + L RF ++KT+   +F G+LD +L+    S ++L+ L +S Q+S P+     L   
Sbjct: 59   -LPRLLLRFQRLKTIVAEEFCGDLDALLSQIARSHLSLQSLHLSKQKSAPLEGLRQLGST 117

Query: 1328 MKCLKVFKCSNVSRLNDGDLQSISVMMPFLEELDISYPNNTKYYVDLDLDEFTITDVGIE 1149
            MK LK  KC    RL DGDL  IS  +P+LEELDISYP     + +    E  ITD GIE
Sbjct: 118  MKSLKSLKCYKFGRLCDGDLIEISNSLPWLEELDISYPT----FEETGESEGHITDAGIE 173

Query: 1148 ALWSSLTSLRKVDISGCHFISDSAVVGLSMNCLFLSEIVVLDCSFVTHNAFYFVLSNCRH 969
            A+   L  LRK+D+SG +FISD ++V LS NC+FL EIVV DC F+T N   F +SN  +
Sbjct: 174  AMSKKLRELRKIDVSGNYFISDRSLVALSSNCVFLREIVVHDCCFLTPNGIGFAISNSAN 233

Query: 968  LNVISVNKIQIPASVPATYIREL-------RCLDLSDDAS--ISDEFLVSIANACWPLES 816
            L  +SVN++ + +S+  + ++ +       R L   + +S  ISD  L SIA    PL+ 
Sbjct: 234  LVSVSVNRLDLNSSLFRSSLQTIENSFICARALSAIEFSSMVISDALLCSIAKEHLPLKK 293

Query: 815  LSLNWCTDYTFSGISQLLYAYQSLKHLALMNSIFLTDEYVCQLVQYLIHLVSINLSACSH 636
            L+L+ C ++T  GIS +L+AYQ L  L L  + FLTD+ +  L  YL ++ SI L+ACS 
Sbjct: 294  LALSHCQNFTLLGISSILHAYQFLSELDLCGAYFLTDQCMKDLSGYLSNVTSIKLAACSK 353

Query: 635  LTTSTFYTLITMCPSLEHIDMGGTSVGMFPLCLP-VKNERVKSLNLSSNSYLRDKDLKDI 459
            LT STF+ L   C SL  I M  T++G     +  VKN R++SL L+ N  + D  L   
Sbjct: 354  LTNSTFFILTKSCSSLTEIKMERTNLGEEDHVVDLVKNTRIRSLKLAGNERMSDDSLSKF 413

Query: 458  TTACPNIELLDIYSMLHITENGIADVLESCHGIRNLNITDSKGICSLGTGSKLPNLEVLS 279
             + CPN++LLD+     IT  GIA++L+SC  +R+L +    G+ S G  SKL  L VL 
Sbjct: 414  ASVCPNLQLLDVSFCAGITGGGIAEILKSCDDVRHLEVNFCAGVKSFGADSKLSKLGVLK 473

Query: 278  VTASGFGERGLETISSRCMGLLKLDMKGCVKATTKDVDELLKQCERLREINLKRCDLVKT 99
               SG  + GL  +   C  LL LD++GC   +TK V E+++ C+ LREIN+K C  V  
Sbjct: 474  AAGSGICDEGLVMVGQTCPWLLHLDLRGCSGVSTKGVKEIVRSCKGLREINIKGCLDVNA 533

Query: 98   LNLS----SRKVYLKVIPPSTW--SFTNYEHFLSHGCL 3
              ++    SR    K+I P  +   +   +  L HGCL
Sbjct: 534  KFVARMVFSRPSLRKIILPIGFFPGYNQRDFLLRHGCL 571


>ref|XP_002304715.1| predicted protein [Populus trichocarpa] gi|222842147|gb|EEE79694.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  370 bits (950), Expect = e-100
 Identities = 233/571 (40%), Positives = 331/571 (57%), Gaps = 22/571 (3%)
 Frame = -3

Query: 1649 DLPEECWELIVNKLDHYRHFESLSLVSKRFLHLTNRLRLKFTVTHQGIRIHGTISKFLNR 1470
            +LP ECWELI N LDH+RHFESLSLVS +FL +TN LR    ++ Q       +     R
Sbjct: 7    ELPPECWELIFNFLDHHRHFESLSLVSTQFLSITNHLRRSLIISSQTSPF---LPNLFQR 63

