BLASTX nr result

ID: Bupleurum21_contig00020839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020839
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...   109   3e-22
emb|CBI19167.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002302301.1| methyl binding domain protein [Populus trich...    96   2e-18
ref|XP_002306571.1| methyl binding domain protein [Populus trich...    96   3e-18
ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/99 (52%), Positives = 69/99 (69%)
 Frame = -3

Query: 328 RTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVDASLFGDYLPKGWNISISLKRKEKQVWL 149
           RTEG++T+                    RK+V+AS FGD LP+GW + +S+KRKE +VWL
Sbjct: 213 RTEGLTTEEELLGFLTGLSGQWGSRRKKRKIVEASDFGDVLPQGWKLLLSMKRKEGRVWL 272

Query: 148 FCRRYISPSGRQFISCKEISSYLMSLSGLLDNKQPDSSH 32
           FCRRYISP+G+QF+SCKE+SS L+SLSGL D +QP+  H
Sbjct: 273 FCRRYISPNGQQFVSCKEVSSCLLSLSGLQDARQPNYGH 311


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/99 (52%), Positives = 69/99 (69%)
 Frame = -3

Query: 328 RTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVDASLFGDYLPKGWNISISLKRKEKQVWL 149
           RTEG++T+                    RK+V+AS FGD LP+GW + +S+KRKE +VWL
Sbjct: 176 RTEGLTTEEELLGFLTGLSGQWGSRRKKRKIVEASDFGDVLPQGWKLLLSMKRKEGRVWL 235

Query: 148 FCRRYISPSGRQFISCKEISSYLMSLSGLLDNKQPDSSH 32
           FCRRYISP+G+QF+SCKE+SS L+SLSGL D +QP+  H
Sbjct: 236 FCRRYISPNGQQFVSCKEVSSCLLSLSGLQDARQPNYGH 274


>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/99 (48%), Positives = 62/99 (62%)
 Frame = -3

Query: 328 RTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVDASLFGDYLPKGWNISISLKRKEKQVWL 149
           RTEGM   A                   R++VDASLFGD LP GW +SI +K++  +VWL
Sbjct: 270 RTEGMQLKAEFLGFLEGFEGEWGSMRKKRRIVDASLFGDVLPIGWKLSICIKKQAGRVWL 329

Query: 148 FCRRYISPSGRQFISCKEISSYLMSLSGLLDNKQPDSSH 32
            C RYISP+G+QF+SCKE+SSYL+S SGL D  + +  H
Sbjct: 330 ACTRYISPNGQQFVSCKEVSSYLLSFSGLHDVSRLNFGH 368


>ref|XP_002306571.1| methyl binding domain protein [Populus trichocarpa]
           gi|222856020|gb|EEE93567.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1248

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/99 (48%), Positives = 62/99 (62%)
 Frame = -3

Query: 328 RTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVDASLFGDYLPKGWNISISLKRKEKQVWL 149
           RTEGM   A                   R++VDASLFGD LP GW +SI +K++  +VWL
Sbjct: 269 RTEGMQLKAEFLGFLEGFEGEWGSTRKKRRIVDASLFGDALPIGWKLSICVKKQAGRVWL 328

Query: 148 FCRRYISPSGRQFISCKEISSYLMSLSGLLDNKQPDSSH 32
            C RYISP+G QF+SCKE+SSYL+S SGL D ++ +  H
Sbjct: 329 ACTRYISPNGLQFVSCKEVSSYLLSFSGLHDVRRSNFDH 367


>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/101 (46%), Positives = 61/101 (60%)
 Frame = -3

Query: 328 RTEGMSTDAXXXXXXXXXXXXXXXXXXXRKVVDASLFGDYLPKGWNISISLKRKEKQVWL 149
           RTEGM  +                    RK+VDA  FGD+LP GW + + LKRKE + W+
Sbjct: 223 RTEGMEKEEELLGFFRELGGQWCSRRKKRKIVDAGEFGDFLPVGWKLILGLKRKEGRAWV 282

Query: 148 FCRRYISPSGRQFISCKEISSYLMSLSGLLDNKQPDSSHAG 26
           +CRRY+SPSG+QFISCK++S+YL SL G  D +Q    H G
Sbjct: 283 YCRRYLSPSGQQFISCKDVSAYLQSLVGPYDAQQA-KDHTG 322


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