BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020849
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi...   272   4e-71
emb|CBI36158.3| unnamed protein product [Vitis vinifera]              272   4e-71
ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   226   3e-57
ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containi...   226   3e-57
ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g...   225   5e-57

>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  272 bits (695), Expect = 4e-71
 Identities = 130/171 (76%), Positives = 151/171 (88%)
 Frame = +3

Query: 117 MMQGRVGLRRAICTMPYICQRIKQTESDIVQMFRLSSPREETEHLSMNRTAFRRNSSARV 296
           M+ G + LRR I T+P++ QRIKQTES+IVQMF+LSSP++E + L MN+   R N S R 
Sbjct: 1   MISGSIPLRRMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRT 60

Query: 297 LDERFIRILKIFKWSPDAEKALEVLKLRVDHRLVRQVLSVDVEINVKIQFFKWAGKRRNF 476
           LDERFIRILKIFKW PDAEKALEVLKL+VDHRLVR+VL +DVEI+VKIQFFKWAGKRRNF
Sbjct: 61  LDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNF 120

Query: 477 EHDSTTYMALIHCLDDVGLVGEMWKTIQEMVRGTCLMGPADLSEIVKILGK 629
           EHDSTTYMALIHCLD+ G++GEMWKTIQEMVR TC++GPADLSEIVK+LGK
Sbjct: 121 EHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGK 171


>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  272 bits (695), Expect = 4e-71
 Identities = 130/171 (76%), Positives = 151/171 (88%)
 Frame = +3

Query: 117 MMQGRVGLRRAICTMPYICQRIKQTESDIVQMFRLSSPREETEHLSMNRTAFRRNSSARV 296
           M+ G + LRR I T+P++ QRIKQTES+IVQMF+LSSP++E + L MN+   R N S R 
Sbjct: 1   MISGSIPLRRMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRT 60

Query: 297 LDERFIRILKIFKWSPDAEKALEVLKLRVDHRLVRQVLSVDVEINVKIQFFKWAGKRRNF 476
           LDERFIRILKIFKW PDAEKALEVLKL+VDHRLVR+VL +DVEI+VKIQFFKWAGKRRNF
Sbjct: 61  LDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNF 120

Query: 477 EHDSTTYMALIHCLDDVGLVGEMWKTIQEMVRGTCLMGPADLSEIVKILGK 629
           EHDSTTYMALIHCLD+ G++GEMWKTIQEMVR TC++GPADLSEIVK+LGK
Sbjct: 121 EHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGK 171


>ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  226 bits (575), Expect = 3e-57
 Identities = 108/163 (66%), Positives = 133/163 (81%)
 Frame = +3

Query: 141 RRAICTMPYICQRIKQTESDIVQMFRLSSPREETEHLSMNRTAFRRNSSARVLDERFIRI 320
           +R+I ++  +  RIKQTE++IVQMFR+S+P  E  + S NR   RR+ S R LDERFIRI
Sbjct: 9   KRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRTLDERFIRI 68

Query: 321 LKIFKWSPDAEKALEVLKLRVDHRLVRQVLSVDVEINVKIQFFKWAGKRRNFEHDSTTYM 500
           LKIFKW  DAEKA+EVLKL+VDHRLV QVL +DVEI  KIQFFKWAGKR++F+HDSTTYM
Sbjct: 69  LKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYM 128

Query: 501 ALIHCLDDVGLVGEMWKTIQEMVRGTCLMGPADLSEIVKILGK 629
           ALI CL++ GLV EMW+TIQ+M+R  C +GPA+ SEI+KILGK
Sbjct: 129 ALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGK 171


>ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  226 bits (575), Expect = 3e-57
 Identities = 108/163 (66%), Positives = 133/163 (81%)
 Frame = +3

Query: 141 RRAICTMPYICQRIKQTESDIVQMFRLSSPREETEHLSMNRTAFRRNSSARVLDERFIRI 320
           +R+I ++  +  RIKQTE++IVQMFR+S+P  E  + S NR   RR+ S R LDERFIRI
Sbjct: 9   KRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRTLDERFIRI 68

Query: 321 LKIFKWSPDAEKALEVLKLRVDHRLVRQVLSVDVEINVKIQFFKWAGKRRNFEHDSTTYM 500
           LKIFKW  DAEKA+EVLKL+VDHRLV QVL +DVEI  KIQFFKWAGKR++F+HDSTTYM
Sbjct: 69  LKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYM 128

Query: 501 ALIHCLDDVGLVGEMWKTIQEMVRGTCLMGPADLSEIVKILGK 629
           ALI CL++ GLV EMW+TIQ+M+R  C +GPA+ SEI+KILGK
Sbjct: 129 ALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGK 171


>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
           gi|357455013|ref|XP_003597787.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355486828|gb|AES68031.1| Beta-D-galactosidase
           [Medicago truncatula] gi|355486835|gb|AES68038.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 639

 Score =  225 bits (574), Expect = 5e-57
 Identities = 112/172 (65%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = +3

Query: 117 MMQGRVGLRRAICTMPYICQRIKQTESDIVQMFRLSSPREETEHLSMN-RTAFRRNSSAR 293
           M+ G V  RR I T     QR+KQTE++IV+MFRL   +EE  ++ M  R   R++ +AR
Sbjct: 1   MLPGFVTARRFISTSTPFTQRLKQTENEIVKMFRLPDSQEENHYVPMEGRRVLRKDPNAR 60

Query: 294 VLDERFIRILKIFKWSPDAEKALEVLKLRVDHRLVRQVLSVDVEINVKIQFFKWAGKRRN 473
            LDERFIRILKIFKW PDAEKALEVLKL++D RLVR+VL +DVE++VKIQFFKWAGK+RN
Sbjct: 61  KLDERFIRILKIFKWGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVKIQFFKWAGKKRN 120

Query: 474 FEHDSTTYMALIHCLDDVGLVGEMWKTIQEMVRGTCLMGPADLSEIVKILGK 629
           FEHDSTTYMALI CLD+  LVGE+W+TIQ+MV+  C +GP++LSEIVKILG+
Sbjct: 121 FEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGR 172