Query: 1469 FDQVKTLDLSKFKGNLDLVLNDDVFSSVNLEYLDVSNQESLPV-----LVENMKCLKVFK 1305
            F  +K +++ +F G+L+ +L+    S ++LE L +S+Q+  P+     L   M+ L+   
Sbjct: 64   FPNLKGIEIREFDGDLNFLLHQISNSGLDLESLTLSSQDHFPLMGLRELGLRMRNLRKLS 123

Query: 1304 CSNVSRLNDGDLQSISVMMPFLEELDISYPN-NTKY--YVDLDLDEFT--ITDVGIEALW 1140
            CS ++ L D  L  I    P LE+L+IS+P  N+++     LDL  F+  +TD GI  L 
Sbjct: 124  CSEMNCLQDTHLFEIGNSFPLLEDLNISFPQYNSRFDPIGSLDLQRFSGIVTDEGIIHLA 183

Query: 1139 SSLTSLRKVDISGCHFISDSAVVGLSMNCLFLSEIVVLDCSFVTHNAFYFVLSNCRHLNV 960
              L SL K+D+SG  FISD ++  LS NCL L EIV+ +C F+T N    V+  C +LN 
Sbjct: 184  MKLKSLLKIDLSGNQFISDKSLQFLSENCLLLREIVIRECDFITQNGIGSVMRRCINLNY 243

Query: 959  ISVNKIQIPA-----SVPATYIRELRCLDLSDDASISDEFLVSIANACWPLESLSLNWCT 795
            ISV+ I IP+          + + L  ++LS  + ISDE L SIA+AC PL+ L++  C 
Sbjct: 244  ISVDGIGIPSIELYFQESFVFAKNLSEVNLSH-SFISDELLSSIADACLPLKKLTICHCY 302

Query: 794  DYTFSGISQLLYAYQSLKHLALMNSIFLTDEYVCQLVQYLIHLVSINLSACSHLTTSTFY 615
            D+TF G+S LLY YQ L++L L  + FLTDE +  L ++L  L  INLS CS LT+ TF+
Sbjct: 303  DFTFVGVSYLLYKYQFLEYLDLEGANFLTDESMIDLCEFLRKLTFINLSLCSKLTSLTFF 362

Query: 614  TLITMCPSLEHIDMGGTSVGMFPLCLPVK-NERVKSLNLSSNSYLRDKDLKDITTACPNI 438
             L++ C  L+ + M  T++G+    +    N  V SLNL+ N  L D+ +K I   CPN+
Sbjct: 363  MLVSNCSLLKDVKMERTNLGVEEFLVDFGINPCVMSLNLARNESLSDECIKKIAFCCPNL 422

Query: 437  ELLDIYSMLHITENGIADVLESCHGIRNLNITDSKGICSLGTGSKLPNLEVLSVTASGFG 258
            + L I     ITE GI +VL SC  IR+L +    GI  L    +LP LEV+        
Sbjct: 423  QELKISHCPTITEEGIREVLRSCGEIRHLEMNHCSGIKCLDIDFELPKLEVVQAEGPVLD 482

Query: 257  ERGLETISSRCMGLLKLDMKGCVKATTKDVDELLKQCERLREINLKRCDLVKT----LNL 90
            +  L  I+ RC GLL+LD++GC+  T K V+ +++ C RLREINLK CD VK       +
Sbjct: 483  DEALMMIAKRCHGLLQLDLEGCLNVTIKGVNGVVQSCMRLREINLKWCDNVKVDIIPRMV 542

Query: 89   SSRKVYLKVIPPSTWSFTNYEH--FLSHGCL 3
             SR    K+IPP  +  T+ ++  FL HGCL
Sbjct: 543  FSRPSLRKIIPPCRFIPTDKQNKFFLRHGCL 573


>emb|CAN81984.1| hypothetical protein VITISV_001566 [Vitis vinifera]
          Length = 552

 Score =  363 bits (933), Expect = 6e-98
 Identities = 220/535 (41%), Positives = 307/535 (57%), Gaps = 17/535 (3%)
 Frame = -3

