BLASTX nr result

ID: Bupleurum21_contig00020855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020855
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   109   3e-22
ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_003619081.1| HAT family dimerization domain containing pr...    96   4e-18
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
 Frame = -2

Query: 355 RTSKKASYVWDHFTKNE--DPKNPRNVCNYCGVSYARQKKRNGTTNMRTHLESQCKKYPL 182
           + +K  S VWDHFTK +  DP  PR  CNYCG+ YA   KRN T+NM+ HL S C+K+P 
Sbjct: 30  KPTKPPSEVWDHFTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKAHLASGCQKHPF 89

Query: 181 RFNRDKQKMLNFTINRESGAKVNNTG-LLKNHVYKYEECRKALAKMIIRDELSFRSVEG 8
           R    KQK L+F    + G    ++G  L    +  E CRK LA+MII DEL+FR V+G
Sbjct: 90  RCKDPKQKTLSFQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQG 148


>ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|222869650|gb|EEF06781.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/132 (46%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
 Frame = -2

Query: 379 EGTPLSIPRT------SKKASYVWDHFTKNE-DPKNPRNVCNYCGVSYARQKKRNGTTNM 221
           +G  L +P +       KK S +WDHFTK + DP  PR  CNYCG  YA     NGT+NM
Sbjct: 42  KGKQLQVPASRKRNVDDKKKSQIWDHFTKLDGDPTTPRAECNYCGKDYACHTIINGTSNM 101

Query: 220 RTHLESQCKKYPLRFNRDKQKMLNFTINRESGAKVNNT-GLLKNHVYKYEECRKALAKMI 44
            +HL+  CKK+P   ++ KQK+L    N+  G   + + G LK   Y Y+ECRKAL KM+
Sbjct: 102 WSHLKV-CKKFPFVVDK-KQKILVLEPNKVGGELGDRSVGTLKAIGYDYDECRKALVKMV 159

Query: 43  IRDELSFRSVEG 8
           I DEL F  VEG
Sbjct: 160 IIDELPFNFVEG 171


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = -2

Query: 346 KKASYVWDHFTKNE-DPKNPRNVCNYCGVSYARQKKRNGTTNMRTHLESQCKKYPLRFNR 170
           +K S +WDHFTK + DPK PR  CNYCG  YA     NGT+NM +HL+  CKK+P   ++
Sbjct: 57  RKKSQIWDHFTKLDVDPKAPRAECNYCGKHYACHTIVNGTSNMWSHLKV-CKKFPFVVDK 115

Query: 169 DKQKMLNFTINRESGAK-VNNTGLLKNHVYKYEECRKALAKMIIRDELSFRSVEG 8
            KQK+L      E+G     N G LK   Y Y+ECR+ LAKM+I DEL F  VEG
Sbjct: 116 -KQKVLVLESKIENGELGEQNVGSLKAIGYNYDECRQTLAKMVIIDELPFNFVEG 169


>ref|XP_003619081.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355494096|gb|AES75299.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 213

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/110 (46%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
 Frame = -2

Query: 355 RTSKKASYVWDHFTKNEDPKNPRNVCNYCGVSYARQKKRNGTTNMRTHLESQCKKYPLRF 176
           +  K  S+VW HFTK++ P NPR  CN+C  +YA    +NGTTN+R HL SQCKK+P   
Sbjct: 98  KACKTRSWVWKHFTKDDHPTNPRATCNWCAATYAADSHKNGTTNLRIHLLSQCKKFPKES 157

Query: 175 NRDKQKMLNF-TINRESGAKVNNTGLLKNHV-YKYEECRKALAKMIIRDE 32
               Q+ L    + +E G   N TG     V +  E CRKALA+MII DE
Sbjct: 158 LDPSQQTLTLQQLKKEDG---NGTGSTLAAVHFDAETCRKALARMIIVDE 204


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/115 (47%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
 Frame = -2

Query: 346 KKASYVWDHFTKNE-DPKNPRNVCNYCGVSYARQKKRNGTTNMRTHLESQCKKYPLRFNR 170
           KK S +WDHFTK + DP   R   NYCG  YA     NGT+NM +HL+  CKK+P    +
Sbjct: 57  KKKSQIWDHFTKLDGDPTTSRAEYNYCGKDYACHTIINGTSNMWSHLKV-CKKFPFVVIK 115

Query: 169 DKQKMLNFTINRESGAKVNNT-GLLKNHVYKYEECRKALAKMIIRDELSFRSVEG 8
            KQK+L    N+  G   + + G LK   Y+Y+ECRKAL KM+I DEL F  +EG
Sbjct: 116 -KQKILVLEPNKVGGELGDRSVGTLKAIGYEYDECRKALVKMVIIDELPFNFMEG 169


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