Query: 1667 MTKICQDLPEECWELIVNKLDHYRH--FESLSLVSKRFLHLTNRLRLKFTVTHQGIRIHG 1494
            M   C DLP ECWELI N L  + H   E +SLV K FL L+N L L  T++   I +  
Sbjct: 1    MEDTCVDLPSECWELIFNHLHRHHHQFLEPVSLVCKSFLSLSNPLLLSLTLSPHTISV-- 58

Query: 1493 TISKFLNRFDQVKTLDLSKFKGNLDLVLNDDVFSSVNLEYLDVSNQESLPV-----LVEN 1329
             + + L RF ++KT+   +F G+LD +L+    S ++L+ L +S Q+S P+     L   
Sbjct: 59   -LPRLLLRFQRLKTIVAEEFCGDLDALLSQIARSHLSLQSLHLSKQKSAPLEGLRQLGST 117

Query: 1328 MKCLKVFKCSNVSRLNDGDLQSISVMMPFLEELDISYPNNTKYYVDLDLDEFTITDVGIE 1149
            MK LK  KC    RL DGDL  IS  +P+LEELDISYP       +    E  ITD GIE
Sbjct: 118  MKSLKSLKCYKFGRLCDGDLIEISNSLPWLEELDISYPT----VEETGESEGHITDAGIE 173

Query: 1148 ALWSSLTSLRKVDISGCHFISDSAVVGLSMNCLFLSEIVVLDCSFVTHNAFYFVLSNCRH 969
            A+   L  LRK+D+SG  FISD ++V  S NC+FL EIVV DC F+T N   F +SN  +
Sbjct: 174  AMSKKLRELRKIDVSGNFFISDRSLVAFSSNCVFLREIVVHDCCFLTPNGIGFAISNSAN 233

Query: 968  LNVISVNKIQIPASVPATYIREL-------RCLDLSDDAS--ISDEFLVSIANACWPLES 816
            L  +SVN++ + +S+  + ++ +       R L   + +S  ISD  L SIA    PL+ 
Sbjct: 234  LVSVSVNRLDLNSSLFRSSLQTIENSFICARALSAIEFSSMVISDALLCSIAKXHLPLKK 293

Query: 815  LSLNWCTDYTFSGISQLLYAYQSLKHLALMNSIFLTDEYVCQLVQYLIHLVSINLSACSH 636
            L+L+ C ++T  GIS +L+AYQ L  L L  + FLTD+ +  L  YL ++ SI L+ACS 
Sbjct: 294  LALSHCQNFTLLGISSILHAYQFLSELDLCGAYFLTDQCMKDLSGYLSNVTSIKLAACSK 353

Query: 635  LTTSTFYTLITMCPSLEHIDMGGTSVGMFPLCLP-VKNERVKSLNLSSNSYLRDKDLKDI 459
            LT STF+ L   C SL  I M  T++G     +  VKN R++SL L+ N  + D  L   
Sbjct: 354  LTNSTFFILTKSCSSLTEIKMERTNLGEEBHVVDLVKNTRIRSLKLAGNERMSDDSLSKF 413

Query: 458  TTACPNIELLDIYSMLHITENGIADVLESCHGIRNLNITDSKGICSLGTGSKLPNLEVLS 279
             + CPN++LLD+     IT  GIA++L+SC  +R+L +    G+ S G  SKL  L VL 
Sbjct: 414  ASVCPNLQLLDVSFCAGITGGGIAEILKSCDDVRHLEVNFCAGVKSFGADSKLSKLGVLK 473

Query: 278  VTASGFGERGLETISSRCMGLLKLDMKGCVKATTKDVDELLKQCERLREINLKRC 114
               SG  +  L  +   C  LL LD++GC   +TK V E+++ C+ LREIN+K C
Sbjct: 474  AAGSGICDERLVMVGQTCPWLLHLDLRGCSGVSTKGVKEIVRSCKGLREINIKGC 528


>ref|NP_565242.1| leucine-rich repeats-containing protein [Arabidopsis thaliana]
            gi|6730724|gb|AAF27114.1|AC018849_2 hypothetical protein;
            8015-9751 [Arabidopsis thaliana]
            gi|21592320|gb|AAM64271.1| unknown [Arabidopsis thaliana]
            gi|110739194|dbj|BAF01513.1| hypothetical protein
            [Arabidopsis thaliana] gi|195546962|gb|ACG49251.1|
            At1g80630 [Arabidopsis thaliana]
            gi|332198308|gb|AEE36429.1| leucine-rich
            repeats-containing protein [Arabidopsis thaliana]
          Length = 578

 Score =  338 bits (868), Expect = 2e-90
 Identities = 224/564 (39%), Positives = 318/564 (56%), Gaps = 15/564 (2%)
 Frame = -3

Query: 1649 DLPEECWELIVNKLDH--YRHFESLSLVSKRFLHLTNRLRLKFTVTHQGIRIHGTISKFL 1476
            DLPEECWELI   +D   YR  ES+SLVS  FL +TNR+R  F VT + + +   +++ L
Sbjct: 2    DLPEECWELICKAIDEDDYRFLESVSLVSTLFLSITNRVRSTFVVTDRAVPL---LNRHL 58

Query: 1475 NRFDQVKTLDLSKFKGNLDLVLNDDVFSSVNLEYLDVSNQESLPVLVENMKCLKVFKCSN 1296
             RF  +K +  S F  +L+ +L     S ++ E +DVS     P     MK +K  KC  
Sbjct: 59   LRFRNLKRIRFSDFTQDLNSILLQVSRSGLDFESVDVSQTRYFPDF--EMKNVKELKCYG 116

Query: 1295 VSRLNDGDLQSISVMMPFLEELDISYPNNTKYYVDLDLDEFTITDVGIEALWSSLTSLRK 1116
            V   +D DL SI V  P LE+LDISYPN++   V         +D G+  L S+L  L K
Sbjct: 117  VGGFSDSDLVSIGVNFPLLEKLDISYPNSSPSRV---------SDSGVIELSSNLKGLLK 167

Query: 1115 VDISGCHFISDSAVVGLSMNCLFLSEIVVLDCSFVTHNAFYFVLSNCRHLNVISVNKIQI 936
            ++ISG  FI+D +++ LS NCL L EI+  DC F++ +   FVL N R+L  +++N I +
Sbjct: 168  INISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCIKFVLRNSRNLESLAINGIGL 227

Query: 935  -PASVPAT----YIRELRCLDLSDDASISDEFLVSIANACWPLESLSLNWCTDYTFSGIS 771
             P     T    + R L  LDLSD + +SD+ L  IA+A  PL+ L L+ C  +TF GI 
Sbjct: 228  RPRESLLTDAFLFARCLTELDLSD-SFLSDDLLCLIASAKLPLKKLLLSDCHGFTFDGIL 286

Query: 770  QLLYAYQSLKHLALMNSIFLTDEYVCQLVQYLIHLVSINLSACSHLTTSTFYTLITMCPS 591
             LL  YQSL HL L  + FL+DE V +L  +   L  +NLS CS LT   F+++I  C S
Sbjct: 287  YLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFSIIERCVS 346

Query: 590  LEHIDMGGTSVGMFPLCLPVKNER--VKSLNLSSNSYLRDKDLKDITTACPNIELLDIYS 417
            L  + M GT+ G+       K+ +  VK L LS N  L D+ L+ I+  CP IE LD+  
Sbjct: 347  LRCMIMVGTNFGVEEYTKDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPFIESLDVAQ 406

Query: 416  MLHITENGIADVLESCHGIRNLNITDSKGICSLG-TGSKLPNLEVLSVTASGFGERGLET 240
               IT +GI +V  +C  +R+L+I+   GI SLG    +LP LE L    +   +  L+ 
Sbjct: 407  CPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVVDFELPKLESLRACGTWIDDEALDM 466

Query: 239  ISSRCMGLLKLDMKGCVKATTKDVDELLKQCERLREINLKRCDLVK---TLNLSSRKVYL 69
            IS +C GLL LD++GC+  +++ V E+++ C RLREINLK C+  K   T  + +     
Sbjct: 467  ISKKCRGLLHLDLQGCLNVSSRGVKEVVQSCIRLREINLKYCEADKKMYTWMVFANPSLR 526

Query: 68   KVIPPSTWSFTN--YEHFLSHGCL 3
            K++PP  +S T      FL HGC+
Sbjct: 527  KIVPPCGFSPTKALKNFFLRHGCV 550


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